RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CCL21O00585 134 aa9.85□□□□□ -0.83
RTFDC1-207ENST00000477573 TFF1P04155 84 aa9.85□□□□□ -0.83
RTFDC1-207ENST00000477573 FBXL19-AS1Q494R0 122 aa9.85□□□□□ -0.83
RTFDC1-207ENST00000477573 DEFB121Q5J5C9 76 aa9.85□□□□□ -0.83
RTFDC1-207ENST00000477573 ZNF714Q96N38 554 aa9.85□□□□□ -0.83
RTFDC1-207ENST00000477573 TRAV40A0A0B4J280 105 aa9.85□□□□□ -0.83
RTFDC1-207ENST00000477573 EDN2P20800 178 aa9.85□□□□□ -0.83
RTFDC1-207ENST00000477573 RNASE6Q93091 150 aaKnown RBP9.85□□□□□ -0.83
RTFDC1-207ENST00000477573 LINC00527Q9UJ94 153 aa9.85□□□□□ -0.83
RTFDC1-207ENST00000477573 ZNF256Q9Y2P7 627 aaPredicted RBP9.85□□□□□ -0.83
RTFDC1-207ENST00000477573 ZNF785A8K8V0 405 aa9.84□□□□□ -0.83
RTFDC1-207ENST00000477573 SFTA2Q6UW10 78 aa9.84□□□□□ -0.83
RTFDC1-207ENST00000477573 TEX49A0A1B0GTD5 131 aa9.84□□□□□ -0.83
RTFDC1-207ENST00000477573 CXCL5P42830 114 aa9.84□□□□□ -0.83
RTFDC1-207ENST00000477573 TMEM86BQ8N661 226 aa9.84□□□□□ -0.83
RTFDC1-207ENST00000477573 ZNRF1Q8ND25 227 aa9.84□□□□□ -0.83
RTFDC1-207ENST00000477573 FXYD5Q96DB9 178 aa9.84□□□□□ -0.83
RTFDC1-207ENST00000477573 NXT2Q9NPJ8 142 aaKnown RBP9.84□□□□□ -0.83
RTFDC1-207ENST00000477573 PYGO1Q9Y3Y4 419 aa9.84□□□□□ -0.83
RTFDC1-207ENST00000477573 TRBV6-1A0A0K0K1D8 114 aa9.83□□□□□ -0.84
RTFDC1-207ENST00000477573 TRBV10-2A0A0K0K1G8 114 aa9.83□□□□□ -0.84
RTFDC1-207ENST00000477573 RPL35AP18077 110 aaKnown RBP9.83□□□□□ -0.84
RTFDC1-207ENST00000477573 FXYD7P58549 80 aa9.83□□□□□ -0.84
RTFDC1-207ENST00000477573 ERVK-16P61578 105 aa9.83□□□□□ -0.84
RTFDC1-207ENST00000477573 CCL8P80075 99 aa9.83□□□□□ -0.84
RTFDC1-207ENST00000477573 ATXN8Q156A1 80 aa9.83□□□□□ -0.84
RTFDC1-207ENST00000477573 C2orf48Q96LS8 159 aa9.83□□□□□ -0.84
RTFDC1-207ENST00000477573 GNG12Q9UBI6 72 aa9.83□□□□□ -0.84
RTFDC1-207ENST00000477573 CHD8Q9HCK8 2581 aa9.83□□□□□ -0.84
RTFDC1-207ENST00000477573 MRPS12O15235 138 aaKnown RBP9.82□□□□□ -0.84
RTFDC1-207ENST00000477573 LEPP41159 167 aa9.82□□□□□ -0.84
RTFDC1-207ENST00000477573 DYNLRB1Q9NP97 96 aa9.82□□□□□ -0.84
RTFDC1-207ENST00000477573 MRPL35Q9NZE8 188 aaKnown RBP9.82□□□□□ -0.84
RTFDC1-207ENST00000477573 SRSF9Q13242 221 aaKnown RBP eCLIP9.82□□□□□ -0.84
RTFDC1-207ENST00000477573 LINC01620Q4KN68 170 aa9.82□□□□□ -0.84
RTFDC1-207ENST00000477573 FAM201AQ5SY85 155 aa9.82□□□□□ -0.84
RTFDC1-207ENST00000477573 DEFB108BQ8NET1 73 aa9.82□□□□□ -0.84
RTFDC1-207ENST00000477573 PRO1854Q9UHT4 67 aa9.82□□□□□ -0.84
RTFDC1-207ENST00000477573 NCOR2Q9Y618 2525 aa9.82□□□□□ -0.84
RTFDC1-207ENST00000477573 IGKV1OR2-108A0A075B7D4 117 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 LINC00473A8K010 186 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 ATOX1O00244 68 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 PYYP10082 97 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 MRPL51Q4U2R6 128 aaKnown RBP9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 WFDC3Q8IUB2 231 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 C8orf31Q8N9H6 132 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 DCTN5Q9BTE1 182 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 ROS1P08922 2347 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 IGHV3-43A0A0B4J1X8 118 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 OXTP01178 125 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 IGHV3-43DP0DP04 118 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 TMEM30BQ3MIR4 351 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 CEMP1Q6PRD7 247 aaPredicted RBP9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 Q86TA4 180 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 GAFA1Q96PS6 74 aa9.81□□□□□ -0.84
RTFDC1-207ENST00000477573 DSCAMO60469 2012 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 E7EQL1 145 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 H3BT86 120 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 TCRAP04437 139 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 CKS2P33552 79 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 SRSF12Q8WXF0 261 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 CCL13Q99616 98 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 TRAV13-1A0A0B4J241 112 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 PGPA6NDG6 321 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 C15orf61A6NNL5 157 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 DEFB108AA8MXU0 73 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 COX7A2P2O60397 106 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 CRIP2P52943 208 aaPredicted RBP9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 C10orf113Q5VZT2 155 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 LINC00643Q86TS7 51 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 C9orf85Q96MD7 179 aa9.8□□□□□ -0.84
RTFDC1-207ENST00000477573 ATRXP46100 2492 aa9.79□□□□□ -0.84
RTFDC1-207ENST00000477573 ANKHD1Q8IWZ3 2542 aaKnown RBP9.79□□□□□ -0.84
RTFDC1-207ENST00000477573 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
RTFDC1-207ENST00000477573 MORN5Q5VZ52 161 aa9.79□□□□□ -0.84
RTFDC1-207ENST00000477573 LINC01560Q8TB33 94 aa9.79□□□□□ -0.84
RTFDC1-207ENST00000477573 TMEM178BH3BS89 294 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 CFC1BP0CG36 223 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 CFC1P0CG37 223 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 CGB3P0DN86 165 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 CGB7P0DN87 165 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 PFN2P35080 140 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 LOXL3P58215 753 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 ZCCHC24Q8N2G6 241 aaKnown RBP9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 Q8N8P6 123 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 SLC25A39Q9BZJ4 359 aaPredicted RBP9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 hADV29S1A0JD25 119 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 INS-IGF2F8WCM5 200 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 LY6LH3BQJ8 138 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 J3QQQ9 107 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 ZZEF1O43149 2961 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 SLC25A16P16260 332 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 ADORA2A-AS1P86434 159 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 FAM53AQ6NSI3 398 aaPredicted RBP9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 SCGB1D4Q6XE38 83 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 LINC00336Q6ZUF6 198 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 GOLT1AQ6ZVE7 132 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 FAM216BQ8N7L0 139 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 CCL17Q92583 94 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms