RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ANXA2RQ3ZCQ2 193 aa11.03□□□□□ -0.64
SEC13-215ENST00000477547 RNASE8Q8TDE3 154 aaKnown RBP11.03□□□□□ -0.64
SEC13-215ENST00000477547 STAB2Q8WWQ8 2551 aa11.03□□□□□ -0.64
SEC13-215ENST00000477547 TRGV11A0A075B6L2 103 aa11.02□□□□□ -0.65
SEC13-215ENST00000477547 TMEM189A5PLL7 270 aa11.02□□□□□ -0.65
SEC13-215ENST00000477547 FABP5P3A8MUU1 101 aa11.02□□□□□ -0.65
SEC13-215ENST00000477547 AZU1P20160 251 aa11.02□□□□□ -0.65
SEC13-215ENST00000477547 CRIP1P50238 77 aa11.02□□□□□ -0.65
SEC13-215ENST00000477547 EMP1P54849 157 aa11.02□□□□□ -0.65
SEC13-215ENST00000477547 SDF2L1Q9HCN8 221 aa11.02□□□□□ -0.65
SEC13-215ENST00000477547 C11orf21Q9P2W6 132 aa11.02□□□□□ -0.65
SEC13-215ENST00000477547 LINC00862A6NCI5 91 aa11.01□□□□□ -0.65
SEC13-215ENST00000477547 M0R036 132 aa11.01□□□□□ -0.65
SEC13-215ENST00000477547 SFTA3P0C7M3 94 aa11.01□□□□□ -0.65
SEC13-215ENST00000477547 ZNF415Q09FC8 603 aa11.01□□□□□ -0.65
SEC13-215ENST00000477547 TDRG1Q3Y452 100 aa11.01□□□□□ -0.65
SEC13-215ENST00000477547 ZNF493Q6ZR52 646 aa11.01□□□□□ -0.65
SEC13-215ENST00000477547 KCNS1Q96KK3 526 aa11.01□□□□□ -0.65
SEC13-215ENST00000477547 TP53TG3Q9ULZ0 132 aa11.01□□□□□ -0.65
SEC13-215ENST00000477547 HUWE1Q7Z6Z7 4374 aaKnown RBP11□□□□□ -0.65
SEC13-215ENST00000477547 ORM1P02763 201 aa11□□□□□ -0.65
SEC13-215ENST00000477547 TYMSP04818 313 aa11□□□□□ -0.65
SEC13-215ENST00000477547 FAM74A3Q4VXF1 159 aa11□□□□□ -0.65
SEC13-215ENST00000477547 SOHLH1Q5JUK2 328 aa11□□□□□ -0.65
SEC13-215ENST00000477547 CASC10Q5T4H9 136 aa11□□□□□ -0.65
SEC13-215ENST00000477547 UQCC3Q6UW78 93 aa11□□□□□ -0.65
SEC13-215ENST00000477547 BIN3Q9NQY0 253 aa11□□□□□ -0.65
SEC13-215ENST00000477547 LYSTQ99698 3801 aa10.99□□□□□ -0.65
SEC13-215ENST00000477547 PLAC8L1A1L4L8 177 aa10.99□□□□□ -0.65
SEC13-215ENST00000477547 SNURFLB1AK76 121 aa10.99□□□□□ -0.65
SEC13-215ENST00000477547 B4DEV8 164 aa10.99□□□□□ -0.65
SEC13-215ENST00000477547 K7EN84 100 aa10.99□□□□□ -0.65
SEC13-215ENST00000477547 OR5I1Q13606 314 aa10.99□□□□□ -0.65
SEC13-215ENST00000477547 LINC01559Q495D7 138 aa10.99□□□□□ -0.65
SEC13-215ENST00000477547 IBA57Q5T440 356 aaKnown RBP10.99□□□□□ -0.65
SEC13-215ENST00000477547 C11orf72Q8NBR9 251 aa10.99□□□□□ -0.65
SEC13-215ENST00000477547 OCC1Q8TAD7 63 aa10.99□□□□□ -0.65
SEC13-215ENST00000477547 EDA2RQ9HAV5 297 aa10.99□□□□□ -0.65
SEC13-215ENST00000477547 GSN-AS1Q9NRJ2 163 aa10.99□□□□□ -0.65
SEC13-215ENST00000477547 LY96Q9Y6Y9 160 aa10.99□□□□□ -0.65
SEC13-215ENST00000477547 HYDINQ4G0P3 5121 aa10.98□□□□□ -0.65
SEC13-215ENST00000477547 TMSB15BA0A087X1C1 80 aa10.98□□□□□ -0.65
SEC13-215ENST00000477547 IGKV3D-20A0A0C4DH25 116 aa10.98□□□□□ -0.65
SEC13-215ENST00000477547 TCL1AP56279 114 aa10.98□□□□□ -0.65
SEC13-215ENST00000477547 LINC01551Q86U37 167 aa10.98□□□□□ -0.65
SEC13-215ENST00000477547 DAZAP1Q96EP5 407 aaKnown RBP10.98□□□□□ -0.65
SEC13-215ENST00000477547 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
SEC13-215ENST00000477547 CELA1Q9UNI1 258 aa10.98□□□□□ -0.65
SEC13-215ENST00000477547 IGHV3-16A0A0C4DH30 117 aa10.97□□□□□ -0.65
SEC13-215ENST00000477547 RPL19P84098 196 aaKnown RBP10.97□□□□□ -0.65
SEC13-215ENST00000477547 FAM222AQ5U5X8 452 aa10.97□□□□□ -0.65
SEC13-215ENST00000477547 IL17DQ8TAD2 202 aa10.97□□□□□ -0.65
SEC13-215ENST00000477547 TEX48A0A1B0GUV7 120 aa10.96□□□□□ -0.65
SEC13-215ENST00000477547 C19orf71A6NCJ1 209 aa10.96□□□□□ -0.65
SEC13-215ENST00000477547 KRBOX1C9JBD0 128 aa10.96□□□□□ -0.65
SEC13-215ENST00000477547 GNRH2O43555 120 aa10.96□□□□□ -0.65
SEC13-215ENST00000477547 P01737 135 aa10.96□□□□□ -0.65
SEC13-215ENST00000477547 ASIPP42127 132 aa10.96□□□□□ -0.65
SEC13-215ENST00000477547 ADIRFQ15847 76 aa10.96□□□□□ -0.65
SEC13-215ENST00000477547 TMEM241Q24JQ0 296 aa10.96□□□□□ -0.65
SEC13-215ENST00000477547 NOP10Q9NPE3 64 aaKnown RBP10.96□□□□□ -0.65
SEC13-215ENST00000477547 MDFICQ9P1T7 246 aa10.96□□□□□ -0.65
SEC13-215ENST00000477547 DKK2Q9UBU2 259 aa10.96□□□□□ -0.65
SEC13-215ENST00000477547 TIMM8BQ9Y5J9 83 aaPredicted RBP10.96□□□□□ -0.65
SEC13-215ENST00000477547 MUC4Q99102 2169 aa10.95□□□□□ -0.66
SEC13-215ENST00000477547 LCE6AA0A183 80 aa10.95□□□□□ -0.66
SEC13-215ENST00000477547 H3BVH4 76 aa10.95□□□□□ -0.66
SEC13-215ENST00000477547 SPART-AS1P0CW21 52 aa10.95□□□□□ -0.66
SEC13-215ENST00000477547 S100A4P26447 101 aaKnown RBP10.95□□□□□ -0.66
SEC13-215ENST00000477547 OR2D3Q8NGH3 330 aa10.95□□□□□ -0.66
SEC13-215ENST00000477547 MUC7Q8TAX7 377 aa10.95□□□□□ -0.66
SEC13-215ENST00000477547 RNASE7Q9H1E1 156 aaKnown RBP10.95□□□□□ -0.66
SEC13-215ENST00000477547 GRIFINA4D1Z8 144 aa10.94□□□□□ -0.66
SEC13-215ENST00000477547 CXorf65A6NEN9 183 aa10.94□□□□□ -0.66
SEC13-215ENST00000477547 LYRM9A8MSI8 78 aa10.94□□□□□ -0.66
SEC13-215ENST00000477547 RPL23P62829 140 aaKnown RBP10.94□□□□□ -0.66
SEC13-215ENST00000477547 C11orf45Q8TAV5 145 aa10.94□□□□□ -0.66
SEC13-215ENST00000477547 NACAE9PAV3 2078 aa10.93□□□□□ -0.66
SEC13-215ENST00000477547 TMEM218A2RU14 115 aa10.93□□□□□ -0.66
SEC13-215ENST00000477547 CXCL1P09341 107 aa10.93□□□□□ -0.66
SEC13-215ENST00000477547 ADCYAP1P18509 176 aa10.93□□□□□ -0.66
SEC13-215ENST00000477547 DAZ2Q13117 558 aaKnown RBP10.93□□□□□ -0.66
SEC13-215ENST00000477547 NUDT10Q8NFP7 164 aa10.93□□□□□ -0.66
SEC13-215ENST00000477547 ISOC2Q96AB3 205 aa10.93□□□□□ -0.66
SEC13-215ENST00000477547 NUDT11Q96G61 164 aa10.93□□□□□ -0.66
SEC13-215ENST00000477547 RPP21Q9H633 154 aaKnown RBP10.93□□□□□ -0.66
SEC13-215ENST00000477547 MRPL16Q9NX20 251 aaKnown RBP10.93□□□□□ -0.66
SEC13-215ENST00000477547 TRGV1A0A0A0MS02 117 aa10.92□□□□□ -0.66
SEC13-215ENST00000477547 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
SEC13-215ENST00000477547 NANOS2P60321 138 aaKnown RBP10.92□□□□□ -0.66
SEC13-215ENST00000477547 ERVFC1-1P60608 527 aa10.92□□□□□ -0.66
SEC13-215ENST00000477547 RPS20P60866 119 aaKnown RBP10.92□□□□□ -0.66
SEC13-215ENST00000477547 DAD1P61803 113 aa10.92□□□□□ -0.66
SEC13-215ENST00000477547 Q6ZTI0 123 aa10.92□□□□□ -0.66
SEC13-215ENST00000477547 FAM231DQ6ZW35 169 aa10.92□□□□□ -0.66
SEC13-215ENST00000477547 C9orf85Q96MD7 179 aa10.92□□□□□ -0.66
SEC13-215ENST00000477547 SPXQ9BT56 116 aa10.92□□□□□ -0.66
SEC13-215ENST00000477547 STARD9Q9P2P6 4700 aa10.92□□□□□ -0.66
SEC13-215ENST00000477547 GAGE12BA1L429 117 aa10.91□□□□□ -0.66
SEC13-215ENST00000477547 XKRY2A2RUG3 117 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms