RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 BORCS7Q96B45 105 aa12.57□□□□□ -0.4
EPHB4-204ENST00000477446 IGKV2-40A0A087WW87 121 aaPredicted RBP12.56□□□□□ -0.4
EPHB4-204ENST00000477446 TMEM189A5PLL7 270 aa12.56□□□□□ -0.4
EPHB4-204ENST00000477446 NUPR1O60356 82 aa12.56□□□□□ -0.4
EPHB4-204ENST00000477446 IGKV2D-40P01614 121 aaPredicted RBP12.56□□□□□ -0.4
EPHB4-204ENST00000477446 DMRTA1Q5VZB9 504 aa12.56□□□□□ -0.4
EPHB4-204ENST00000477446 GATD1Q8NB37 220 aa12.56□□□□□ -0.4
EPHB4-204ENST00000477446 NRN1Q9NPD7 142 aa12.56□□□□□ -0.4
EPHB4-204ENST00000477446 PPP1R14DQ9NXH3 145 aa12.56□□□□□ -0.4
EPHB4-204ENST00000477446 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
EPHB4-204ENST00000477446 DCANP1Q8TF63 244 aa12.56□□□□□ -0.4
EPHB4-204ENST00000477446 C8orf49Q96NF6 230 aa12.56□□□□□ -0.4
EPHB4-204ENST00000477446 SAMD10Q9BYL1 202 aa12.56□□□□□ -0.4
EPHB4-204ENST00000477446 TRAV2A0A0B4J234 112 aa12.55□□□□□ -0.4
EPHB4-204ENST00000477446 CD7P09564 240 aa12.55□□□□□ -0.4
EPHB4-204ENST00000477446 LINC00310P59036 64 aa12.55□□□□□ -0.4
EPHB4-204ENST00000477446 ALKBH7Q9BT30 221 aaPredicted RBP12.55□□□□□ -0.4
EPHB4-204ENST00000477446 DNAH3Q8TD57 4116 aa12.54□□□□□ -0.4
EPHB4-204ENST00000477446 FABP5P3A8MUU1 101 aa12.54□□□□□ -0.4
EPHB4-204ENST00000477446 K7EQG2 157 aa12.54□□□□□ -0.4
EPHB4-204ENST00000477446 SH2D1AO60880 128 aa12.54□□□□□ -0.4
EPHB4-204ENST00000477446 GPX1P07203 203 aa12.54□□□□□ -0.4
EPHB4-204ENST00000477446 GTSCR1Q86UQ5 136 aa12.54□□□□□ -0.4
EPHB4-204ENST00000477446 C18orf32Q8TCD1 76 aa12.54□□□□□ -0.4
EPHB4-204ENST00000477446 KCNS1Q96KK3 526 aa12.54□□□□□ -0.4
EPHB4-204ENST00000477446 ASCL2Q99929 193 aa12.54□□□□□ -0.4
EPHB4-204ENST00000477446 VGLL1Q99990 258 aa12.54□□□□□ -0.4
EPHB4-204ENST00000477446 ZNF705FA8MVS1 300 aaPredicted RBP12.53□□□□□ -0.4
EPHB4-204ENST00000477446 Q8N1Y9 231 aa12.53□□□□□ -0.4
EPHB4-204ENST00000477446 LENEPQ9Y5L5 61 aa12.53□□□□□ -0.4
EPHB4-204ENST00000477446 TRAV8-2A0A0B4J237 113 aa12.52□□□□□ -0.4
EPHB4-204ENST00000477446 HLA-DMBP28068 263 aa12.52□□□□□ -0.4
EPHB4-204ENST00000477446 PKIAP61925 76 aa12.52□□□□□ -0.4
EPHB4-204ENST00000477446 TMEM78Q5T7P6 136 aa12.52□□□□□ -0.4
EPHB4-204ENST00000477446 SAMD13Q5VXD3 122 aa12.52□□□□□ -0.4
EPHB4-204ENST00000477446 C9orf47Q6ZRZ4 202 aa12.52□□□□□ -0.4
EPHB4-204ENST00000477446 C16orf92Q96LL3 132 aa12.52□□□□□ -0.4
EPHB4-204ENST00000477446 SOCS3O14543 225 aa12.52□□□□□ -0.41
EPHB4-204ENST00000477446 ZNF138P52744 262 aa12.52□□□□□ -0.41
EPHB4-204ENST00000477446 IGFL4Q6B9Z1 124 aa12.52□□□□□ -0.41
EPHB4-204ENST00000477446 C19orf73Q9NVV2 129 aa12.52□□□□□ -0.41
EPHB4-204ENST00000477446 LOC102724200A0A096LPH7 203 aaPredicted RBP12.51□□□□□ -0.41
EPHB4-204ENST00000477446 TSTD3H0UI37 97 aa12.51□□□□□ -0.41
EPHB4-204ENST00000477446 HIST1H1AQ02539 215 aaPredicted RBP12.51□□□□□ -0.41
EPHB4-204ENST00000477446 ODF3L2Q3SX64 289 aa12.51□□□□□ -0.41
EPHB4-204ENST00000477446 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
EPHB4-204ENST00000477446 F2Z2F3 143 aa12.5□□□□□ -0.41
EPHB4-204ENST00000477446 ZNF324O75467 553 aaPredicted RBP12.5□□□□□ -0.41
EPHB4-204ENST00000477446 SCGB1D1O95968 90 aa12.5□□□□□ -0.41
EPHB4-204ENST00000477446 ZNF688P0C7X2 276 aa12.5□□□□□ -0.41
EPHB4-204ENST00000477446 ZNF493Q6ZR52 646 aa12.5□□□□□ -0.41
EPHB4-204ENST00000477446 LINC00477Q96M19 166 aa12.5□□□□□ -0.41
EPHB4-204ENST00000477446 AGPAT4-IT1Q9H0P7 198 aa12.5□□□□□ -0.41
EPHB4-204ENST00000477446 WFDC10AQ9H1F0 79 aa12.5□□□□□ -0.41
EPHB4-204ENST00000477446 MAP6D1Q9H9H5 199 aa12.5□□□□□ -0.41
EPHB4-204ENST00000477446 PRAC2D3DTV9 90 aa12.49□□□□□ -0.41
EPHB4-204ENST00000477446 K7EIL1 84 aa12.49□□□□□ -0.41
EPHB4-204ENST00000477446 ARMS2P0C7Q2 107 aa12.49□□□□□ -0.41
EPHB4-204ENST00000477446 AMTP48728 403 aa12.49□□□□□ -0.41
EPHB4-204ENST00000477446 DEFA6Q01524 100 aa12.49□□□□□ -0.41
EPHB4-204ENST00000477446 CDPF1Q6NVV7 123 aa12.49□□□□□ -0.41
EPHB4-204ENST00000477446 RNF182Q8N6D2 247 aa12.49□□□□□ -0.41
EPHB4-204ENST00000477446 FAM110AQ9BQ89 295 aa12.49□□□□□ -0.41
EPHB4-204ENST00000477446 NAGKQ9UJ70 344 aa12.49□□□□□ -0.41
EPHB4-204ENST00000477446 OR11H12B2RN74 326 aa12.48□□□□□ -0.41
EPHB4-204ENST00000477446 RAB4AP20338 218 aa12.48□□□□□ -0.41
EPHB4-204ENST00000477446 ID1P41134 155 aa12.48□□□□□ -0.41
EPHB4-204ENST00000477446 CMC4P56277 68 aaPredicted RBP12.48□□□□□ -0.41
EPHB4-204ENST00000477446 DEFB131AP59861 70 aa12.48□□□□□ -0.41
EPHB4-204ENST00000477446 SNRPD3P62318 126 aaKnown RBP12.48□□□□□ -0.41
EPHB4-204ENST00000477446 LINC01559Q495D7 138 aa12.48□□□□□ -0.41
EPHB4-204ENST00000477446 Q8TAT8 98 aa12.48□□□□□ -0.41
EPHB4-204ENST00000477446 CHCHD1Q96BP2 118 aaKnown RBP12.48□□□□□ -0.41
EPHB4-204ENST00000477446 HSBP1O75506 76 aa12.47□□□□□ -0.41
EPHB4-204ENST00000477446 CTRLP40313 264 aa12.47□□□□□ -0.41
EPHB4-204ENST00000477446 ERCC8Q13216 396 aa12.47□□□□□ -0.41
EPHB4-204ENST00000477446 PSMG4Q5JS54 123 aa12.47□□□□□ -0.41
EPHB4-204ENST00000477446 LYZL1Q6UWQ5 148 aa12.47□□□□□ -0.41
EPHB4-204ENST00000477446 Q6ZWC4 215 aa12.47□□□□□ -0.41
EPHB4-204ENST00000477446 APRG1Q8IVJ8 170 aa12.47□□□□□ -0.41
EPHB4-204ENST00000477446 DEFB125Q8N687 156 aa12.47□□□□□ -0.41
EPHB4-204ENST00000477446 RCHY1Q96PM5 261 aa12.47□□□□□ -0.41
EPHB4-204ENST00000477446 PMCHP20382 165 aa12.47□□□□□ -0.41
EPHB4-204ENST00000477446 ZNF80P51504 273 aaPredicted RBP12.47□□□□□ -0.41
EPHB4-204ENST00000477446 ZNF124Q15973 351 aa12.47□□□□□ -0.41
EPHB4-204ENST00000477446 FER1L6-AS1Q8NA97 138 aa12.47□□□□□ -0.41
EPHB4-204ENST00000477446 TRBV7-9A0A0J9YWB2 115 aa12.46□□□□□ -0.42
EPHB4-204ENST00000477446 LINC00587B1AMM8 73 aa12.46□□□□□ -0.42
EPHB4-204ENST00000477446 ORM1P02763 201 aa12.46□□□□□ -0.42
EPHB4-204ENST00000477446 IGLC6P0CF74 106 aa12.46□□□□□ -0.42
EPHB4-204ENST00000477446 NIT1Q86X76 327 aa12.46□□□□□ -0.42
EPHB4-204ENST00000477446 C20orf173Q96LM9 149 aa12.46□□□□□ -0.42
EPHB4-204ENST00000477446 MEGF8Q7Z7M0 2845 aa12.46□□□□□ -0.42
EPHB4-204ENST00000477446 IGHV4-30-4P0DP06 118 aa12.45□□□□□ -0.42
EPHB4-204ENST00000477446 ZNF738Q8NE65 137 aa12.45□□□□□ -0.42
EPHB4-204ENST00000477446 OR10J6PQ8NGY7 276 aa12.45□□□□□ -0.42
EPHB4-204ENST00000477446 CNFNQ9BYD5 112 aa12.45□□□□□ -0.42
EPHB4-204ENST00000477446 DEFB121Q5J5C9 76 aa12.44□□□□□ -0.42
EPHB4-204ENST00000477446 TPPP3Q9BW30 176 aa12.44□□□□□ -0.42
EPHB4-204ENST00000477446 TMSB15BA0A087X1C1 80 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms