RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 TAGLN2P37802 199 aaKnown RBP11.3□□□□□ -0.6
COPS3-207ENST00000477299 ZNF674Q2M3X9 581 aa11.3□□□□□ -0.6
COPS3-207ENST00000477299 FAM159AQ6UWV7 190 aa11.3□□□□□ -0.6
COPS3-207ENST00000477299 MUC7Q8TAX7 377 aa11.3□□□□□ -0.6
COPS3-207ENST00000477299 STARD9Q9P2P6 4700 aa11.29□□□□□ -0.6
COPS3-207ENST00000477299 TMEM189A5PLL7 270 aa11.29□□□□□ -0.6
COPS3-207ENST00000477299 FABP5P3A8MUU1 101 aa11.29□□□□□ -0.6
COPS3-207ENST00000477299 M0R036 132 aa11.29□□□□□ -0.6
COPS3-207ENST00000477299 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
COPS3-207ENST00000477299 PRR27Q6MZM9 219 aa11.29□□□□□ -0.6
COPS3-207ENST00000477299 ZNF493Q6ZR52 646 aa11.29□□□□□ -0.6
COPS3-207ENST00000477299 Q6ZTC4 211 aa11.29□□□□□ -0.6
COPS3-207ENST00000477299 PARLQ9H300 379 aa11.29□□□□□ -0.6
COPS3-207ENST00000477299 NACAE9PAV3 2078 aa11.28□□□□□ -0.6
COPS3-207ENST00000477299 TMSB15BA0A087X1C1 80 aa11.28□□□□□ -0.6
COPS3-207ENST00000477299 IGHV3-16A0A0C4DH30 117 aa11.28□□□□□ -0.6
COPS3-207ENST00000477299 TMEM250H0YL14 139 aa11.28□□□□□ -0.6
COPS3-207ENST00000477299 DEFB130BP0DP73 79 aa11.28□□□□□ -0.6
COPS3-207ENST00000477299 DEFB130AP0DP74 79 aa11.28□□□□□ -0.6
COPS3-207ENST00000477299 RPL19P84098 196 aaKnown RBP11.28□□□□□ -0.6
COPS3-207ENST00000477299 OR5I1Q13606 314 aa11.28□□□□□ -0.6
COPS3-207ENST00000477299 TDRG1Q3Y452 100 aa11.28□□□□□ -0.6
COPS3-207ENST00000477299 CLLU1Q5K131 121 aa11.28□□□□□ -0.6
COPS3-207ENST00000477299 OCC1Q8TAD7 63 aa11.28□□□□□ -0.6
COPS3-207ENST00000477299 GRIFINA4D1Z8 144 aa11.27□□□□□ -0.61
COPS3-207ENST00000477299 ORM1P02763 201 aa11.27□□□□□ -0.61
COPS3-207ENST00000477299 MGST1P10620 155 aaKnown RBP11.27□□□□□ -0.61
COPS3-207ENST00000477299 GNG4P50150 75 aa11.27□□□□□ -0.61
COPS3-207ENST00000477299 RAB14P61106 215 aa11.27□□□□□ -0.61
COPS3-207ENST00000477299 FAM162BQ5T6X4 162 aa11.27□□□□□ -0.61
COPS3-207ENST00000477299 Q6ZTI0 123 aa11.27□□□□□ -0.61
COPS3-207ENST00000477299 TIMM8BQ9Y5J9 83 aaPredicted RBP11.27□□□□□ -0.61
COPS3-207ENST00000477299 SNURFLB1AK76 121 aa11.26□□□□□ -0.61
COPS3-207ENST00000477299 KRBOX1C9JBD0 128 aa11.26□□□□□ -0.61
COPS3-207ENST00000477299 K7EN84 100 aa11.26□□□□□ -0.61
COPS3-207ENST00000477299 TCL1AP56279 114 aa11.26□□□□□ -0.61
COPS3-207ENST00000477299 SDF2L1Q9HCN8 221 aa11.26□□□□□ -0.61
COPS3-207ENST00000477299 MRPL16Q9NX20 251 aaKnown RBP11.26□□□□□ -0.61
COPS3-207ENST00000477299 DYNC2H1Q8NCM8 4307 aaKnown RBP11.26□□□□□ -0.61
COPS3-207ENST00000477299 GAGE12BA1L429 117 aa11.25□□□□□ -0.61
COPS3-207ENST00000477299 LYRM9A8MSI8 78 aa11.25□□□□□ -0.61
COPS3-207ENST00000477299 GAGE7O76087 117 aa11.25□□□□□ -0.61
COPS3-207ENST00000477299 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
COPS3-207ENST00000477299 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
COPS3-207ENST00000477299 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
COPS3-207ENST00000477299 DAD1P61803 113 aa11.25□□□□□ -0.61
COPS3-207ENST00000477299 DAZ2Q13117 558 aaKnown RBP11.25□□□□□ -0.61
COPS3-207ENST00000477299 PHLDA1Q8WV24 401 aaPredicted RBP11.25□□□□□ -0.61
COPS3-207ENST00000477299 TRGV11A0A075B6L2 103 aa11.24□□□□□ -0.61
COPS3-207ENST00000477299 B4DEV8 164 aa11.24□□□□□ -0.61
COPS3-207ENST00000477299 SPINK4O60575 86 aa11.24□□□□□ -0.61
COPS3-207ENST00000477299 RNASE3P12724 160 aaKnown RBP11.24□□□□□ -0.61
COPS3-207ENST00000477299 ZNF415Q09FC8 603 aa11.24□□□□□ -0.61
COPS3-207ENST00000477299 IBA57Q5T440 356 aaKnown RBP11.24□□□□□ -0.61
COPS3-207ENST00000477299 CASC10Q5T4H9 136 aa11.24□□□□□ -0.61
COPS3-207ENST00000477299 LINC00612Q8N6U2 182 aa11.24□□□□□ -0.61
COPS3-207ENST00000477299 KCNS1Q96KK3 526 aa11.24□□□□□ -0.61
COPS3-207ENST00000477299 TRGV1A0A0A0MS02 117 aa11.23□□□□□ -0.61
COPS3-207ENST00000477299 C19orf71A6NCJ1 209 aa11.23□□□□□ -0.61
COPS3-207ENST00000477299 C9JCJ5 164 aa11.23□□□□□ -0.61
COPS3-207ENST00000477299 HTN3P15516 51 aa11.23□□□□□ -0.61
COPS3-207ENST00000477299 PEA15Q15121 130 aa11.23□□□□□ -0.61
COPS3-207ENST00000477299 LINC01559Q495D7 138 aa11.23□□□□□ -0.61
COPS3-207ENST00000477299 SMIM7Q9BQ49 75 aa11.23□□□□□ -0.61
COPS3-207ENST00000477299 ZNF727A8MUV8 499 aa11.22□□□□□ -0.61
COPS3-207ENST00000477299 GZMBP10144 247 aa11.22□□□□□ -0.61
COPS3-207ENST00000477299 C9orf85Q96MD7 179 aa11.22□□□□□ -0.61
COPS3-207ENST00000477299 TENM2Q9NT68 2774 aa11.21□□□□□ -0.61
COPS3-207ENST00000477299 NDUFS6O75380 124 aaKnown RBP11.21□□□□□ -0.61
COPS3-207ENST00000477299 CEMP1Q6PRD7 247 aaPredicted RBP11.21□□□□□ -0.61
COPS3-207ENST00000477299 NUDT10Q8NFP7 164 aa11.21□□□□□ -0.61
COPS3-207ENST00000477299 NUDT11Q96G61 164 aa11.21□□□□□ -0.61
COPS3-207ENST00000477299 RNASE7Q9H1E1 156 aaKnown RBP11.21□□□□□ -0.61
COPS3-207ENST00000477299 KMT2CQ8NEZ4 4911 aaKnown RBP11.21□□□□□ -0.61
COPS3-207ENST00000477299 PLECQ15149 4684 aaKnown RBP11.21□□□□□ -0.62
COPS3-207ENST00000477299 DEFB131BA0A096LNP1 70 aa11.2□□□□□ -0.62
COPS3-207ENST00000477299 C3orf84H3BNL1 204 aa11.2□□□□□ -0.62
COPS3-207ENST00000477299 H3BVH4 76 aa11.2□□□□□ -0.62
COPS3-207ENST00000477299 POM121L12Q8N7R1 296 aa11.2□□□□□ -0.62
COPS3-207ENST00000477299 TRAV10A0A0B4J240 114 aa11.19□□□□□ -0.62
COPS3-207ENST00000477299 MUC21A0A0G2JKD1 596 aa11.19□□□□□ -0.62
COPS3-207ENST00000477299 MUC21A0A140T8X8 626 aa11.19□□□□□ -0.62
COPS3-207ENST00000477299 IGHV3-53P01767 116 aa11.19□□□□□ -0.62
COPS3-207ENST00000477299 ARMS2P0C7Q2 107 aa11.19□□□□□ -0.62
COPS3-207ENST00000477299 HOXA5P20719 270 aa11.19□□□□□ -0.62
COPS3-207ENST00000477299 LINC01551Q86U37 167 aa11.19□□□□□ -0.62
COPS3-207ENST00000477299 SMIM12Q96EX1 92 aa11.19□□□□□ -0.62
COPS3-207ENST00000477299 SPXQ9BT56 116 aa11.19□□□□□ -0.62
COPS3-207ENST00000477299 TEX48A0A1B0GUV7 120 aa11.18□□□□□ -0.62
COPS3-207ENST00000477299 M0R2P5 195 aa11.18□□□□□ -0.62
COPS3-207ENST00000477299 SFTA3P0C7M3 94 aa11.18□□□□□ -0.62
COPS3-207ENST00000477299 S100A4P26447 101 aaKnown RBP11.18□□□□□ -0.62
COPS3-207ENST00000477299 ASIPP42127 132 aa11.18□□□□□ -0.62
COPS3-207ENST00000477299 DNLZQ5SXM8 178 aa11.18□□□□□ -0.62
COPS3-207ENST00000477299 OR2D3Q8NGH3 330 aa11.18□□□□□ -0.62
COPS3-207ENST00000477299 RASL10AQ92737 203 aa11.18□□□□□ -0.62
COPS3-207ENST00000477299 SMDT1Q9H4I9 107 aa11.18□□□□□ -0.62
COPS3-207ENST00000477299 JPT2Q9H910 190 aa11.18□□□□□ -0.62
COPS3-207ENST00000477299 TRGV2A0A075B6R0 118 aa11.17□□□□□ -0.62
COPS3-207ENST00000477299 F5H768 121 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms