RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TMEM78Q5T7P6 136 aa11.79□□□□□ -0.52
CLSTN1-205ENST00000477264 LYPD2Q6UXB3 125 aa11.79□□□□□ -0.52
CLSTN1-205ENST00000477264 NFE4Q86UQ8 179 aa11.79□□□□□ -0.52
CLSTN1-205ENST00000477264 ANKHD1Q8IWZ3 2542 aaKnown RBP11.78□□□□□ -0.52
CLSTN1-205ENST00000477264 M0QXV9 152 aa11.78□□□□□ -0.52
CLSTN1-205ENST00000477264 ANAPC13Q9BS18 74 aa11.78□□□□□ -0.52
CLSTN1-205ENST00000477264 DYNLRB1Q9NP97 96 aa11.78□□□□□ -0.52
CLSTN1-205ENST00000477264 GATA1P15976 413 aaPredicted RBP11.78□□□□□ -0.52
CLSTN1-205ENST00000477264 IGHV4-4A0A075B6R2 117 aa11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 B9A039 149 aa11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 ZNF688P0C7X2 276 aa11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 PPIFP30405 207 aaKnown RBP11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 PSMB2P49721 201 aa11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 ZFAND6Q6FIF0 208 aa11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 RNF183Q96D59 192 aa11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 LINC01549A6NIU2 74 aa11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 A8MWV9 139 aa11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 GAGE5Q13069 117 aa11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 GAGE6Q13070 117 aa11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 FHL3Q13643 280 aa11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 SMIM2Q9BVW6 85 aa11.77□□□□□ -0.53
CLSTN1-205ENST00000477264 PRB1P04280 392 aa11.76□□□□□ -0.53
CLSTN1-205ENST00000477264 ROS1P08922 2347 aa11.76□□□□□ -0.53
CLSTN1-205ENST00000477264 TOMM6Q96B49 74 aa11.76□□□□□ -0.53
CLSTN1-205ENST00000477264 SLC50A1Q9BRV3 221 aa11.76□□□□□ -0.53
CLSTN1-205ENST00000477264 CFAP46Q8IYW2 2715 aa11.76□□□□□ -0.53
CLSTN1-205ENST00000477264 BBC3Q96PG8 261 aaPredicted RBP11.75□□□□□ -0.53
CLSTN1-205ENST00000477264 RALYQ9UKM9 306 aaKnown RBP11.75□□□□□ -0.53
CLSTN1-205ENST00000477264 IGLV11-55A0A075B6I3 123 aa11.75□□□□□ -0.53
CLSTN1-205ENST00000477264 LOC107984156A0A0G2JMH3 177 aa11.75□□□□□ -0.53
CLSTN1-205ENST00000477264 PRB4P10163 310 aaPredicted RBP11.75□□□□□ -0.53
CLSTN1-205ENST00000477264 ARL17AQ8IVW1 177 aa11.75□□□□□ -0.53
CLSTN1-205ENST00000477264 NEXN-AS1Q8NBZ9 246 aa11.75□□□□□ -0.53
CLSTN1-205ENST00000477264 CARD19Q96LW7 228 aa11.75□□□□□ -0.53
CLSTN1-205ENST00000477264 ZNF815PA8K554 130 aa11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 IGHG4P01861 327 aa11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 TEX29Q8N6K0 151 aa11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 GLMPQ8WWB7 406 aa11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 SCGB3A1Q96QR1 104 aa11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 PRADC1Q9BSG0 188 aa11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 SPTBN1Q01082 2364 aaKnown RBP11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 NBR2O15453 112 aa11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 ASIPP42127 132 aa11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 EFNA4P52798 201 aa11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 CFHR4Q92496 578 aa11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 CCL17Q92583 94 aa11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 SPANXA1Q9NS26 97 aa11.74□□□□□ -0.53
CLSTN1-205ENST00000477264 TRGV3P03979 118 aa11.73□□□□□ -0.53
CLSTN1-205ENST00000477264 ERCC8Q13216 396 aa11.73□□□□□ -0.53
CLSTN1-205ENST00000477264 SCGB1D4Q6XE38 83 aa11.73□□□□□ -0.53
CLSTN1-205ENST00000477264 C21orf62Q9NYP8 219 aa11.73□□□□□ -0.53
CLSTN1-205ENST00000477264 CD7P09564 240 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 SRSF9Q13242 221 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 PAPPA-AS1Q5QFB9 102 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 DYNAPQ8N1N2 210 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 ZNF843Q8N446 348 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 CITED1Q99966 193 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 PKDREJQ9NTG1 2253 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 LY6LH3BQJ8 138 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 COX6B1P14854 86 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 SRD5A1P18405 259 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 HERVK_113P61574 105 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 NPBQ8NG41 125 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 UFC1Q9Y3C8 167 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 SMAD5-AS1Q9Y6J3 95 aa11.72□□□□□ -0.53
CLSTN1-205ENST00000477264 IGKV3D-20A0A0C4DH25 116 aa11.71□□□□□ -0.53
CLSTN1-205ENST00000477264 IGHV7-4-1A0A0J9YVY3 117 aa11.71□□□□□ -0.53
CLSTN1-205ENST00000477264 PRSS29PA6NIE9 313 aa11.71□□□□□ -0.53
CLSTN1-205ENST00000477264 F8W735 103 aaPredicted RBP11.71□□□□□ -0.53
CLSTN1-205ENST00000477264 MRPL53Q96EL3 112 aaKnown RBP11.71□□□□□ -0.53
CLSTN1-205ENST00000477264 FANCD2OSQ96PS1 177 aa11.71□□□□□ -0.53
CLSTN1-205ENST00000477264 HIF1ANQ9NWT6 349 aa11.71□□□□□ -0.53
CLSTN1-205ENST00000477264 NDUFA11Q86Y39 141 aa11.71□□□□□ -0.54
CLSTN1-205ENST00000477264 EPG5Q9HCE0 2579 aa11.71□□□□□ -0.54
CLSTN1-205ENST00000477264 TCL1BO95988 128 aa11.69□□□□□ -0.54
CLSTN1-205ENST00000477264 SPANXN1Q5VSR9 72 aa11.69□□□□□ -0.54
CLSTN1-205ENST00000477264 CFAP161Q6P656 301 aa11.69□□□□□ -0.54
CLSTN1-205ENST00000477264 Q6Q795 121 aa11.69□□□□□ -0.54
CLSTN1-205ENST00000477264 ZFYVE26Q68DK2 2539 aa11.69□□□□□ -0.54
CLSTN1-205ENST00000477264 C19orf84I3L1E1 186 aa11.69□□□□□ -0.54
CLSTN1-205ENST00000477264 M0R381 172 aa11.69□□□□□ -0.54
CLSTN1-205ENST00000477264 ANKRD29Q8N6D5 301 aa11.69□□□□□ -0.54
CLSTN1-205ENST00000477264 BAALCQ8WXS3 180 aa11.69□□□□□ -0.54
CLSTN1-205ENST00000477264 SS18L2Q9UHA2 77 aa11.69□□□□□ -0.54
CLSTN1-205ENST00000477264 RHODO00212 210 aa11.68□□□□□ -0.54
CLSTN1-205ENST00000477264 HLA-DMBP28068 263 aa11.68□□□□□ -0.54
CLSTN1-205ENST00000477264 SUMO2P61956 95 aaKnown RBP11.68□□□□□ -0.54
CLSTN1-205ENST00000477264 ZFP2Q6ZN57 461 aa11.68□□□□□ -0.54
CLSTN1-205ENST00000477264 C10orf126Q8N4M7 172 aa11.68□□□□□ -0.54
CLSTN1-205ENST00000477264 ABCA4P78363 2273 aa11.68□□□□□ -0.54
CLSTN1-205ENST00000477264 TRAV26-2A0A0B4J265 109 aa11.68□□□□□ -0.54
CLSTN1-205ENST00000477264 TIMM23O14925 209 aa11.68□□□□□ -0.54
CLSTN1-205ENST00000477264 PTH2Q96A98 100 aa11.68□□□□□ -0.54
CLSTN1-205ENST00000477264 ABCA1O95477 2261 aa11.67□□□□□ -0.54
CLSTN1-205ENST00000477264 CENPVL3A0A0U1RRI6 287 aa11.67□□□□□ -0.54
CLSTN1-205ENST00000477264 PPP1R17O96001 155 aa11.67□□□□□ -0.54
CLSTN1-205ENST00000477264 COX7A1P24310 79 aa11.67□□□□□ -0.54
CLSTN1-205ENST00000477264 IGHV1-69DA0A0B4J2H0 117 aa11.67□□□□□ -0.54
CLSTN1-205ENST00000477264 SCGB1C2P0DMR2 95 aa11.67□□□□□ -0.54
CLSTN1-205ENST00000477264 GATA3P23771 443 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms