RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SNAI2O43623 268 aa12.52□□□□□ -0.41
TMEM53-208ENST00000476724 TRBV12-3P01733 135 aa12.52□□□□□ -0.41
TMEM53-208ENST00000476724 PF4V1P10720 104 aa12.52□□□□□ -0.41
TMEM53-208ENST00000476724 ZNF124Q15973 351 aa12.52□□□□□ -0.41
TMEM53-208ENST00000476724 DEFB112Q30KQ8 113 aa12.52□□□□□ -0.41
TMEM53-208ENST00000476724 OR1N2Q8NGR9 330 aa12.52□□□□□ -0.41
TMEM53-208ENST00000476724 OR10J6PQ8NGY7 276 aa12.52□□□□□ -0.41
TMEM53-208ENST00000476724 ORAOV1Q8WV07 137 aa12.52□□□□□ -0.41
TMEM53-208ENST00000476724 IFI27L1Q96BM0 104 aa12.52□□□□□ -0.41
TMEM53-208ENST00000476724 GCN1Q92616 2671 aaKnown RBP12.51□□□□□ -0.41
TMEM53-208ENST00000476724 IGLV1-40P01703 118 aa12.51□□□□□ -0.41
TMEM53-208ENST00000476724 COX8AP10176 69 aa12.51□□□□□ -0.41
TMEM53-208ENST00000476724 C12orf54Q6X4T0 127 aa12.51□□□□□ -0.41
TMEM53-208ENST00000476724 OR4X2Q8NGF9 303 aa12.51□□□□□ -0.41
TMEM53-208ENST00000476724 PDZD2O15018 2839 aa12.51□□□□□ -0.41
TMEM53-208ENST00000476724 SOCS3O14543 225 aa12.5□□□□□ -0.41
TMEM53-208ENST00000476724 GPHB5Q86YW7 130 aa12.5□□□□□ -0.41
TMEM53-208ENST00000476724 C20orf173Q96LM9 149 aa12.5□□□□□ -0.41
TMEM53-208ENST00000476724 PRSS47A8MTI9 375 aa12.5□□□□□ -0.41
TMEM53-208ENST00000476724 FCER1GP30273 86 aa12.5□□□□□ -0.41
TMEM53-208ENST00000476724 BLCAPP62952 87 aa12.5□□□□□ -0.41
TMEM53-208ENST00000476724 DEFB125Q8N687 156 aa12.5□□□□□ -0.41
TMEM53-208ENST00000476724 TRBV7-9A0A0J9YWB2 115 aa12.49□□□□□ -0.41
TMEM53-208ENST00000476724 FSHBP01225 129 aa12.49□□□□□ -0.41
TMEM53-208ENST00000476724 PSMG4Q5JS54 123 aa12.49□□□□□ -0.41
TMEM53-208ENST00000476724 KLK15Q9H2R5 256 aa12.49□□□□□ -0.41
TMEM53-208ENST00000476724 ITPR3Q14573 2671 aa12.49□□□□□ -0.41
TMEM53-208ENST00000476724 CREBBPQ92793 2442 aa12.49□□□□□ -0.41
TMEM53-208ENST00000476724 IGHV3-11P01762 117 aa12.49□□□□□ -0.41
TMEM53-208ENST00000476724 FOXE3Q13461 319 aa12.49□□□□□ -0.41
TMEM53-208ENST00000476724 Q6ZS46 218 aa12.49□□□□□ -0.41
TMEM53-208ENST00000476724 Q8N8P6 123 aa12.49□□□□□ -0.41
TMEM53-208ENST00000476724 TEX15Q9BXT5 2789 aa12.48□□□□□ -0.41
TMEM53-208ENST00000476724 TRAV21A0A0B4J279 112 aa12.48□□□□□ -0.41
TMEM53-208ENST00000476724 NPSP0C0P6 89 aa12.48□□□□□ -0.41
TMEM53-208ENST00000476724 EVI2AP22794 236 aa12.48□□□□□ -0.41
TMEM53-208ENST00000476724 MPV17L2Q567V2 206 aa12.48□□□□□ -0.41
TMEM53-208ENST00000476724 SPANXN1Q5VSR9 72 aa12.48□□□□□ -0.41
TMEM53-208ENST00000476724 COX11Q9Y6N1 276 aa12.48□□□□□ -0.41
TMEM53-208ENST00000476724 K7EMT4 169 aa12.47□□□□□ -0.41
TMEM53-208ENST00000476724 NUDT3O95989 172 aa12.47□□□□□ -0.41
TMEM53-208ENST00000476724 IGHV4-59P01825 116 aa12.47□□□□□ -0.41
TMEM53-208ENST00000476724 CFHR3Q02985 330 aa12.47□□□□□ -0.41
TMEM53-208ENST00000476724 OR2K2Q8NGT1 345 aa12.47□□□□□ -0.41
TMEM53-208ENST00000476724 AKAP9Q99996 3911 aa12.47□□□□□ -0.41
TMEM53-208ENST00000476724 CCDC168Q8NDH2 2452 aa12.47□□□□□ -0.41
TMEM53-208ENST00000476724 LEPP41159 167 aa12.47□□□□□ -0.41
TMEM53-208ENST00000476724 FXYD7P58549 80 aa12.47□□□□□ -0.41
TMEM53-208ENST00000476724 ZFAND2AQ8N6M9 145 aa12.47□□□□□ -0.41
TMEM53-208ENST00000476724 DAZ1Q9NQZ3 744 aaKnown RBP12.47□□□□□ -0.41
TMEM53-208ENST00000476724 BVES-AS1Q5T3Y7 98 aa12.46□□□□□ -0.41
TMEM53-208ENST00000476724 SAMD13Q5VXD3 122 aa12.46□□□□□ -0.41
TMEM53-208ENST00000476724 RHPN1-AS1Q9BWJ2 59 aa12.46□□□□□ -0.41
TMEM53-208ENST00000476724 GAS8-AS1O95177 125 aa12.46□□□□□ -0.42
TMEM53-208ENST00000476724 RPL11P62913 178 aaKnown RBP12.46□□□□□ -0.42
TMEM53-208ENST00000476724 MRAP2Q96G30 205 aa12.46□□□□□ -0.42
TMEM53-208ENST00000476724 FAM19A4Q96LR4 140 aa12.46□□□□□ -0.42
TMEM53-208ENST00000476724 ITPR2Q14571 2701 aa12.45□□□□□ -0.42
TMEM53-208ENST00000476724 IGLV2-18A0A075B6J9 118 aa12.45□□□□□ -0.42
TMEM53-208ENST00000476724 MED14OSP0DP75 135 aa12.45□□□□□ -0.42
TMEM53-208ENST00000476724 PRR9Q5T870 116 aa12.45□□□□□ -0.42
TMEM53-208ENST00000476724 APRG1Q8IVJ8 170 aa12.45□□□□□ -0.42
TMEM53-208ENST00000476724 PEF1Q9UBV8 284 aaKnown RBP12.45□□□□□ -0.42
TMEM53-208ENST00000476724 TP73-AS1Q9UF72 201 aa12.44□□□□□ -0.42
TMEM53-208ENST00000476724 SMPXQ9UHP9 88 aa12.44□□□□□ -0.42
TMEM53-208ENST00000476724 TMEM89A2RUT3 159 aa12.44□□□□□ -0.42
TMEM53-208ENST00000476724 H3BVH4 76 aa12.44□□□□□ -0.42
TMEM53-208ENST00000476724 ANKRD39Q53RE8 183 aa12.44□□□□□ -0.42
TMEM53-208ENST00000476724 NRACQ8N912 160 aa12.44□□□□□ -0.42
TMEM53-208ENST00000476724 UFC1Q9Y3C8 167 aa12.44□□□□□ -0.42
TMEM53-208ENST00000476724 UNC79Q9P2D8 2635 aa12.44□□□□□ -0.42
TMEM53-208ENST00000476724 GATA1P15976 413 aaPredicted RBP12.43□□□□□ -0.42
TMEM53-208ENST00000476724 SIVA1O15304 175 aa12.42□□□□□ -0.42
TMEM53-208ENST00000476724 ID1P41134 155 aa12.42□□□□□ -0.42
TMEM53-208ENST00000476724 ASIPP42127 132 aa12.42□□□□□ -0.42
TMEM53-208ENST00000476724 TM4SF20Q53R12 229 aa12.42□□□□□ -0.42
TMEM53-208ENST00000476724 Q6ZQT7 251 aa12.42□□□□□ -0.42
TMEM53-208ENST00000476724 BOD1L2Q8IYS8 172 aa12.42□□□□□ -0.42
TMEM53-208ENST00000476724 ATP5LO75964 103 aa12.42□□□□□ -0.42
TMEM53-208ENST00000476724 FGF6P10767 208 aa12.42□□□□□ -0.42
TMEM53-208ENST00000476724 LAGE3Q14657 143 aa12.42□□□□□ -0.42
TMEM53-208ENST00000476724 C2orf91Q6ZV80 131 aa12.42□□□□□ -0.42
TMEM53-208ENST00000476724 TMEM158Q8WZ71 300 aa12.42□□□□□ -0.42
TMEM53-208ENST00000476724 S100A4P26447 101 aaKnown RBP12.41□□□□□ -0.42
TMEM53-208ENST00000476724 PSMB8P28062 276 aa12.41□□□□□ -0.42
TMEM53-208ENST00000476724 TMEM95Q3KNT9 176 aa12.41□□□□□ -0.42
TMEM53-208ENST00000476724 OR9G4Q8NGQ1 327 aa12.41□□□□□ -0.42
TMEM53-208ENST00000476724 ZMAT4Q9H898 229 aa12.41□□□□□ -0.42
TMEM53-208ENST00000476724 FLNAP21333 2647 aaKnown RBP12.41□□□□□ -0.42
TMEM53-208ENST00000476724 MXRA5Q9NR99 2828 aa12.41□□□□□ -0.42
TMEM53-208ENST00000476724 CD5LO43866 347 aa12.41□□□□□ -0.42
TMEM53-208ENST00000476724 UBE2V1Q13404 147 aa12.41□□□□□ -0.42
TMEM53-208ENST00000476724 Q6YL49 198 aa12.41□□□□□ -0.42
TMEM53-208ENST00000476724 C18orf15Q96N68 181 aa12.41□□□□□ -0.42
TMEM53-208ENST00000476724 PRSS1P07477 247 aa12.4□□□□□ -0.42
TMEM53-208ENST00000476724 PTTG1IPP53801 180 aa12.4□□□□□ -0.42
TMEM53-208ENST00000476724 LCNL1Q6ZST4 164 aa12.4□□□□□ -0.42
TMEM53-208ENST00000476724 DPH3P1Q9H4G8 78 aa12.4□□□□□ -0.42
TMEM53-208ENST00000476724 DKK2Q9UBU2 259 aa12.4□□□□□ -0.42
TMEM53-208ENST00000476724 TLN2Q9Y4G6 2542 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms