RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 PLA2G1BP04054 148 aaKnown RBP3.17□□□□□ -1.9
CD55-208ENST00000476590 IGHV3-30-5P0DP03 117 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 GP1BBP13224 206 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 MRPL51Q4U2R6 128 aaKnown RBP3.17□□□□□ -1.9
CD55-208ENST00000476590 SPINK9Q5DT21 86 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 VKORC1L1Q8N0U8 176 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 TMEM263Q8WUH6 116 aaKnown RBP3.17□□□□□ -1.9
CD55-208ENST00000476590 SRSF12Q8WXF0 261 aaKnown RBP3.17□□□□□ -1.9
CD55-208ENST00000476590 ZNF799Q96GE5 643 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 ZNF714Q96N38 554 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 SLC50A1Q9BRV3 221 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 PAXXQ9BUH6 204 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 SRXN1Q9BYN0 137 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 MYO7BQ6PIF6 2116 aa3.16□□□□□ -1.9
CD55-208ENST00000476590 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.16□□□□□ -1.9
CD55-208ENST00000476590 IGHG2P01859 326 aa3.16□□□□□ -1.9
CD55-208ENST00000476590 RNASE2P10153 161 aaKnown RBP3.16□□□□□ -1.9
CD55-208ENST00000476590 GATA1P15976 413 aaPredicted RBP3.16□□□□□ -1.9
CD55-208ENST00000476590 CKS2P33552 79 aa3.16□□□□□ -1.9
CD55-208ENST00000476590 SAA4P35542 130 aa3.16□□□□□ -1.9
CD55-208ENST00000476590 SNRPD3P62318 126 aaKnown RBP3.16□□□□□ -1.9
CD55-208ENST00000476590 MLANAQ16655 118 aa3.16□□□□□ -1.9
CD55-208ENST00000476590 Q1RN00 199 aa3.16□□□□□ -1.9
CD55-208ENST00000476590 GUSBP11Q6P575 273 aa3.16□□□□□ -1.9
CD55-208ENST00000476590 LINC00596Q86U02 117 aa3.16□□□□□ -1.9
CD55-208ENST00000476590 NUP37Q8NFH4 326 aa3.16□□□□□ -1.9
CD55-208ENST00000476590 A0A0J9YY99 117 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 TIMM17BO60830 172 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 COX6CP09669 75 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 COX6B1P14854 86 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 ATP5EP56381 51 aaPredicted RBP3.15□□□□□ -1.9
CD55-208ENST00000476590 CFHR3Q02985 330 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 DAZAP2Q15038 168 aaPredicted RBP3.15□□□□□ -1.9
CD55-208ENST00000476590 RHOHQ15669 191 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 DEFB134Q4QY38 66 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 GFRALQ6UXV0 394 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 VN1R4Q7Z5H5 301 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 DAND5Q8N907 189 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 C11orf45Q8TAV5 145 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 WFDC5Q8TCV5 224 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 ZNF524Q96C55 264 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 FAM167A-AS1Q96KT0 104 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 HES7Q9BYE0 225 aa3.15□□□□□ -1.9
CD55-208ENST00000476590 TRGV8A0A0C4DH27 118 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 A0A1W2PQD3 144 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 LINC00473A8K010 186 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 F8W735 103 aaPredicted RBP3.15□□□□□ -1.91
CD55-208ENST00000476590 M0R1B8 84 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 SPRY3O43610 288 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 TRIAP1O43715 76 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 LINC00271P0C7V0 271 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 UBE2E1P51965 193 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 SS18Q15532 418 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 Q6JHZ5 121 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 FAM223AQ8IWN6 122 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 SLC25A29Q8N8R3 303 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 RNASE6Q93091 150 aaKnown RBP3.15□□□□□ -1.91
CD55-208ENST00000476590 EEF1AKMT3Q96AZ1 226 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 UBE2E2Q96LR5 201 aa3.15□□□□□ -1.91
CD55-208ENST00000476590 TRBV19A0A075B6N1 114 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 TRBV6-1A0A0K0K1D8 114 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 RBMY1BA6NDE4 496 aaKnown RBP3.14□□□□□ -1.91
CD55-208ENST00000476590 RBMY1EA6NEQ0 496 aaKnown RBP3.14□□□□□ -1.91
CD55-208ENST00000476590 IGHV3-13P01766 116 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 RBMY1DP0C7P1 496 aaKnown RBP3.14□□□□□ -1.91
CD55-208ENST00000476590 RBMY1A1P0DJD3 496 aaKnown RBP3.14□□□□□ -1.91
CD55-208ENST00000476590 RBMY1CP0DJD4 496 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 CD59P13987 128 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 RBMY1FQ15415 496 aaKnown RBP3.14□□□□□ -1.91
CD55-208ENST00000476590 NNATQ16517 81 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 DCANP1Q8TF63 244 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 SPTSSAQ969W0 71 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 TIMM21Q9BVV7 248 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 RBM12B-AS1Q9P1G2 102 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 MOB4Q9Y3A3 225 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 CEP192Q8TEP8 1941 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 ALPK2Q86TB3 2170 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 IGHV1-58A0A0C4DH39 117 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 TMEM223A0PJW6 202 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 FAM223BA6NKX1 122 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 C17orf98A8MV24 154 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 H7BZZ5 65 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 H7C2G1 150 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 LST1O00453 97 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 CCKP06307 115 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 HOXD3P31249 432 aaPredicted RBP3.14□□□□□ -1.91
CD55-208ENST00000476590 XCL1P47992 114 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 APOC4P55056 127 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 SUMO2P61956 95 aaKnown RBP3.14□□□□□ -1.91
CD55-208ENST00000476590 EIF4EBP1Q13541 118 aaPredicted RBP3.14□□□□□ -1.91
CD55-208ENST00000476590 CIRBPQ14011 172 aaKnown RBP3.14□□□□□ -1.91
CD55-208ENST00000476590 Q86TA4 180 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 XCL2Q9UBD3 114 aa3.14□□□□□ -1.91
CD55-208ENST00000476590 SPAG17Q6Q759 2223 aa3.13□□□□□ -1.91
CD55-208ENST00000476590 LTBP2Q14767 1821 aa3.13□□□□□ -1.91
CD55-208ENST00000476590 IGHV1OR15-9A0A0B4J2B8 117 aa3.13□□□□□ -1.91
CD55-208ENST00000476590 NGFP01138 241 aa3.13□□□□□ -1.91
CD55-208ENST00000476590 FSHBP01225 129 aa3.13□□□□□ -1.91
CD55-208ENST00000476590 LGALS3P17931 250 aaKnown RBP3.13□□□□□ -1.91
CD55-208ENST00000476590 COX8CQ7Z4L0 72 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms