RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 OCC1Q8TAD7 63 aa3.83□□□□□ -1.8
SSR3-206ENST00000476217 DLX4Q92988 240 aaPredicted RBP3.83□□□□□ -1.8
SSR3-206ENST00000476217 C11orf52Q96A22 123 aa3.83□□□□□ -1.8
SSR3-206ENST00000476217 SLC50A1Q9BRV3 221 aa3.83□□□□□ -1.8
SSR3-206ENST00000476217 ATG101Q9BSB4 218 aa3.83□□□□□ -1.8
SSR3-206ENST00000476217 ALKBH7Q9BT30 221 aaPredicted RBP3.83□□□□□ -1.8
SSR3-206ENST00000476217 DERL1Q9BUN8 251 aa3.83□□□□□ -1.8
SSR3-206ENST00000476217 EPDR1Q9UM22 224 aa3.83□□□□□ -1.8
SSR3-206ENST00000476217 CARHSP1Q9Y2V2 147 aaKnown RBP3.83□□□□□ -1.8
SSR3-206ENST00000476217 C5orf52A6NGY3 159 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 DNASE2O00115 360 aaPredicted RBP3.82□□□□□ -1.8
SSR3-206ENST00000476217 OVOL1O14753 267 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 ZNF253O75346 499 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 NDUFS6O75380 124 aaKnown RBP3.82□□□□□ -1.8
SSR3-206ENST00000476217 SNAPINO95295 136 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 TCRAP04437 139 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 MYCNOSP40205 109 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 RPL35P42766 123 aaKnown RBP3.82□□□□□ -1.8
SSR3-206ENST00000476217 TFPI2P48307 235 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 GNG4P50150 75 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 KRTAP10-3P60369 221 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 ADIRFQ15847 76 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 GUCA2BQ16661 112 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 TMEM241Q24JQ0 296 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 CENPWQ5EE01 88 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 SAMD13Q5VXD3 122 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 GOLT1AQ6ZVE7 132 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 RNF182Q8N6D2 247 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 ZNF738Q8NE65 137 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 HIST1H2BAQ96A08 127 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 TVP23CQ96ET8 276 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 NRN1Q9NPD7 142 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 ZNF331Q9NQX6 463 aaPredicted RBP3.82□□□□□ -1.8
SSR3-206ENST00000476217 MLXQ9UH92 298 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 NAT8Q9UHE5 227 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 PRELID1Q9Y255 219 aa3.82□□□□□ -1.8
SSR3-206ENST00000476217 FN1P02751 2386 aaKnown RBP3.82□□□□□ -1.8
SSR3-206ENST00000476217 MTORP42345 2549 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 F8P00451 2351 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 IGKV2-40A0A087WW87 121 aaPredicted RBP3.81□□□□□ -1.8
SSR3-206ENST00000476217 TRAV34A0A0B4J273 112 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 SERTM2A0A1B0GWG4 89 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 M0R3E3 92 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 ISLRO14498 428 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 IGKV2D-40P01614 121 aaPredicted RBP3.81□□□□□ -1.8
SSR3-206ENST00000476217 S100A9P06702 114 aaKnown RBP3.81□□□□□ -1.8
SSR3-206ENST00000476217 PRB4P10163 310 aaPredicted RBP3.81□□□□□ -1.8
SSR3-206ENST00000476217 MGST1P10620 155 aaKnown RBP3.81□□□□□ -1.8
SSR3-206ENST00000476217 HLA-DMBP28068 263 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 ID1P41134 155 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 PAFAH1B2P68402 229 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 C10orf91Q5T1B1 145 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 FMC1Q96HJ9 113 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 MS4A6AQ9H2W1 248 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 RPS10P5Q9NQ39 176 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 CLEC5AQ9NY25 188 aa3.81□□□□□ -1.8
SSR3-206ENST00000476217 TRAV8-1A0A0A6YYK1 113 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 ZNF705FA8MVS1 300 aaPredicted RBP3.8□□□□□ -1.8
SSR3-206ENST00000476217 C9JCJ5 164 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 ZNF688P0C7X2 276 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 TAS2R60P59551 318 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 SNRPD3P62318 126 aaKnown RBP3.8□□□□□ -1.8
SSR3-206ENST00000476217 FLI1Q01543 452 aaPredicted RBP3.8□□□□□ -1.8
SSR3-206ENST00000476217 RHEBQ15382 184 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 PSG3Q16557 428 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 TMEM183BQ1AE95 376 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 LCN12Q6JVE5 192 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 C12orf54Q6X4T0 127 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 PRNTQ86SH4 94 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 Q86TA4 180 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 BAGE2Q86Y30 109 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 TMEM61Q8N0U2 210 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 C3orf56Q8N813 242 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 TMEM75Q8N9X5 138 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 NHLRC2Q8NBF2 726 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 OR10J6PQ8NGY7 276 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 TMEM158Q8WZ71 300 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 MRPL53Q96EL3 112 aaKnown RBP3.8□□□□□ -1.8
SSR3-206ENST00000476217 CITED1Q99966 193 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 NDFIP1Q9BT67 221 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 OCR1Q9BZK8 76 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 CUBNO60494 3623 aa3.8□□□□□ -1.8
SSR3-206ENST00000476217 TRBV20OR9-2A0A075B6H5 130 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 TRAV8-2A0A0B4J237 113 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 C7orf77A4D0Y5 90 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 RBAKDNA6NC62 111 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 OR4C46A6NHA9 309 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 FBLL1A6NHQ2 334 aaKnown RBP3.79□□□□□ -1.8
SSR3-206ENST00000476217 B4DEV8 164 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 K7EQG2 157 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 SCO1O75880 301 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 MT-ND4LP03901 98 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 RPL23P62829 140 aaKnown RBP3.79□□□□□ -1.8
SSR3-206ENST00000476217 HIST1H1AQ02539 215 aaPredicted RBP3.79□□□□□ -1.8
SSR3-206ENST00000476217 ERCC8Q13216 396 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 SMUG1Q53HV7 270 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 LBHQ53QV2 105 aaPredicted RBP3.79□□□□□ -1.8
SSR3-206ENST00000476217 PSMG4Q5JS54 123 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 TMEM78Q5T7P6 136 aa3.79□□□□□ -1.8
SSR3-206ENST00000476217 ADAMTSL5Q6ZMM2 481 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms