RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	BAALC	Q8WXS3	180 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997		G3V4G9	280 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	CR1L	Q2VPA4	569 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	MRPL51	Q4U2R6	128 aa	Known RBP	4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997		U3KQE9	123 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	SDHAF1	A6NFY7	115 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	MLANA	Q16655	118 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	ZNF747	Q9BV97	191 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	OTOGL	Q3ZCN5	2332 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	PLXNB1	O43157	2135 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	TMEM213	A2RRL7	107 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	ZNF561-AS1	K7EIQ3	104 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	NDUFB8	O95169	186 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	IGLV2-14	P01704	120 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	RPL15	P61313	204 aa	Known RBP	4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	LINC01620	Q4KN68	170 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997		Q71RC1	249 aa	Predicted RBP	4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	WIPF2	Q8TF74	440 aa	Predicted RBP	4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	USMG5	Q96IX5	58 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	HIGD1B	Q9P298	99 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	NOTCH3	Q9UM47	2321 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	VCAN	P13611	3396 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	TRBV25-1	A0A075B6N4	114 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	UQCRQ	O14949	82 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	PFN2	P35080	140 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	DAD1	P61803	113 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	MRPL23	Q16540	153 aa	Known RBP	4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	ZNF295-AS1	Q8N0V1	137 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	CFAP54	Q96N23	3096 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	RNASE2	P10153	161 aa	Known RBP	4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	DAZAP2	Q15038	168 aa	Predicted RBP	4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	MINOS1	Q5TGZ0	78 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	ZNF493	Q6ZR52	646 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	LINC00643	Q86TS7	51 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	MINOS1-NBL1	R4GNA1	71 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	CLPSL1	A2RUU4	121 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	NDUFS7	O75251	213 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	VWC2	Q2TAL6	325 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	C11orf53	Q8IXP5	236 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	IGHV1-69D	A0A0B4J2H0	117 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997		A0A1W2PNU3	283 aa	Predicted RBP	4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	THBD	P07204	575 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	ZNF134	P52741	427 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	C10orf55	Q5SWW7	151 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997	ZNRD1	Q9P1U0	126 aa		4.88	□□□□□ -1.63
HNRNPU-208	ENST00000475997		A0A087WWL8	130 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	IGHV3-73	A0A0B4J1V6	119 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	C7orf69	Q9H7B7	122 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	RS1	O15537	224 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	WISP2	O76076	250 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	CXCL5	P42830	114 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	PRB3	Q04118	309 aa	Predicted RBP	4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	C20orf173	Q96LM9	149 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	EXPH5	Q8NEV8	1989 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	SPG11	Q96JI7	2443 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	IGKV1-16	P04430	117 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	LINC00479	Q96M42	142 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	SPEG	Q15772	3267 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	IGHV3OR16-10	A0A075B7F0	116 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	IGHV1-46	P01743	117 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	PDE6G	P18545	87 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	RHOH	Q15669	191 aa		4.87	□□□□□ -1.63
HNRNPU-208	ENST00000475997	C15orf65	H3BRN8	121 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	NDUFB1	O75438	58 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	C5orf64	Q2M2E5	130 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	FAM223B	A6NKX1	122 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	CRYGC	P07315	174 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	WFDC2	Q14508	124 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	PRR31	Q5SQ13	230 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	FAM223A	Q8IWN6	122 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	C8orf31	Q8N9H6	132 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	SPRY4	Q9C004	299 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	TLN1	Q9Y490	2541 aa	Known RBP	4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	TRBV10-2	A0A0K0K1G8	114 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	SPTSSB	Q8NFR3	76 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	FAM168A	Q92567	244 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	VSIG2	Q96IQ7	327 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	ATG2A	Q2TAZ0	1938 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	HCFC1	P51610	2035 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	TRBV19	A0A075B6N1	114 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	CRYGB	P07316	175 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997		Q6ZUT4	128 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	CCL19	Q99731	98 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	TMEM14C	Q9P0S9	112 aa		4.86	□□□□□ -1.63
HNRNPU-208	ENST00000475997	NDUFC2-KCTD14	E9PQ53	114 aa		4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997		H0YJW9	148 aa		4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997	ATP5E	P56381	51 aa	Predicted RBP	4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997	NREP	Q16612	68 aa		4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997	UNQ6494/PRO21346	Q6UXR6	183 aa		4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997	CFHR4	Q92496	578 aa		4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997	SIGLEC9	Q9Y336	463 aa		4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997	IGHV1-3	A0A0C4DH29	117 aa		4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997	IGKV3D-7	A0A0C4DH55	119 aa		4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997	BSPH1	Q075Z2	132 aa		4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997	YPEL4	Q96NS1	127 aa		4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997	PRR25	Q96S07	402 aa		4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997	DKK2	Q9UBU2	259 aa		4.85	□□□□□ -1.63
HNRNPU-208	ENST00000475997		M0R1W7	72 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 60 ms