RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 FGF7P21781 194 aa2.15□□□□□ -2.07
SMC5-203ENST00000475540 S100PP25815 95 aa2.15□□□□□ -2.07
SMC5-203ENST00000475540 IDO2Q6ZQW0 420 aa2.15□□□□□ -2.07
SMC5-203ENST00000475540 Q6ZUT4 128 aa2.15□□□□□ -2.07
SMC5-203ENST00000475540 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.15□□□□□ -2.07
SMC5-203ENST00000475540 COPS9Q8WXC6 57 aa2.15□□□□□ -2.07
SMC5-203ENST00000475540 GNG8Q9UK08 70 aa2.15□□□□□ -2.07
SMC5-203ENST00000475540 SNURFQ9Y675 71 aa2.15□□□□□ -2.07
SMC5-203ENST00000475540 GBF1Q92538 1859 aa2.15□□□□□ -2.07
SMC5-203ENST00000475540 CEP192Q8TEP8 1941 aa2.15□□□□□ -2.07
SMC5-203ENST00000475540 BAZ2BQ9UIF8 2168 aaKnown RBP2.15□□□□□ -2.07
SMC5-203ENST00000475540 ADGRB1O14514 1584 aa2.15□□□□□ -2.07
SMC5-203ENST00000475540 PKD1L2Q7Z442 2459 aa2.14□□□□□ -2.07
SMC5-203ENST00000475540 TRAV2A0A0B4J234 112 aa2.14□□□□□ -2.07
SMC5-203ENST00000475540 LINC00299Q6ZSB3 139 aa2.14□□□□□ -2.07
SMC5-203ENST00000475540 C3orf62Q6ZUJ4 267 aa2.14□□□□□ -2.07
SMC5-203ENST00000475540 ZNF625Q96I27 306 aaPredicted RBP2.14□□□□□ -2.07
SMC5-203ENST00000475540 DOCK10Q96BY6 2186 aa2.14□□□□□ -2.07
SMC5-203ENST00000475540 PCDH15Q96QU1 1955 aa2.14□□□□□ -2.07
SMC5-203ENST00000475540 ZNF518AQ6AHZ1 1483 aa2.14□□□□□ -2.07
SMC5-203ENST00000475540 MBD5Q9P267 1494 aa2.14□□□□□ -2.07
SMC5-203ENST00000475540 FREM1Q5H8C1 2179 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 MUC4Q99102 2169 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 FOCADQ5VW36 1801 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 TRAV12-2A0A075B6T6 113 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 A0A1W2PRS3 328 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 MRPS10P82664 201 aaKnown RBP2.13□□□□□ -2.07
SMC5-203ENST00000475540 SLC25A26Q70HW3 274 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 VSTM2AQ8TAG5 236 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 DPH3Q96FX2 82 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 PDCD10Q9BUL8 212 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 SNRNP25Q9BV90 132 aaKnown RBP2.13□□□□□ -2.07
SMC5-203ENST00000475540 ERBINQ96RT1 1412 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 VWDEQ8N2E2 1590 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 MYH6P13533 1939 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 HELZP42694 1942 aaKnown RBP2.13□□□□□ -2.07
SMC5-203ENST00000475540 MYH13Q9UKX3 1938 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 FBN3Q75N90 2809 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 CEP350Q5VT06 3117 aa2.13□□□□□ -2.07
SMC5-203ENST00000475540 ALPK2Q86TB3 2170 aa2.12□□□□□ -2.07
SMC5-203ENST00000475540 M0R2N4 97 aa2.12□□□□□ -2.07
SMC5-203ENST00000475540 INE1O15225 51 aa2.12□□□□□ -2.07
SMC5-203ENST00000475540 OCIAD2Q56VL3 154 aa2.12□□□□□ -2.07
SMC5-203ENST00000475540 MEIG1Q5JSS6 88 aa2.12□□□□□ -2.07
SMC5-203ENST00000475540 MIC13Q5XKP0 118 aa2.12□□□□□ -2.07
SMC5-203ENST00000475540 C15orf53Q8NAA6 179 aa2.12□□□□□ -2.07
SMC5-203ENST00000475540 ZNF563Q8TA94 476 aa2.12□□□□□ -2.07
SMC5-203ENST00000475540 DYNLRB2Q8TF09 96 aa2.12□□□□□ -2.07
SMC5-203ENST00000475540 FCGBPQ9Y6R7 5405 aaPredicted RBP2.12□□□□□ -2.07
SMC5-203ENST00000475540 MYH7P12883 1935 aa2.12□□□□□ -2.07
SMC5-203ENST00000475540 KIDINS220Q9ULH0 1771 aa2.12□□□□□ -2.07
SMC5-203ENST00000475540 IGLV3-32A0A0A0MS00 114 aa2.11□□□□□ -2.07
SMC5-203ENST00000475540 F6UZH7 168 aa2.11□□□□□ -2.07
SMC5-203ENST00000475540 HCRTO43612 131 aa2.11□□□□□ -2.07
SMC5-203ENST00000475540 AKAIN1P0CW23 69 aa2.11□□□□□ -2.07
SMC5-203ENST00000475540 ZNF25P17030 456 aaPredicted RBP2.11□□□□□ -2.07
SMC5-203ENST00000475540 BTG2P78543 158 aa2.11□□□□□ -2.07
SMC5-203ENST00000475540 PCOTHQ58A44 107 aa2.11□□□□□ -2.07
SMC5-203ENST00000475540 CYSTM1Q9H1C7 97 aa2.11□□□□□ -2.07
SMC5-203ENST00000475540 RERGLQ9H628 205 aa2.11□□□□□ -2.07
SMC5-203ENST00000475540 TMEM14CQ9P0S9 112 aa2.11□□□□□ -2.07
SMC5-203ENST00000475540 ADGRB2O60241 1585 aa2.1□□□□□ -2.07
SMC5-203ENST00000475540 KDM6BO15054 1643 aa2.1□□□□□ -2.07
SMC5-203ENST00000475540 LOC110117498A0A087WWA1 95 aa2.1□□□□□ -2.07
SMC5-203ENST00000475540 CCL25O15444 150 aa2.1□□□□□ -2.07
SMC5-203ENST00000475540 POLR2JP52435 117 aaKnown RBP2.1□□□□□ -2.07
SMC5-203ENST00000475540 PPDPFLQ8WWR9 84 aa2.1□□□□□ -2.07
SMC5-203ENST00000475540 TCEAL7Q9BRU2 100 aa2.1□□□□□ -2.07
SMC5-203ENST00000475540 HEATR1Q9H583 2144 aaKnown RBP2.1□□□□□ -2.07
SMC5-203ENST00000475540 ZFP30Q9Y2G7 519 aa2.1□□□□□ -2.07
SMC5-203ENST00000475540 PTPRFP10586 1907 aa2.09□□□□□ -2.07
SMC5-203ENST00000475540 A0A0J9YY99 117 aa2.09□□□□□ -2.07
SMC5-203ENST00000475540 JMJD7-PLA2G4BH0Y9G9 81 aa2.09□□□□□ -2.07
SMC5-203ENST00000475540 PITX3O75364 302 aa2.09□□□□□ -2.07
SMC5-203ENST00000475540 DNAL4O96015 105 aa2.09□□□□□ -2.07
SMC5-203ENST00000475540 PPYP01298 95 aa2.09□□□□□ -2.07
SMC5-203ENST00000475540 RHOHQ15669 191 aa2.09□□□□□ -2.07
SMC5-203ENST00000475540 UNQ5815/PRO19632Q6UWF5 114 aa2.09□□□□□ -2.07
SMC5-203ENST00000475540 UNQ6190/PRO20217Q6UXQ8 127 aa2.09□□□□□ -2.07
SMC5-203ENST00000475540 LINC00322Q6ZN03 302 aaPredicted RBP2.09□□□□□ -2.07
SMC5-203ENST00000475540 PP6455Q8WZ26 134 aa2.09□□□□□ -2.07
SMC5-203ENST00000475540 CFTRP13569 1480 aa2.08□□□□□ -2.08
SMC5-203ENST00000475540 SIP14410 1827 aa2.08□□□□□ -2.08
SMC5-203ENST00000475540 ANK1P16157 1881 aa2.08□□□□□ -2.08
SMC5-203ENST00000475540 LOC100130705A0A1B0GUX0 176 aa2.08□□□□□ -2.08
SMC5-203ENST00000475540 TMEM30CPA0ZSE6 113 aa2.08□□□□□ -2.08
SMC5-203ENST00000475540 CORTO00230 105 aa2.08□□□□□ -2.08
SMC5-203ENST00000475540 KRTAP21-3Q3LHN1 58 aa2.08□□□□□ -2.08
SMC5-203ENST00000475540 NAA60Q9H7X0 242 aa2.08□□□□□ -2.08
SMC5-203ENST00000475540 SCN3BQ9NY72 215 aa2.08□□□□□ -2.08
SMC5-203ENST00000475540 KIF13AQ9H1H9 1805 aa2.07□□□□□ -2.08
SMC5-203ENST00000475540 TRAV17A0A0B4J275 112 aa2.07□□□□□ -2.08
SMC5-203ENST00000475540 IGKV3D-7A0A0C4DH55 119 aa2.07□□□□□ -2.08
SMC5-203ENST00000475540 IGKV3OR2-268A0A0C4DH90 116 aa2.07□□□□□ -2.08
SMC5-203ENST00000475540 CCDC179H3BU77 68 aa2.07□□□□□ -2.08
SMC5-203ENST00000475540 OR2T2Q6IF00 324 aa2.07□□□□□ -2.08
SMC5-203ENST00000475540 PLPP5Q8NEB5 264 aa2.07□□□□□ -2.08
SMC5-203ENST00000475540 C12orf57Q99622 126 aa2.07□□□□□ -2.08
SMC5-203ENST00000475540 LRP5O75197 1615 aa2.06□□□□□ -2.08
SMC5-203ENST00000475540 IL7P13232 177 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms