RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 MUC21Q5SSG8 566 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 SAPCD1Q5SSQ6 148 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 ZNF767PQ75MW2 155 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 TMEM183AQ8IXX5 376 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 IL17DQ8TAD2 202 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 TXNDC17Q9BRA2 123 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 PYGO2Q9BRQ0 406 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 NIPSNAP3BQ9BS92 247 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 MDFICQ9P1T7 246 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 DKK2Q9UBU2 259 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 ZFP30Q9Y2G7 519 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 PDE6DO43924 150 aa4.96□□□□□ -1.62
LIMD1-204ENST00000474665 IFNA1P01562 189 aa4.96□□□□□ -1.62
LIMD1-204ENST00000474665 PFN1P07737 140 aaKnown RBP4.96□□□□□ -1.62
LIMD1-204ENST00000474665 TAGLN2P37802 199 aaKnown RBP4.96□□□□□ -1.62
LIMD1-204ENST00000474665 SMUG1Q53HV7 270 aa4.96□□□□□ -1.62
LIMD1-204ENST00000474665 CENPWQ5EE01 88 aa4.96□□□□□ -1.62
LIMD1-204ENST00000474665 FAM222AQ5U5X8 452 aa4.96□□□□□ -1.62
LIMD1-204ENST00000474665 ZNF493Q6ZR52 646 aa4.96□□□□□ -1.62
LIMD1-204ENST00000474665 BAGE2Q86Y30 109 aa4.96□□□□□ -1.62
LIMD1-204ENST00000474665 EIF4E3Q8N5X7 224 aaKnown RBP4.96□□□□□ -1.62
LIMD1-204ENST00000474665 LINC00612Q8N6U2 182 aa4.96□□□□□ -1.62
LIMD1-204ENST00000474665 TMEM263Q8WUH6 116 aaKnown RBP4.96□□□□□ -1.62
LIMD1-204ENST00000474665 GSN-AS1Q9NRJ2 163 aa4.96□□□□□ -1.62
LIMD1-204ENST00000474665 MED9Q9NWA0 146 aa4.96□□□□□ -1.62
LIMD1-204ENST00000474665 TRAV21A0A0B4J279 112 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 IGHV3-16A0A0C4DH30 117 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 TMEM250H0YL14 139 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 K7EN84 100 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 RGS13O14921 159 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 SH2D1AO60880 128 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 NDUFS6O75380 124 aaKnown RBP4.95□□□□□ -1.62
LIMD1-204ENST00000474665 TYMSP04818 313 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 S100A9P06702 114 aaKnown RBP4.95□□□□□ -1.62
LIMD1-204ENST00000474665 TCL1AP56279 114 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 UBE2G1P62253 170 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 CLLU1Q5K131 121 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 Q6ZTC4 211 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 C16orf74Q96GX8 76 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 NDFIP1Q9BT67 221 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 NOP10Q9NPE3 64 aaKnown RBP4.95□□□□□ -1.62
LIMD1-204ENST00000474665 NAGKQ9UJ70 344 aa4.95□□□□□ -1.62
LIMD1-204ENST00000474665 TMEM189A5PLL7 270 aa4.94□□□□□ -1.62
LIMD1-204ENST00000474665 CBY3A6NI87 242 aa4.94□□□□□ -1.62
LIMD1-204ENST00000474665 FABP5P3A8MUU1 101 aa4.94□□□□□ -1.62
LIMD1-204ENST00000474665 KRBOX1C9JBD0 128 aa4.94□□□□□ -1.62
LIMD1-204ENST00000474665 C9JCJ5 164 aa4.94□□□□□ -1.62
LIMD1-204ENST00000474665 RNASE3P12724 160 aaKnown RBP4.94□□□□□ -1.62
LIMD1-204ENST00000474665 RPL19P84098 196 aaKnown RBP4.94□□□□□ -1.62
LIMD1-204ENST00000474665 DAZ2Q13117 558 aaKnown RBP4.94□□□□□ -1.62
LIMD1-204ENST00000474665 FAM162BQ5T6X4 162 aa4.94□□□□□ -1.62
LIMD1-204ENST00000474665 Q6ZTI0 123 aa4.94□□□□□ -1.62
LIMD1-204ENST00000474665 OCC1Q8TAD7 63 aa4.94□□□□□ -1.62
LIMD1-204ENST00000474665 C11orf45Q8TAV5 145 aa4.94□□□□□ -1.62
LIMD1-204ENST00000474665 EIF5A2Q9GZV4 153 aaKnown RBP4.94□□□□□ -1.62
LIMD1-204ENST00000474665 PARLQ9H300 379 aa4.94□□□□□ -1.62
LIMD1-204ENST00000474665 C19orf71A6NCJ1 209 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 CXorf65A6NEN9 183 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 LYRM9A8MSI8 78 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 M0R036 132 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 SPINK4O60575 86 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 SPART-AS1P0CW21 52 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 DEFB130BP0DP73 79 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 DEFB130AP0DP74 79 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 GNG4P50150 75 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 KMT2AQ03164 3969 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 OR5I1Q13606 314 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 LINC01559Q495D7 138 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 IBA57Q5T440 356 aaKnown RBP4.93□□□□□ -1.62
LIMD1-204ENST00000474665 FAM159AQ6UWV7 190 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 POM121L12Q8N7R1 296 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 C9orf85Q96MD7 179 aa4.93□□□□□ -1.62
LIMD1-204ENST00000474665 TIMM8BQ9Y5J9 83 aaPredicted RBP4.93□□□□□ -1.62
LIMD1-204ENST00000474665 TMSB15BA0A087X1C1 80 aa4.92□□□□□ -1.62
LIMD1-204ENST00000474665 GRIFINA4D1Z8 144 aa4.92□□□□□ -1.62
LIMD1-204ENST00000474665 ORM1P02763 201 aa4.92□□□□□ -1.62
LIMD1-204ENST00000474665 DNLZQ5SXM8 178 aa4.92□□□□□ -1.62
LIMD1-204ENST00000474665 PRR27Q6MZM9 219 aa4.92□□□□□ -1.62
LIMD1-204ENST00000474665 PHLDA1Q8WV24 401 aaPredicted RBP4.92□□□□□ -1.62
LIMD1-204ENST00000474665 SDF2L1Q9HCN8 221 aa4.92□□□□□ -1.62
LIMD1-204ENST00000474665 SCRT2Q9NQ03 307 aa4.92□□□□□ -1.62
LIMD1-204ENST00000474665 MRPL16Q9NX20 251 aaKnown RBP4.92□□□□□ -1.62
LIMD1-204ENST00000474665 DNAH6Q9C0G6 4158 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 TRGV11A0A075B6L2 103 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 TRGV1A0A0A0MS02 117 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 GAGE12BA1L429 117 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 SNURFLB1AK76 121 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 B4DEV8 164 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 GAGE7O76087 117 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 GAGE12FP0CL80 117 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 GAGE12GP0CL81 117 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 GAGE12IP0CL82 117 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 GZMBP10144 247 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 MGST1P10620 155 aaKnown RBP4.91□□□□□ -1.62
LIMD1-204ENST00000474665 HOXA5P20719 270 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 CEBPGP53567 150 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 RAB14P61106 215 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 DAD1P61803 113 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 ZNF415Q09FC8 603 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 PEA15Q15121 130 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms