RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	TCTE3	Q8IZS6	198 aa		0.77	□□□□□ -2.29
BBX-223	ENST00000473542	ARHGAP31	Q2M1Z3	1444 aa		0.77	□□□□□ -2.29
BBX-223	ENST00000473542	UNC13A	Q9UPW8	1703 aa		0.77	□□□□□ -2.29
BBX-223	ENST00000473542		A0A0G2JMM0	328 aa		0.76	□□□□□ -2.29
BBX-223	ENST00000473542	TNFSF15	O95150	251 aa		0.76	□□□□□ -2.29
BBX-223	ENST00000473542	DBI	P07108	87 aa	Known RBP	0.76	□□□□□ -2.29
BBX-223	ENST00000473542	TMEM91	Q6ZNR0	172 aa		0.76	□□□□□ -2.29
BBX-223	ENST00000473542	COMMD3	Q9UBI1	195 aa		0.76	□□□□□ -2.29
BBX-223	ENST00000473542	NBDY	A0A0U1RRE5	68 aa		0.75	□□□□□ -2.29
BBX-223	ENST00000473542		C9JAW5	83 aa		0.75	□□□□□ -2.29
BBX-223	ENST00000473542	CDC42EP2	O14613	210 aa		0.75	□□□□□ -2.29
BBX-223	ENST00000473542	ADCYAP1	P18509	176 aa		0.75	□□□□□ -2.29
BBX-223	ENST00000473542	PLGLB1	Q02325	96 aa		0.75	□□□□□ -2.29
BBX-223	ENST00000473542	FXYD3	Q14802	87 aa		0.75	□□□□□ -2.29
BBX-223	ENST00000473542	SPINK13	Q1W4C9	94 aa		0.75	□□□□□ -2.29
BBX-223	ENST00000473542	GLYATL3	Q5SZD4	288 aa		0.75	□□□□□ -2.29
BBX-223	ENST00000473542	AIF1L	Q9BQI0	150 aa		0.75	□□□□□ -2.29
BBX-223	ENST00000473542	CALML5	Q9NZT1	146 aa		0.75	□□□□□ -2.29
BBX-223	ENST00000473542	HIGD1A	Q9Y241	93 aa		0.75	□□□□□ -2.29
BBX-223	ENST00000473542	MORN2	Q502X0	79 aa		0.74	□□□□□ -2.29
BBX-223	ENST00000473542	TMEM244	Q5VVB8	128 aa		0.74	□□□□□ -2.29
BBX-223	ENST00000473542	ATG5	Q9H1Y0	275 aa		0.74	□□□□□ -2.29
BBX-223	ENST00000473542	ASH1L	Q9NR48	2969 aa	Known RBP	0.74	□□□□□ -2.29
BBX-223	ENST00000473542	KIDINS220	Q9ULH0	1771 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	AHNAK	Q09666	5890 aa	Known RBP	0.73	□□□□□ -2.29
BBX-223	ENST00000473542	TRAV2	A0A0B4J234	112 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	SMIM24	O75264	130 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	OR2H2	O95918	312 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	MT-ND4L	P03901	98 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	CD3D	P04234	171 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	HLA-DRB4	P13762	266 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	CMPK1	P30085	196 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	C6orf52	Q5T4I8	152 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	C5orf56	Q8N8D9	126 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	LINC00208	Q96KT6	92 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	SLC35B3	Q9H1N7	401 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	HLA-DRB4	X5D2U9	266 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	UHRF1BP1L	A0JNW5	1464 aa		0.73	□□□□□ -2.29
BBX-223	ENST00000473542	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.72	□□□□□ -2.29
BBX-223	ENST00000473542		A0A1B0GW64	132 aa		0.72	□□□□□ -2.29
BBX-223	ENST00000473542	IGKC	P01834	107 aa		0.72	□□□□□ -2.29
BBX-223	ENST00000473542	KDELR1	P24390	212 aa		0.72	□□□□□ -2.29
BBX-223	ENST00000473542	PPDPFL	Q8WWR9	84 aa		0.72	□□□□□ -2.29
BBX-223	ENST00000473542	DNAJC15	Q9Y5T4	150 aa		0.72	□□□□□ -2.29
BBX-223	ENST00000473542	MYH1	P12882	1939 aa		0.72	□□□□□ -2.29
BBX-223	ENST00000473542	LOC101927531	A0A1B0GV80	90 aa		0.71	□□□□□ -2.3
BBX-223	ENST00000473542	YPEL1	O60688	119 aa		0.71	□□□□□ -2.3
BBX-223	ENST00000473542	IL7	P13232	177 aa		0.71	□□□□□ -2.3
BBX-223	ENST00000473542	AKR1D1	P51857	326 aa		0.71	□□□□□ -2.3
BBX-223	ENST00000473542	TAS2R8	Q9NYW2	309 aa		0.71	□□□□□ -2.3
BBX-223	ENST00000473542	CDK12	Q9NYV4	1490 aa	Predicted RBP	0.71	□□□□□ -2.3
BBX-223	ENST00000473542	KDM5C	P41229	1560 aa		0.7	□□□□□ -2.3
BBX-223	ENST00000473542	KCP	Q6ZWJ8	1503 aa		0.7	□□□□□ -2.3
BBX-223	ENST00000473542	TRBV10-1	A0A0K0K1A3	114 aa		0.7	□□□□□ -2.3
BBX-223	ENST00000473542	POLR2J	P52435	117 aa	Known RBP	0.7	□□□□□ -2.3
BBX-223	ENST00000473542	UNQ5815/PRO19632	Q6UWF5	114 aa		0.7	□□□□□ -2.3
BBX-223	ENST00000473542	VPS25	Q9BRG1	176 aa		0.7	□□□□□ -2.3
BBX-223	ENST00000473542	BANF2	Q9H503	90 aa		0.7	□□□□□ -2.3
BBX-223	ENST00000473542	PLAC8	Q9NZF1	115 aa		0.7	□□□□□ -2.3
BBX-223	ENST00000473542	RPL37	P61927	97 aa	Known RBP	0.69	□□□□□ -2.3
BBX-223	ENST00000473542	BLM	P54132	1417 aa	Predicted RBP	0.69	□□□□□ -2.3
BBX-223	ENST00000473542	ZCCHC6	Q5VYS8	1495 aa	Known RBP	0.68	□□□□□ -2.3
BBX-223	ENST00000473542	LRP5	O75197	1615 aa		0.68	□□□□□ -2.3
BBX-223	ENST00000473542	ATG2A	Q2TAZ0	1938 aa		0.68	□□□□□ -2.3
BBX-223	ENST00000473542	RBP4	P02753	201 aa		0.68	□□□□□ -2.3
BBX-223	ENST00000473542	CCK	P06307	115 aa		0.68	□□□□□ -2.3
BBX-223	ENST00000473542	SPINK7	P58062	85 aa		0.68	□□□□□ -2.3
BBX-223	ENST00000473542	KLKP1	Q107X0	134 aa		0.68	□□□□□ -2.3
BBX-223	ENST00000473542	SLC25A26	Q70HW3	274 aa		0.68	□□□□□ -2.3
BBX-223	ENST00000473542	ATP6V0E2	Q8NHE4	81 aa		0.68	□□□□□ -2.3
BBX-223	ENST00000473542	CCDC171	Q6TFL3	1326 aa		0.67	□□□□□ -2.3
BBX-223	ENST00000473542	TRPM7	Q96QT4	1865 aa		0.67	□□□□□ -2.3
BBX-223	ENST00000473542	SPTB	P11277	2137 aa		0.67	□□□□□ -2.3
BBX-223	ENST00000473542	CXorf51A	A0A1B0GTR3	108 aa		0.67	□□□□□ -2.3
BBX-223	ENST00000473542	ZNF56	Q15929	161 aa		0.67	□□□□□ -2.3
BBX-223	ENST00000473542	FAM103A1	Q9BTL3	118 aa	Known RBP	0.67	□□□□□ -2.3
BBX-223	ENST00000473542	BCORL1	Q5H9F3	1711 aa		0.67	□□□□□ -2.3
BBX-223	ENST00000473542	ZNF462	Q96JM2	2506 aa		0.66	□□□□□ -2.3
BBX-223	ENST00000473542	TEX49	A0A1B0GTD5	131 aa		0.66	□□□□□ -2.3
BBX-223	ENST00000473542	LY6G6C	O95867	125 aa		0.66	□□□□□ -2.3
BBX-223	ENST00000473542	CPD	O75976	1380 aa		0.66	□□□□□ -2.3
BBX-223	ENST00000473542	ZDBF2	Q9HCK1	2354 aa		0.65	□□□□□ -2.3
BBX-223	ENST00000473542	DLEC1	Q9Y238	1755 aa		0.65	□□□□□ -2.3
BBX-223	ENST00000473542	IQCJ	Q1A5X6	159 aa		0.65	□□□□□ -2.31
BBX-223	ENST00000473542	ATP11AUN	Q6ZP68	121 aa		0.65	□□□□□ -2.31
BBX-223	ENST00000473542	NDUFA11	Q86Y39	141 aa		0.65	□□□□□ -2.31
BBX-223	ENST00000473542	BATF3	Q9NR55	127 aa		0.65	□□□□□ -2.31
BBX-223	ENST00000473542	FXYD1	O00168	92 aa		0.64	□□□□□ -2.31
BBX-223	ENST00000473542	PRH1	P02810	166 aa		0.64	□□□□□ -2.31
BBX-223	ENST00000473542	TMEM14B	Q9NUH8	114 aa		0.64	□□□□□ -2.31
BBX-223	ENST00000473542	NIN	Q8N4C6	2090 aa		0.64	□□□□□ -2.31
BBX-223	ENST00000473542	OVOS2	A0A0J9YW53	1432 aa		0.64	□□□□□ -2.31
BBX-223	ENST00000473542	OVOS2	Q6IE36	1432 aa		0.64	□□□□□ -2.31
BBX-223	ENST00000473542	RREB1	Q92766	1687 aa		0.63	□□□□□ -2.31
BBX-223	ENST00000473542		A0A096LNT2	108 aa		0.63	□□□□□ -2.31
BBX-223	ENST00000473542		M0R2P5	195 aa		0.63	□□□□□ -2.31
BBX-223	ENST00000473542	APOC1	P02654	83 aa		0.63	□□□□□ -2.31
BBX-223	ENST00000473542	ALX1	Q15699	326 aa		0.63	□□□□□ -2.31
BBX-223	ENST00000473542	SNX29P2	Q8IUI4	249 aa		0.63	□□□□□ -2.31
BBX-223	ENST00000473542	MMGT1	Q8N4V1	131 aa		0.63	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms