RNA–Protein interactions for RNA: ENST00000472856.1

SOX2-OT-205, SOX2 overlapping transcript, humanhuman

TSL 2

Gene SOX2-OT, Length 454 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-205ENST00000472856 QRICH2Q9H0J4 1663 aa3.42□□□□□ -1.86
SOX2-OT-205ENST00000472856 IL5P05113 134 aa3.41□□□□□ -1.86
SOX2-OT-205ENST00000472856 Q56UQ5 140 aa3.41□□□□□ -1.86
SOX2-OT-205ENST00000472856 FAM74A1Q5RGS3 127 aa3.41□□□□□ -1.86
SOX2-OT-205ENST00000472856 MRPL54Q6P161 138 aaKnown RBP3.41□□□□□ -1.86
SOX2-OT-205ENST00000472856 COA5Q86WW8 74 aa3.41□□□□□ -1.86
SOX2-OT-205ENST00000472856 PLPP5Q8NEB5 264 aa3.41□□□□□ -1.86
SOX2-OT-205ENST00000472856 DYNLRB2Q8TF09 96 aa3.41□□□□□ -1.86
SOX2-OT-205ENST00000472856 PATE1Q8WXA2 126 aa3.41□□□□□ -1.86
SOX2-OT-205ENST00000472856 ALPK3Q96L96 1907 aa3.4□□□□□ -1.86
SOX2-OT-205ENST00000472856 KTN1Q86UP2 1357 aaKnown RBP3.4□□□□□ -1.86
SOX2-OT-205ENST00000472856 TRAV17A0A0B4J275 112 aa3.4□□□□□ -1.87
SOX2-OT-205ENST00000472856 CCL16O15467 120 aa3.4□□□□□ -1.87
SOX2-OT-205ENST00000472856 TNFP01375 233 aa3.4□□□□□ -1.87
SOX2-OT-205ENST00000472856 PRB4P10163 310 aaPredicted RBP3.4□□□□□ -1.87
SOX2-OT-205ENST00000472856 COX7CP15954 63 aa3.4□□□□□ -1.87
SOX2-OT-205ENST00000472856 CATR1Q13166 79 aa3.4□□□□□ -1.87
SOX2-OT-205ENST00000472856 C3orf62Q6ZUJ4 267 aa3.4□□□□□ -1.87
SOX2-OT-205ENST00000472856 VPS8Q8N3P4 1428 aa3.4□□□□□ -1.87
SOX2-OT-205ENST00000472856 LSM10Q969L4 123 aaKnown RBP3.4□□□□□ -1.87
SOX2-OT-205ENST00000472856 SPTSSAQ969W0 71 aa3.4□□□□□ -1.87
SOX2-OT-205ENST00000472856 TMEM242Q9NWH2 141 aa3.4□□□□□ -1.87
SOX2-OT-205ENST00000472856 CASZ1Q86V15 1759 aa3.4□□□□□ -1.87
SOX2-OT-205ENST00000472856 CITO14578 2027 aa3.39□□□□□ -1.87
SOX2-OT-205ENST00000472856 TMEM218A2RU14 115 aa3.39□□□□□ -1.87
SOX2-OT-205ENST00000472856 MCRIP1C9JLW8 97 aa3.39□□□□□ -1.87
SOX2-OT-205ENST00000472856 GEMIN2O14893 280 aaKnown RBP3.39□□□□□ -1.87
SOX2-OT-205ENST00000472856 BRD3OSQ6XYD6 125 aa3.39□□□□□ -1.87
SOX2-OT-205ENST00000472856 IER3IP1Q9Y5U9 82 aa3.39□□□□□ -1.87
SOX2-OT-205ENST00000472856 LRP5O75197 1615 aa3.39□□□□□ -1.87
SOX2-OT-205ENST00000472856 STRCP1A6NGW2 1772 aa3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 A0A1W2PRS3 328 aa3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 H3BRM9 83 aa3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 APOC4-APOC2K7ER74 178 aa3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 CCL25O15444 150 aa3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 SNCGO76070 127 aa3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 APOC2P02655 101 aa3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 IGKV4-1P06312 121 aa3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 PIRTP0C851 137 aa3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 RNASE3P12724 160 aaKnown RBP3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 C8orf59Q8N0T1 100 aaPredicted RBP3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 MRPL57Q9BQC6 102 aaKnown RBP3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 REG4Q9BYZ8 158 aa3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 BCORL1Q5H9F3 1711 aa3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 BAZ2BQ9UIF8 2168 aaKnown RBP3.38□□□□□ -1.87
SOX2-OT-205ENST00000472856 TRBV6-5A0A0K0K1A5 114 aa3.37□□□□□ -1.87
SOX2-OT-205ENST00000472856 POLR2JP52435 117 aaKnown RBP3.37□□□□□ -1.87
SOX2-OT-205ENST00000472856 C9orf153Q5TBE3 101 aa3.37□□□□□ -1.87
SOX2-OT-205ENST00000472856 Q6AWC8 147 aa3.37□□□□□ -1.87
SOX2-OT-205ENST00000472856 KLK9Q9UKQ9 250 aa3.37□□□□□ -1.87
SOX2-OT-205ENST00000472856 MDC1Q14676 2089 aaKnown RBP3.37□□□□□ -1.87
SOX2-OT-205ENST00000472856 FN1P02751 2386 aaKnown RBP3.36□□□□□ -1.87
SOX2-OT-205ENST00000472856 PIPP12273 146 aaPredicted RBP3.36□□□□□ -1.87
SOX2-OT-205ENST00000472856 IL7P13232 177 aa3.36□□□□□ -1.87
SOX2-OT-205ENST00000472856 HSD52Q0P140 79 aa3.36□□□□□ -1.87
SOX2-OT-205ENST00000472856 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
SOX2-OT-205ENST00000472856 RPRMQ9NS64 109 aa3.36□□□□□ -1.87
SOX2-OT-205ENST00000472856 CECR2Q9BXF3 1484 aa3.35□□□□□ -1.87
SOX2-OT-205ENST00000472856 FREM1Q5H8C1 2179 aa3.35□□□□□ -1.87
SOX2-OT-205ENST00000472856 TRAV30A0A087WSZ9 112 aa3.35□□□□□ -1.87
SOX2-OT-205ENST00000472856 NDUFB6O95139 128 aa3.35□□□□□ -1.87
SOX2-OT-205ENST00000472856 SPANXN1Q5VSR9 72 aa3.35□□□□□ -1.87
SOX2-OT-205ENST00000472856 Q6ZRN7 208 aaPredicted RBP3.35□□□□□ -1.87
SOX2-OT-205ENST00000472856 Q6ZS92 163 aa3.35□□□□□ -1.87
SOX2-OT-205ENST00000472856 ACBD7Q8N6N7 88 aa3.35□□□□□ -1.87
SOX2-OT-205ENST00000472856 SPANXDQ9BXN6 97 aa3.35□□□□□ -1.87
SOX2-OT-205ENST00000472856 RTTNQ86VV8 2226 aa3.35□□□□□ -1.87
SOX2-OT-205ENST00000472856 TRAV2A0A0B4J234 112 aa3.34□□□□□ -1.87
SOX2-OT-205ENST00000472856 TRBV6-4A0A1B0GX49 114 aa3.34□□□□□ -1.87
SOX2-OT-205ENST00000472856 IGHV3-33P01772 117 aa3.34□□□□□ -1.87
SOX2-OT-205ENST00000472856 UNQ5815/PRO19632Q6UWF5 114 aa3.34□□□□□ -1.87
SOX2-OT-205ENST00000472856 SVBPQ8N300 66 aa3.34□□□□□ -1.87
SOX2-OT-205ENST00000472856 NDUFA12Q9UI09 145 aa3.34□□□□□ -1.87
SOX2-OT-205ENST00000472856 SIP14410 1827 aa3.34□□□□□ -1.87
SOX2-OT-205ENST00000472856 NINQ8N4C6 2090 aa3.34□□□□□ -1.88
SOX2-OT-205ENST00000472856 ZFYVE16Q7Z3T8 1539 aa3.34□□□□□ -1.88
SOX2-OT-205ENST00000472856 NRKQ7Z2Y5 1582 aa3.34□□□□□ -1.88
SOX2-OT-205ENST00000472856 J3QRE1 110 aa3.33□□□□□ -1.88
SOX2-OT-205ENST00000472856 IGKCP01834 107 aa3.33□□□□□ -1.88
SOX2-OT-205ENST00000472856 RHOHQ15669 191 aa3.33□□□□□ -1.88
SOX2-OT-205ENST00000472856 DOCK10Q96BY6 2186 aa3.33□□□□□ -1.88
SOX2-OT-205ENST00000472856 PLXNA2O75051 1894 aa3.33□□□□□ -1.88
SOX2-OT-205ENST00000472856 M0R143 59 aa3.32□□□□□ -1.88
SOX2-OT-205ENST00000472856 IFNA17P01571 189 aa3.32□□□□□ -1.88
SOX2-OT-205ENST00000472856 NCMAPQ5T1S8 102 aa3.32□□□□□ -1.88
SOX2-OT-205ENST00000472856 C10orf105Q8TEF2 133 aa3.32□□□□□ -1.88
SOX2-OT-205ENST00000472856 COL5A3P25940 1745 aaPredicted RBP3.31□□□□□ -1.88
SOX2-OT-205ENST00000472856 TMEM30CPA0ZSE6 113 aa3.31□□□□□ -1.88
SOX2-OT-205ENST00000472856 OOSP1A8MZH6 123 aa3.31□□□□□ -1.88
SOX2-OT-205ENST00000472856 IQCJQ1A5X6 159 aa3.31□□□□□ -1.88
SOX2-OT-205ENST00000472856 S100A7L2Q5SY68 101 aa3.31□□□□□ -1.88
SOX2-OT-205ENST00000472856 CSAG1Q6PB30 78 aa3.31□□□□□ -1.88
SOX2-OT-205ENST00000472856 C15orf53Q8NAA6 179 aa3.31□□□□□ -1.88
SOX2-OT-205ENST00000472856 PPDPFLQ8WWR9 84 aa3.31□□□□□ -1.88
SOX2-OT-205ENST00000472856 LINC00526Q96FQ7 95 aa3.31□□□□□ -1.88
SOX2-OT-205ENST00000472856 LIMD2Q9BT23 127 aa3.31□□□□□ -1.88
SOX2-OT-205ENST00000472856 MCM3APO60318 1980 aa3.31□□□□□ -1.88
SOX2-OT-205ENST00000472856 MAPKBP1O60336 1514 aa3.3□□□□□ -1.88
SOX2-OT-205ENST00000472856 TFF1P04155 84 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms