RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 GPN1Q9HCN4 374 aaPredicted RBP2.38□□□□□ -2.03
XRN1-209ENST00000472625 DNAJC4Q9NNZ3 241 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 UQCC1Q9NVA1 299 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 TMEM14CQ9P0S9 112 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 HHLA3Q9XRX5 114 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 TIMM9Q9Y5J7 89 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 LENEPQ9Y5L5 61 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 DNAH8Q96JB1 4490 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 TRBV19A0A075B6N1 114 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 IGHV3-38A0A0C4DH36 116 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 C9orf170A2RU37 121 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 RBAKDNA6NC62 111 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 C17orf112F2Z3M2 114 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 K7EQD1 137 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 NDUFB6O95139 128 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 PFN1P07737 140 aaKnown RBP2.37□□□□□ -2.03
XRN1-209ENST00000472625 CFC1BP0CG36 223 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 CFC1P0CG37 223 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 S100A11P31949 105 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 RPL29P47914 159 aaKnown RBP2.37□□□□□ -2.03
XRN1-209ENST00000472625 SULT1A1P50225 295 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 BCAP31P51572 246 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 CAV2P51636 162 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 CRYBA4P53673 196 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 SEC61BP60468 96 aaKnown RBP2.37□□□□□ -2.03
XRN1-209ENST00000472625 BAXQ07812 192 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 OPCMLQ14982 345 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 ATP6V1FQ16864 119 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 ACOT6Q3I5F7 207 aaPredicted RBP2.37□□□□□ -2.03
XRN1-209ENST00000472625 LINC01556Q5JQF7 62 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 FAM74A1Q5RGS3 127 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 FAM159AQ6UWV7 190 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 IQCF2Q8IXL9 164 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 C11orf72Q8NBR9 251 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 OR10G4Q8NGN3 311 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 DEFB104AQ8WTQ1 72 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 TMEM37Q8WXS4 190 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 RMI2Q96E14 147 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 VSIG2Q96IQ7 327 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 MRPL32Q9BYC8 188 aaKnown RBP2.37□□□□□ -2.03
XRN1-209ENST00000472625 SLIRPQ9GZT3 109 aaKnown RBP2.37□□□□□ -2.03
XRN1-209ENST00000472625 SLC25A31Q9H0C2 315 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 GSN-AS1Q9NRJ2 163 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 KLF12Q9Y4X4 402 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 NACAE9PAV3 2078 aa2.37□□□□□ -2.03
XRN1-209ENST00000472625 UBR4Q5T4S7 5183 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 TRAV8-3A0A0A6YYJ7 113 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 TRAV4A0A0B4J268 109 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 UBE2L5PA0A1B0GUS4 154 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 SERTM2A0A1B0GWG4 89 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 C7orf66A4D0T2 115 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 H3BMQ9 156 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 J3KRW8 73 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 SLC17A3O00476 420 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 RS1O15537 224 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 PRM2P04554 102 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 PET100P0DJ07 73 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 SMIM18P0DKX4 95 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 CT45A10P0DMU9 189 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 RNASE4P34096 147 aaKnown RBP2.36□□□□□ -2.03
XRN1-209ENST00000472625 ZNF138P52744 262 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 TAS2R45P59539 299 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 BTN1A1Q13410 526 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 SPCS2Q15005 226 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 RHOHQ15669 191 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 VWC2Q2TAL6 325 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 ZFP69Q49AA0 526 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 KHDC3LQ587J8 217 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 OR10J3Q5JRS4 329 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 KCNIP4Q6PIL6 250 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 LYPD5Q6UWN5 251 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 PATE2Q6UY27 113 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 PQLC2Q6ZP29 291 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 TMEM182Q6ZP80 229 aaPredicted RBP2.36□□□□□ -2.03
XRN1-209ENST00000472625 NRARPQ7Z6K4 114 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 Q8N814 137 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 NHLRC2Q8NBF2 726 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 OR4C5Q8NGB2 326 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 OR10G9Q8NGN4 311 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 CMTM2Q8TAZ6 248 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 MITD1Q8WV92 249 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 RASL10AQ92737 203 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 SAT2Q96F10 170 aaPredicted RBP2.36□□□□□ -2.03
XRN1-209ENST00000472625 KCNS1Q96KK3 526 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 FAM19A4Q96LR4 140 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 MGST2Q99735 147 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 SOSTQ9BQB4 213 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 PRADC1Q9BSG0 188 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 NDFIP1Q9BT67 221 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 NAA50Q9GZZ1 169 aaKnown RBP2.36□□□□□ -2.03
XRN1-209ENST00000472625 OR51M1Q9H341 326 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 LYRM2Q9NU23 88 aaPredicted RBP2.36□□□□□ -2.03
XRN1-209ENST00000472625 GSKIPQ9P0R6 139 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 ZNF492Q9P255 531 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 TP53TG3Q9ULZ0 132 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 WDR83OSQ9Y284 106 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 RCL1Q9Y2P8 373 aaKnown RBP2.36□□□□□ -2.03
XRN1-209ENST00000472625 V9GYH0 126 aa2.36□□□□□ -2.03
XRN1-209ENST00000472625 A0A087WWC5 75 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 TRAV21A0A0B4J279 112 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms