RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 ZNF575Q86XF7 245 aa14.41□□□□□ -0.1
SREBF1-210ENST00000471445 SGK494Q96LW2 274 aa14.41□□□□□ -0.1
SREBF1-210ENST00000471445 C8orf49Q96NF6 230 aa14.41□□□□□ -0.1
SREBF1-210ENST00000471445 NDFIP1Q9BT67 221 aa14.41□□□□□ -0.1
SREBF1-210ENST00000471445 SFTA3P0C7M3 94 aa14.4□□□□□ -0.1
SREBF1-210ENST00000471445 IQCF2Q8IXL9 164 aa14.4□□□□□ -0.1
SREBF1-210ENST00000471445 ZNF479Q96JC4 524 aa14.4□□□□□ -0.1
SREBF1-210ENST00000471445 HHLA3Q9XRX5 114 aa14.4□□□□□ -0.1
SREBF1-210ENST00000471445 RYR1P21817 5038 aa14.39□□□□□ -0.11
SREBF1-210ENST00000471445 TRGV4A0A0C4DH28 118 aa14.39□□□□□ -0.11
SREBF1-210ENST00000471445 GNRH2O43555 120 aa14.39□□□□□ -0.11
SREBF1-210ENST00000471445 IGLV2-11P01706 119 aa14.39□□□□□ -0.11
SREBF1-210ENST00000471445 ZNF726P1Q15940 193 aa14.39□□□□□ -0.11
SREBF1-210ENST00000471445 SDF2L1Q9HCN8 221 aa14.39□□□□□ -0.11
SREBF1-210ENST00000471445 TRAV4A0A0B4J268 109 aa14.38□□□□□ -0.11
SREBF1-210ENST00000471445 CTXND1A0A1B0GTU2 59 aa14.38□□□□□ -0.11
SREBF1-210ENST00000471445 K7EQM0 130 aa14.38□□□□□ -0.11
SREBF1-210ENST00000471445 M0R2P5 195 aa14.38□□□□□ -0.11
SREBF1-210ENST00000471445 BTF3P20290 206 aaKnown RBP14.38□□□□□ -0.11
SREBF1-210ENST00000471445 SUMO1P63165 101 aaKnown RBP14.38□□□□□ -0.11
SREBF1-210ENST00000471445 MRPL23Q16540 153 aaKnown RBP14.38□□□□□ -0.11
SREBF1-210ENST00000471445 CYB561D1Q8N8Q1 229 aa14.38□□□□□ -0.11
SREBF1-210ENST00000471445 TMEM75Q8N9X5 138 aa14.38□□□□□ -0.11
SREBF1-210ENST00000471445 KCNS1Q96KK3 526 aa14.38□□□□□ -0.11
SREBF1-210ENST00000471445 EPDR1Q9UM22 224 aa14.38□□□□□ -0.11
SREBF1-210ENST00000471445 PSG8Q9UQ74 426 aa14.38□□□□□ -0.11
SREBF1-210ENST00000471445 A0A1W2PRE2 83 aa14.37□□□□□ -0.11
SREBF1-210ENST00000471445 ZNF80P51504 273 aaPredicted RBP14.37□□□□□ -0.11
SREBF1-210ENST00000471445 FLI1Q01543 452 aaPredicted RBP14.37□□□□□ -0.11
SREBF1-210ENST00000471445 FBLL1A6NHQ2 334 aaKnown RBP14.35□□□□□ -0.11
SREBF1-210ENST00000471445 K7EQD1 137 aa14.35□□□□□ -0.11
SREBF1-210ENST00000471445 SIVA1O15304 175 aa14.35□□□□□ -0.11
SREBF1-210ENST00000471445 ARPC5O15511 151 aa14.35□□□□□ -0.11
SREBF1-210ENST00000471445 NXPH4O95158 308 aa14.35□□□□□ -0.11
SREBF1-210ENST00000471445 NEGR1Q7Z3B1 354 aa14.35□□□□□ -0.11
SREBF1-210ENST00000471445 C11orf21Q9P2W6 132 aa14.35□□□□□ -0.11
SREBF1-210ENST00000471445 LRP1BQ9NZR2 4599 aa14.35□□□□□ -0.11
SREBF1-210ENST00000471445 TAAR5O14804 337 aa14.34□□□□□ -0.11
SREBF1-210ENST00000471445 GCGP01275 180 aa14.34□□□□□ -0.11
SREBF1-210ENST00000471445 PFN1P07737 140 aaKnown RBP14.34□□□□□ -0.11
SREBF1-210ENST00000471445 LYPD5Q6UWN5 251 aa14.34□□□□□ -0.11
SREBF1-210ENST00000471445 PRNTQ86SH4 94 aa14.34□□□□□ -0.11
SREBF1-210ENST00000471445 CYTL1Q9NRR1 136 aa14.34□□□□□ -0.11
SREBF1-210ENST00000471445 ORM1P02763 201 aa14.33□□□□□ -0.12
SREBF1-210ENST00000471445 GYPEP15421 78 aa14.33□□□□□ -0.12
SREBF1-210ENST00000471445 SRIP30626 198 aa14.33□□□□□ -0.12
SREBF1-210ENST00000471445 LINC00315P59091 139 aa14.33□□□□□ -0.12
SREBF1-210ENST00000471445 ZFP69Q49AA0 526 aa14.33□□□□□ -0.12
SREBF1-210ENST00000471445 SMUG1Q53HV7 270 aa14.33□□□□□ -0.12
SREBF1-210ENST00000471445 AKR1C8PQ5T2L2 129 aa14.33□□□□□ -0.12
SREBF1-210ENST00000471445 OR4C5Q8NGB2 326 aa14.33□□□□□ -0.12
SREBF1-210ENST00000471445 PCNPQ8WW12 178 aaKnown RBP14.33□□□□□ -0.12
SREBF1-210ENST00000471445 C9orf85Q96MD7 179 aa14.32□□□□□ -0.12
SREBF1-210ENST00000471445 C16orf90A8MZG2 172 aa14.31□□□□□ -0.12
SREBF1-210ENST00000471445 C9JCJ5 164 aa14.31□□□□□ -0.12
SREBF1-210ENST00000471445 SAPCD1Q5SSQ6 148 aa14.31□□□□□ -0.12
SREBF1-210ENST00000471445 FAM74A7A6NL05 159 aa14.3□□□□□ -0.12
SREBF1-210ENST00000471445 FGF8P55075 233 aaPredicted RBP14.3□□□□□ -0.12
SREBF1-210ENST00000471445 UBE2G2P60604 165 aa14.3□□□□□ -0.12
SREBF1-210ENST00000471445 Q6ZRN7 208 aaPredicted RBP14.3□□□□□ -0.12
SREBF1-210ENST00000471445 ARL2-SNX15V9GYD0 113 aa14.3□□□□□ -0.12
SREBF1-210ENST00000471445 MAP1LC3B2A6NCE7 125 aa14.29□□□□□ -0.12
SREBF1-210ENST00000471445 SMLR1H3BR10 107 aa14.29□□□□□ -0.12
SREBF1-210ENST00000471445 PEX7O00628 323 aa14.29□□□□□ -0.12
SREBF1-210ENST00000471445 GATA1P15976 413 aaPredicted RBP14.29□□□□□ -0.12
SREBF1-210ENST00000471445 ZNF345Q14585 488 aa14.29□□□□□ -0.12
SREBF1-210ENST00000471445 Q86TA4 180 aa14.29□□□□□ -0.12
SREBF1-210ENST00000471445 LINC00479Q96M42 142 aa14.29□□□□□ -0.12
SREBF1-210ENST00000471445 TXNDC17Q9BRA2 123 aa14.29□□□□□ -0.12
SREBF1-210ENST00000471445 MAP1LC3BQ9GZQ8 125 aa14.29□□□□□ -0.12
SREBF1-210ENST00000471445 DNAH5Q8TE73 4624 aa14.29□□□□□ -0.12
SREBF1-210ENST00000471445 TRAV34A0A0B4J273 112 aa14.28□□□□□ -0.12
SREBF1-210ENST00000471445 IFNA7P01567 189 aa14.28□□□□□ -0.12
SREBF1-210ENST00000471445 RNASE3P12724 160 aaKnown RBP14.28□□□□□ -0.12
SREBF1-210ENST00000471445 ZNF876PQ49A33 203 aa14.28□□□□□ -0.12
SREBF1-210ENST00000471445 PTH2Q96A98 100 aa14.28□□□□□ -0.12
SREBF1-210ENST00000471445 NKX6-2Q9C056 277 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-210ENST00000471445 HSPG2P98160 4391 aa14.27□□□□□ -0.12
SREBF1-210ENST00000471445 LOC100131303A0A0U1RQF7 123 aa14.27□□□□□ -0.13
SREBF1-210ENST00000471445 RS1O15537 224 aa14.27□□□□□ -0.13
SREBF1-210ENST00000471445 PPT1P50897 306 aa14.27□□□□□ -0.13
SREBF1-210ENST00000471445 DPPA3Q6W0C5 159 aa14.27□□□□□ -0.13
SREBF1-210ENST00000471445 WFDC10BQ8IUB3 73 aa14.27□□□□□ -0.13
SREBF1-210ENST00000471445 HIST1H2BAQ96A08 127 aa14.27□□□□□ -0.13
SREBF1-210ENST00000471445 IGKV3D-20A0A0C4DH25 116 aa14.26□□□□□ -0.13
SREBF1-210ENST00000471445 CIDEAO60543 219 aa14.26□□□□□ -0.13
SREBF1-210ENST00000471445 ZNF506Q5JVG8 444 aa14.26□□□□□ -0.13
SREBF1-210ENST00000471445 CFAP126Q5VTH2 177 aa14.26□□□□□ -0.13
SREBF1-210ENST00000471445 SPATA12Q7Z6I5 190 aa14.26□□□□□ -0.13
SREBF1-210ENST00000471445 KCNRGQ8N5I3 272 aa14.26□□□□□ -0.13
SREBF1-210ENST00000471445 LY96Q9Y6Y9 160 aa14.25□□□□□ -0.13
SREBF1-210ENST00000471445 PGPEP1LA6NFU8 196 aa14.24□□□□□ -0.13
SREBF1-210ENST00000471445 TIRAPP58753 221 aa14.24□□□□□ -0.13
SREBF1-210ENST00000471445 SH2D6Q7Z4S9 175 aa14.24□□□□□ -0.13
SREBF1-210ENST00000471445 DNAH10OSP0CZ25 163 aa14.23□□□□□ -0.13
SREBF1-210ENST00000471445 FHITP49789 147 aa14.23□□□□□ -0.13
SREBF1-210ENST00000471445 RHOHQ15669 191 aa14.23□□□□□ -0.13
SREBF1-210ENST00000471445 COX8CQ7Z4L0 72 aa14.23□□□□□ -0.13
SREBF1-210ENST00000471445 SLC25A29Q8N8R3 303 aa14.23□□□□□ -0.13
SREBF1-210ENST00000471445 OR11H4Q8NGC9 324 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms