RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 RD3LP0DJH9 198 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 RAB4AP20338 218 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 S100A7P31151 101 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 RAB14P61106 215 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 IFITM2Q01629 132 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 ZNF616Q08AN1 781 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 DAZ2Q13117 558 aaKnown RBP3.27□□□□□ -1.89
CCDC39-202ENST00000471307 Q56UQ5 140 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 COA6Q5JTJ3 125 aaKnown RBP3.27□□□□□ -1.89
CCDC39-202ENST00000471307 AKR1C8PQ5T2L2 129 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 ALKAL2Q6UX46 152 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 CLEC19AQ6UXS0 136 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 DPPA3Q6W0C5 159 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 CYP2G1PQ6ZSU1 146 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 LINC00336Q6ZUF6 198 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 S100A7AQ86SG5 101 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 OR4X2Q8NGF9 303 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 Q8WTZ3 238 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 MGST2Q99735 147 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 GGTLC1Q9BX51 225 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 SAV1Q9H4B6 383 aaPredicted RBP3.27□□□□□ -1.89
CCDC39-202ENST00000471307 DAZ3Q9NR90 486 aaKnown RBP3.27□□□□□ -1.89
CCDC39-202ENST00000471307 MRPL36Q9P0J6 103 aaKnown RBP3.27□□□□□ -1.89
CCDC39-202ENST00000471307 ATRQ13535 2644 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 OR2T8A6NH00 312 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 I3L521 148 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 TGOLN2O43493 480 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 GGCTO75223 188 aaKnown RBP3.26□□□□□ -1.89
CCDC39-202ENST00000471307 HYPMO75409 117 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 GCGP01275 180 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 LGALS1P09382 135 aaKnown RBP3.26□□□□□ -1.89
CCDC39-202ENST00000471307 M6PRP20645 277 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 SULT1A2P50226 295 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 B2MP61769 119 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 RUNX1Q01196 453 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 ZNF90Q03938 601 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 ACOT6Q3I5F7 207 aaPredicted RBP3.26□□□□□ -1.89
CCDC39-202ENST00000471307 MIC13Q5XKP0 118 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 C10orf99Q6UWK7 81 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 C12orf54Q6X4T0 127 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 SSX7Q7RTT5 188 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 GPHB5Q86YW7 130 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 C6orf223Q8N319 242 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 OR51G1Q8NGK1 321 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 OR10G4Q8NGN3 311 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 OR10G9Q8NGN4 311 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 C4orf3Q8WVX3 66 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 TMEM101Q96IK0 257 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 PFDN5Q99471 154 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 RSG1Q9BU20 258 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 SCRT1Q9BWW7 348 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 SH3BGRL3Q9H299 93 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 RPRMQ9NS64 109 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 SLC39A9Q9NUM3 307 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 XCL2Q9UBD3 114 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 TSSC4Q9Y5U2 329 aaPredicted RBP3.26□□□□□ -1.89
CCDC39-202ENST00000471307 PXMP4Q9Y6I8 212 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 S4R3C0 116 aa3.26□□□□□ -1.89
CCDC39-202ENST00000471307 TRAV1-1A0A0B4J248 108 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 K7EMT4 169 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 NDUFA4O00483 81 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 COX7A2P2O60397 106 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 YIF1AO95070 293 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 IGHV3-11P01762 117 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 OR5G3P0C626 314 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 CD28P10747 220 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 NPPCP23582 126 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 RAB2AP61019 212 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 RHOBP62745 196 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 DEFA5Q01523 94 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 TAL2Q16559 108 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 C5orf47Q569G3 176 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 C10orf113Q5VZT2 155 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 TOMM20LQ6UXN7 152 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 RPP25LQ8N5L8 163 aaKnown RBP3.25□□□□□ -1.89
CCDC39-202ENST00000471307 NKAPP1Q8N9T2 125 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 C7orf33Q8WU49 177 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 MBD3L1Q8WWY6 194 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 MRPL27Q9P0M9 148 aaKnown RBP3.25□□□□□ -1.89
CCDC39-202ENST00000471307 PUS1Q9Y606 427 aaKnown RBP eCLIP3.25□□□□□ -1.89
CCDC39-202ENST00000471307 RFNGQ9Y644 331 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 URGCP-MRPS24S4R325 110 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 CUBNO60494 3623 aa3.25□□□□□ -1.89
CCDC39-202ENST00000471307 WNK1Q9H4A3 2382 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 IGKV2D-24A0A075B6R9 120 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 CTXND1A0A1B0GTU2 59 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 PPP5D1E7EU14 171 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 LINC01619G3V211 115 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 LGALS9O00182 355 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 TRBV12-3P01733 135 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 IL4P05112 153 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 C8orf88P0DMB2 117 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 ORM2P19652 201 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 CRYBB3P26998 211 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 CDC34P49427 236 aaPredicted RBP3.24□□□□□ -1.89
CCDC39-202ENST00000471307 TAS2R45P59539 299 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 PAFAH1B2P68402 229 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 ZNF726P1Q15940 193 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 GCSAMLQ5JQS6 135 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms