RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 IGLL5B9A064 214 aa9.72□□□□□ -0.85
HMGN1-211ENST00000471260 PLP1P60201 277 aa9.72□□□□□ -0.85
HMGN1-211ENST00000471260 PSG9Q00887 426 aa9.72□□□□□ -0.85
HMGN1-211ENST00000471260 OR10J3Q5JRS4 329 aa9.72□□□□□ -0.85
HMGN1-211ENST00000471260 CMTM2Q8TAZ6 248 aa9.72□□□□□ -0.85
HMGN1-211ENST00000471260 SLC25A2Q9BXI2 301 aa9.72□□□□□ -0.85
HMGN1-211ENST00000471260 MRPL18Q9H0U6 180 aaKnown RBP9.72□□□□□ -0.85
HMGN1-211ENST00000471260 APLNQ9ULZ1 77 aa9.72□□□□□ -0.85
HMGN1-211ENST00000471260 A0A0J9YX75 114 aa9.71□□□□□ -0.86
HMGN1-211ENST00000471260 TEX48A0A1B0GUV7 120 aa9.71□□□□□ -0.86
HMGN1-211ENST00000471260 SMIM27A0A1W2PRY6 76 aa9.71□□□□□ -0.86
HMGN1-211ENST00000471260 PGPEP1LA6NFU8 196 aa9.71□□□□□ -0.86
HMGN1-211ENST00000471260 CRISP2P16562 243 aa9.71□□□□□ -0.86
HMGN1-211ENST00000471260 RPL7P18124 248 aaKnown RBP9.71□□□□□ -0.86
HMGN1-211ENST00000471260 GATA2P23769 480 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-211ENST00000471260 RAB4BP61018 213 aa9.71□□□□□ -0.86
HMGN1-211ENST00000471260 CDPF1Q6NVV7 123 aa9.71□□□□□ -0.86
HMGN1-211ENST00000471260 Q6ZTC4 211 aa9.71□□□□□ -0.86
HMGN1-211ENST00000471260 OR4B1Q8NGF8 309 aa9.71□□□□□ -0.86
HMGN1-211ENST00000471260 NDUFAF3Q9BU61 184 aa9.71□□□□□ -0.86
HMGN1-211ENST00000471260 PAXXQ9BUH6 204 aa9.71□□□□□ -0.86
HMGN1-211ENST00000471260 SLC25A39Q9BZJ4 359 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-211ENST00000471260 BIRC6Q9NR09 4857 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 A8MTW9 85 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 H3BRN7 92 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 PEX7O00628 323 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 HYPMO75409 117 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 IGKV3-20P01619 116 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 SPART-AS1P0CW21 52 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 C12orf74Q32Q52 190 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 CT83Q5H943 113 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 IBA57Q5T440 356 aaKnown RBP9.7□□□□□ -0.86
HMGN1-211ENST00000471260 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 SHANK2-AS3Q9BTD1 123 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 HIGD1AQ9Y241 93 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 GOLT1BQ9Y3E0 138 aa9.7□□□□□ -0.86
HMGN1-211ENST00000471260 SNURFLB1AK76 121 aa9.69□□□□□ -0.86
HMGN1-211ENST00000471260 DUSP14O95147 198 aaKnown RBP9.69□□□□□ -0.86
HMGN1-211ENST00000471260 IGLV2-8P01709 118 aa9.69□□□□□ -0.86
HMGN1-211ENST00000471260 DEFB1P60022 68 aa9.69□□□□□ -0.86
HMGN1-211ENST00000471260 ATP5L2Q7Z4Y8 100 aa9.69□□□□□ -0.86
HMGN1-211ENST00000471260 C14orf144Q96I85 54 aa9.69□□□□□ -0.86
HMGN1-211ENST00000471260 C17orf77Q96MU5 243 aa9.69□□□□□ -0.86
HMGN1-211ENST00000471260 CELA1Q9UNI1 258 aa9.69□□□□□ -0.86
HMGN1-211ENST00000471260 IGHV4-4A0A075B6R2 117 aa9.68□□□□□ -0.86
HMGN1-211ENST00000471260 DEFB131BA0A096LNP1 70 aa9.68□□□□□ -0.86
HMGN1-211ENST00000471260 HIST1H1EP10412 219 aaKnown RBP9.68□□□□□ -0.86
HMGN1-211ENST00000471260 FXYD7P58549 80 aa9.68□□□□□ -0.86
HMGN1-211ENST00000471260 SUMO1P63165 101 aaKnown RBP9.68□□□□□ -0.86
HMGN1-211ENST00000471260 TMEM183BQ1AE95 376 aa9.68□□□□□ -0.86
HMGN1-211ENST00000471260 LINC00469Q8N7U9 141 aa9.68□□□□□ -0.86
HMGN1-211ENST00000471260 C20orf173Q96LM9 149 aa9.68□□□□□ -0.86
HMGN1-211ENST00000471260 C2orf88Q9BSF0 95 aa9.68□□□□□ -0.86
HMGN1-211ENST00000471260 NAGKQ9UJ70 344 aa9.68□□□□□ -0.86
HMGN1-211ENST00000471260 A0A087X0K7 114 aa9.67□□□□□ -0.86
HMGN1-211ENST00000471260 TRBV6-1A0A0K0K1D8 114 aa9.67□□□□□ -0.86
HMGN1-211ENST00000471260 F6UB75 175 aa9.67□□□□□ -0.86
HMGN1-211ENST00000471260 SSTP61278 116 aa9.67□□□□□ -0.86
HMGN1-211ENST00000471260 FAM162BQ5T6X4 162 aa9.67□□□□□ -0.86
HMGN1-211ENST00000471260 DMRTA1Q5VZB9 504 aa9.67□□□□□ -0.86
HMGN1-211ENST00000471260 TMEM136Q6ZRR5 245 aa9.67□□□□□ -0.86
HMGN1-211ENST00000471260 C5orf17Q8NAS9 161 aa9.67□□□□□ -0.86
HMGN1-211ENST00000471260 FXYD5Q96DB9 178 aa9.67□□□□□ -0.86
HMGN1-211ENST00000471260 TMEM14CQ9P0S9 112 aa9.67□□□□□ -0.86
HMGN1-211ENST00000471260 ZNF492Q9P255 531 aa9.67□□□□□ -0.86
HMGN1-211ENST00000471260 KLF12Q9Y4X4 402 aa9.67□□□□□ -0.86
HMGN1-211ENST00000471260 IGHV3OR16-12A0A075B7B8 117 aa9.66□□□□□ -0.86
HMGN1-211ENST00000471260 SLC17A3O00476 420 aa9.66□□□□□ -0.86
HMGN1-211ENST00000471260 RRN3P1Q2M238 152 aa9.66□□□□□ -0.86
HMGN1-211ENST00000471260 AMTNQ6UX39 209 aa9.66□□□□□ -0.86
HMGN1-211ENST00000471260 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
HMGN1-211ENST00000471260 C1orf158Q8N1D5 194 aa9.66□□□□□ -0.86
HMGN1-211ENST00000471260 ZNF664Q8N3J9 261 aa9.66□□□□□ -0.86
HMGN1-211ENST00000471260 FMC1Q96HJ9 113 aa9.66□□□□□ -0.86
HMGN1-211ENST00000471260 KCNS1Q96KK3 526 aa9.66□□□□□ -0.86
HMGN1-211ENST00000471260 ATG101Q9BSB4 218 aa9.66□□□□□ -0.86
HMGN1-211ENST00000471260 ZNF586Q9NXT0 402 aa9.66□□□□□ -0.86
HMGN1-211ENST00000471260 TRAV8-2A0A0B4J237 113 aa9.65□□□□□ -0.86
HMGN1-211ENST00000471260 ZNF705GA8MUZ8 300 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-211ENST00000471260 UBE2G1P62253 170 aa9.65□□□□□ -0.86
HMGN1-211ENST00000471260 PATE2Q6UY27 113 aa9.65□□□□□ -0.86
HMGN1-211ENST00000471260 LINC00305Q7Z4B0 112 aa9.65□□□□□ -0.86
HMGN1-211ENST00000471260 BAGE3Q86Y29 109 aa9.65□□□□□ -0.86
HMGN1-211ENST00000471260 BAGE2Q86Y30 109 aa9.65□□□□□ -0.86
HMGN1-211ENST00000471260 C20orf144Q9BQM9 153 aa9.65□□□□□ -0.86
HMGN1-211ENST00000471260 ZNF331Q9NQX6 463 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-211ENST00000471260 DKK2Q9UBU2 259 aa9.65□□□□□ -0.86
HMGN1-211ENST00000471260 NAT8BQ9UHF3 227 aa9.65□□□□□ -0.86
HMGN1-211ENST00000471260 FAM231BA6NCW3 169 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 SERF1AO75920 110 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 P0DMU3 169 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 FAM231AP0DMU4 169 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 FAM231CP0DMU5 169 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 MGST1P10620 155 aaKnown RBP9.64□□□□□ -0.87
HMGN1-211ENST00000471260 RAB4AP20338 218 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 EMP1P54849 157 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 OR5I1Q13606 314 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 TMEM256Q8N2U0 113 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 ZNF738Q8NE65 137 aa9.64□□□□□ -0.87
HMGN1-211ENST00000471260 TSKUQ8WUA8 353 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms