RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 M0R378 163 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 DEFB4AO15263 64 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 SLC16A4O15374 487 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 LYZL6O75951 148 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 DNAL4O96015 105 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 TNFP01375 233 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 IFNA7P01567 189 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 UQCRHP07919 91 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 PET100P0DJ07 73 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 OGNP20774 298 aaKnown RBP-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 MAP3K7CLP57077 242 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 RPL37P61927 97 aaKnown RBP-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 CAV1Q03135 178 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 PPP1R1AQ13522 171 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 GUK1Q16774 197 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 IMPG1Q17R60 797 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 KLK9Q2XQG4 91 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 DEFB135Q30KP9 77 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 KRTAP19-5Q3LI72 72 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 CDKL4Q5MAI5 379 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 AADACL3Q5VUY0 350 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 KRTAP26-1Q6PEX3 210 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 HRCT1Q6UXD1 115 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 ALKAL1Q6UXT8 129 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 ATP11AUNQ6ZP68 121 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 TMED4Q7Z7H5 227 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 BPIFA4PQ86YQ2 179 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 PRR15Q8IV56 129 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 EXOC3-AS1Q8N2X6 119 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 Q8N402 240 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 TMEM156Q8N614 296 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 DEFB125Q8N687 156 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 TMEM161BQ8NDZ6 487 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 GPR32P1Q8NGA4 272 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 OR4E2Q8NGC2 313 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 OR8D4Q8NGM9 314 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 OR10K1Q8NGX5 313 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 CANT1Q8WVQ1 401 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 SCGB3A1Q96QR1 104 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 GINS4Q9BRT9 223 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 DERL1Q9BUN8 251 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 SPANXB1Q9NS25 103 aaPredicted RBP-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 FBXL12Q9NXK8 326 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 CHMP5Q9NZZ3 219 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 STOML2Q9UJZ1 356 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 MYH10P35580 1976 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 A0A0J9YY10 115 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 A0A1B0GX78 115 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 TMEM213A2RRL7 107 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 DPRXA6NFQ7 191 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 ZNF879B4DU55 563 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 BIRC5O15392 142 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 SULT1B1O43704 296 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 HPGDSO60760 199 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 IGLV3-1P01715 115 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 SPART-AS1P0CW21 52 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 C8orf88P0DMB2 117 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 SMIM10L2AP0DMW4 78 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 SMIM10L2BP0DMW5 78 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 MGST1P10620 155 aaKnown RBP-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 EVI2AP22794 236 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 CDC34P49427 236 aaPredicted RBP-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 DEFB1P60022 68 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 IFITM2Q01629 132 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 RHEBQ15382 184 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 DEFB136Q30KP8 78 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 Q5BKY6 102 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 C8orf74Q6P047 294 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 IZUMO2Q6UXV1 221 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 SLC51BQ86UW2 128 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 SLC30A7Q8NEW0 376 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 OR5A1Q8NGJ0 315 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 C4orf3Q8WVX3 66 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 C10orf82Q8WW14 230 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 MUCL1Q96DR8 90 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 SMIM19Q96E16 107 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 ZC2HC1AQ96GY0 325 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 CNBD2Q96M20 576 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 FAM103A1Q9BTL3 118 aaKnown RBP-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 C6orf62Q9GZU0 229 aaPredicted RBP-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 OR52A5Q9H2C5 316 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 MIXL1Q9H2W2 232 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 OR51I2Q9H344 312 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 FAM96AQ9H5X1 160 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 TMEM14CQ9P0S9 112 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 C15orf41Q9Y2V0 281 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 CCDC171Q6TFL3 1326 aa-0.21□□□□□ -2.44
UBXN4-207ENST00000471246 LOC107986453A0A1B0GWG9 222 aa-0.22□□□□□ -2.44
UBXN4-207ENST00000471246 TMEM189A5PLL7 270 aa-0.22□□□□□ -2.44
UBXN4-207ENST00000471246 INMT-MINDY4F8WBC2 141 aa-0.22□□□□□ -2.44
UBXN4-207ENST00000471246 BUB1B-PAK6H3BSN5 160 aa-0.22□□□□□ -2.44
UBXN4-207ENST00000471246 H3BUX3 64 aa-0.22□□□□□ -2.44
UBXN4-207ENST00000471246 FAAHO00519 579 aa-0.22□□□□□ -2.44
UBXN4-207ENST00000471246 ACOX3O15254 700 aa-0.22□□□□□ -2.44
UBXN4-207ENST00000471246 TCL1BO95988 128 aa-0.22□□□□□ -2.44
UBXN4-207ENST00000471246 SPINK1P00995 79 aa-0.22□□□□□ -2.44
UBXN4-207ENST00000471246 TPM1P09493 284 aa-0.22□□□□□ -2.44
UBXN4-207ENST00000471246 COX6A1P12074 109 aa-0.22□□□□□ -2.44
UBXN4-207ENST00000471246 KDELR1P24390 212 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms