RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CARHSP1Q9Y2V2 147 aaKnown RBP6.52□□□□□ -1.37
SF3A1-206ENST00000471037 DNAH17Q9UFH2 4485 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 DYNC1H1Q14204 4646 aaKnown RBP6.51□□□□□ -1.37
SF3A1-206ENST00000471037 LEPP41159 167 aa6.51□□□□□ -1.37
SF3A1-206ENST00000471037 CSNK1G2-AS1Q8NCQ2 148 aa6.51□□□□□ -1.37
SF3A1-206ENST00000471037 TVP23CQ96ET8 276 aa6.51□□□□□ -1.37
SF3A1-206ENST00000471037 FAM19A4Q96LR4 140 aa6.51□□□□□ -1.37
SF3A1-206ENST00000471037 MLST8Q9BVC4 326 aa6.51□□□□□ -1.37
SF3A1-206ENST00000471037 SDF2L1Q9HCN8 221 aa6.51□□□□□ -1.37
SF3A1-206ENST00000471037 RYR1P21817 5038 aa6.51□□□□□ -1.37
SF3A1-206ENST00000471037 RTL8CO15255 209 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 ATP6V1G1O75348 118 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 IGKV3-20P01619 116 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 IGLV2-8P01709 118 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 P0DMU3 169 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 FAM231AP0DMU4 169 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 FAM231CP0DMU5 169 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 CDKN1BP46527 198 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 NUTF2P61970 127 aaKnown RBP6.5□□□□□ -1.37
SF3A1-206ENST00000471037 RPL23P62829 140 aaKnown RBP6.5□□□□□ -1.37
SF3A1-206ENST00000471037 SMUG1Q53HV7 270 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 AMTNQ6UX39 209 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 LINC01551Q86U37 167 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 ZFAND2AQ8N6M9 145 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 POM121L12Q8N7R1 296 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 OCC1Q8TAD7 63 aa6.5□□□□□ -1.37
SF3A1-206ENST00000471037 PGPEP1LA6NFU8 196 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 PRSS29PA6NIE9 313 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 KLLNB2CW77 178 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 GCGP01275 180 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 APOC3P02656 99 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 MGST1P10620 155 aaKnown RBP6.49□□□□□ -1.37
SF3A1-206ENST00000471037 S100A1P23297 94 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 ADIRFQ15847 76 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 C12orf74Q32Q52 190 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 C4orf48Q5BLP8 95 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 SVBPQ8N300 66 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 NHLRC2Q8NBF2 726 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 ZC2HC1AQ96GY0 325 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 C8orf49Q96NF6 230 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 CELA1Q9UNI1 258 aa6.49□□□□□ -1.37
SF3A1-206ENST00000471037 DEFB131BA0A096LNP1 70 aa6.48□□□□□ -1.37
SF3A1-206ENST00000471037 B4DEV8 164 aa6.48□□□□□ -1.37
SF3A1-206ENST00000471037 K7EN84 100 aa6.48□□□□□ -1.37
SF3A1-206ENST00000471037 GPX1P07203 203 aa6.48□□□□□ -1.37
SF3A1-206ENST00000471037 SPINK13Q1W4C9 94 aa6.48□□□□□ -1.37
SF3A1-206ENST00000471037 LGALS9BQ3B8N2 356 aa6.48□□□□□ -1.37
SF3A1-206ENST00000471037 FAM162BQ5T6X4 162 aa6.48□□□□□ -1.37
SF3A1-206ENST00000471037 Q6AWC8 147 aa6.48□□□□□ -1.37
SF3A1-206ENST00000471037 ISOC2Q96AB3 205 aa6.48□□□□□ -1.37
SF3A1-206ENST00000471037 NDUFAF3Q9BU61 184 aa6.48□□□□□ -1.37
SF3A1-206ENST00000471037 C1QTNF4Q9BXJ3 329 aa6.48□□□□□ -1.37
SF3A1-206ENST00000471037 PKD1P98161 4303 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 TRAV21A0A0B4J279 112 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 C7orf71A4D174 169 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 FABP5P3A8MUU1 101 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 M0R036 132 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 M0R2Z0 102 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 SH2D1AO60880 128 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 SNAPINO95295 136 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 INSP01308 110 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 PFN1P07737 140 aaKnown RBP6.47□□□□□ -1.37
SF3A1-206ENST00000471037 RHEBQ15382 184 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 GFI1BQ5VTD9 330 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 PRR27Q6MZM9 219 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 FAM231DQ6ZW35 169 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 CLRN3Q8NCR9 226 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 DAZAP1Q96EP5 407 aaKnown RBP6.47□□□□□ -1.37
SF3A1-206ENST00000471037 C20orf144Q9BQM9 153 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 OSTCQ9NRP0 149 aa6.47□□□□□ -1.37
SF3A1-206ENST00000471037 C19orf71A6NCJ1 209 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 J3KRW8 73 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 PPP1R2P9O14990 202 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 MT-ND4LP03901 98 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 RNASE4P34096 147 aaKnown RBP6.46□□□□□ -1.38
SF3A1-206ENST00000471037 CRIP1P50238 77 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 ZNF80P51504 273 aaPredicted RBP6.46□□□□□ -1.38
SF3A1-206ENST00000471037 FXYD7P58549 80 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 ERVFC1-1P60608 527 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 BTN1A1Q13410 526 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 OR5I1Q13606 314 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 IBA57Q5T440 356 aaKnown RBP6.46□□□□□ -1.38
SF3A1-206ENST00000471037 PRR9Q5T870 116 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 Q6ZR54 194 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 C15orf54Q8N8G6 183 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 ANAPC16Q96DE5 110 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 SFRP2Q96HF1 295 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 NEU1Q99519 415 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 ABCA13Q86UQ4 5058 aa6.46□□□□□ -1.38
SF3A1-206ENST00000471037 TRAV12-2A0A075B6T6 113 aa6.45□□□□□ -1.38
SF3A1-206ENST00000471037 A0A087WWC5 75 aa6.45□□□□□ -1.38
SF3A1-206ENST00000471037 CRXO43186 299 aaPredicted RBP6.45□□□□□ -1.38
SF3A1-206ENST00000471037 ZNF324O75467 553 aaPredicted RBP6.45□□□□□ -1.38
SF3A1-206ENST00000471037 P01737 135 aa6.45□□□□□ -1.38
SF3A1-206ENST00000471037 KIR3DS1Q14943 382 aa6.45□□□□□ -1.38
SF3A1-206ENST00000471037 CT83Q5H943 113 aa6.45□□□□□ -1.38
SF3A1-206ENST00000471037 ZNF705AQ6ZN79 300 aaPredicted RBP6.45□□□□□ -1.38
SF3A1-206ENST00000471037 TMEM256Q8N2U0 113 aa6.45□□□□□ -1.38
SF3A1-206ENST00000471037 NUDT10Q8NFP7 164 aa6.45□□□□□ -1.38
SF3A1-206ENST00000471037 OR10G8Q8NGN5 311 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms