RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 EXOC3-AS1Q8N2X6 119 aa5.86□□□□□ -1.47
XRN1-208ENST00000470537 Q8N976 141 aa5.86□□□□□ -1.47
XRN1-208ENST00000470537 CHAC1Q9BUX1 264 aa5.86□□□□□ -1.47
XRN1-208ENST00000470537 IGKV2-40A0A087WW87 121 aaPredicted RBP5.85□□□□□ -1.47
XRN1-208ENST00000470537 GGTLC3B5MD39 225 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 NDUFB4O95168 129 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 IGKV2D-40P01614 121 aaPredicted RBP5.85□□□□□ -1.47
XRN1-208ENST00000470537 NBEAP1P0C6P0 100 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 S100A5P33763 92 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 CAV2P51636 162 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 TMBIM6P55061 237 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 SPCS2Q15005 226 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 RHOHQ15669 191 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 TMEM183BQ1AE95 376 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 CNPY1Q3B7I2 92 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 MUC21Q5SSG8 566 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 SCXQ7RTU7 201 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 TMEM183AQ8IXX5 376 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 ATP6V0E2Q8NHE4 81 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 WDR83OSQ9Y284 106 aa5.85□□□□□ -1.47
XRN1-208ENST00000470537 TRBV6-4A0A1B0GX49 114 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 FBLL1A6NHQ2 334 aaKnown RBP5.84□□□□□ -1.47
XRN1-208ENST00000470537 CENPXA8MT69 81 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 IGLV2-8P01709 118 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 IGHV3-30P01768 117 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 IGHV3-33P01772 117 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 IGHV3-30-3P0DP02 117 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 IGHV3-30-5P0DP03 117 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 GATA1P15976 413 aaPredicted RBP5.84□□□□□ -1.47
XRN1-208ENST00000470537 BAXQ07812 192 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 ARL16Q0P5N6 197 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 ATP6V1FQ16864 119 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 RNF151Q2KHN1 245 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 VWC2Q2TAL6 325 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 Q6AWC8 147 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 STX12Q86Y82 276 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 TRIM63Q969Q1 353 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 KCNS1Q96KK3 526 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 GTSF1LQ9H1H1 148 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 URGCP-MRPS24S4R325 110 aa5.84□□□□□ -1.47
XRN1-208ENST00000470537 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.83□□□□□ -1.48
XRN1-208ENST00000470537 A0A087WWC5 75 aa5.83□□□□□ -1.48
XRN1-208ENST00000470537 TRAV8-1A0A0A6YYK1 113 aa5.83□□□□□ -1.48
XRN1-208ENST00000470537 CST7O76096 145 aa5.83□□□□□ -1.48
XRN1-208ENST00000470537 NDUFB6O95139 128 aa5.83□□□□□ -1.48
XRN1-208ENST00000470537 MBPP02686 304 aaPredicted RBP5.83□□□□□ -1.48
XRN1-208ENST00000470537 PYYP10082 97 aa5.83□□□□□ -1.48
XRN1-208ENST00000470537 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
XRN1-208ENST00000470537 PRR9Q5T870 116 aa5.83□□□□□ -1.48
XRN1-208ENST00000470537 TMED6Q8WW62 240 aa5.83□□□□□ -1.48
XRN1-208ENST00000470537 MRPS26Q9BYN8 205 aaKnown RBP5.83□□□□□ -1.48
XRN1-208ENST00000470537 SLIRPQ9GZT3 109 aaKnown RBP5.83□□□□□ -1.48
XRN1-208ENST00000470537 OR51M1Q9H341 326 aa5.83□□□□□ -1.48
XRN1-208ENST00000470537 KCNIP2Q9NS61 270 aa5.83□□□□□ -1.48
XRN1-208ENST00000470537 TRAV21A0A0B4J279 112 aa5.82□□□□□ -1.48
XRN1-208ENST00000470537 IGLV2-11P01706 119 aa5.82□□□□□ -1.48
XRN1-208ENST00000470537 MGST1P10620 155 aaKnown RBP5.82□□□□□ -1.48
XRN1-208ENST00000470537 FGF7P21781 194 aa5.82□□□□□ -1.48
XRN1-208ENST00000470537 SULT1A1P50225 295 aa5.82□□□□□ -1.48
XRN1-208ENST00000470537 C14orf177Q52M58 125 aa5.82□□□□□ -1.48
XRN1-208ENST00000470537 FAM74A1Q5RGS3 127 aa5.82□□□□□ -1.48
XRN1-208ENST00000470537 SLC25A29Q8N8R3 303 aa5.82□□□□□ -1.48
XRN1-208ENST00000470537 MITD1Q8WV92 249 aa5.82□□□□□ -1.48
XRN1-208ENST00000470537 SDF2L1Q9HCN8 221 aa5.82□□□□□ -1.48
XRN1-208ENST00000470537 NAGKQ9UJ70 344 aa5.82□□□□□ -1.48
XRN1-208ENST00000470537 HMCN2Q8NDA2 5059 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 IGHV3-16A0A0C4DH30 117 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 LOC100131303A0A0U1RQF7 123 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 UBE2L5PA0A1B0GUS4 154 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 OR10J4P0C629 311 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 RANP62826 216 aaKnown RBP5.81□□□□□ -1.48
XRN1-208ENST00000470537 ELOBQ15370 118 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 ZNF876PQ49A33 203 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 SPANXN2Q5MJ10 180 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 KCNIP4Q6PIL6 250 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 CLRN3Q8NCR9 226 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 OR10G9Q8NGN4 311 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 Q8TAT8 98 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 CMTM2Q8TAZ6 248 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 CIRBP-AS1Q8TBR5 109 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 C2orf50Q96LR7 162 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 PAXXQ9BUH6 204 aa5.81□□□□□ -1.48
XRN1-208ENST00000470537 LSM5Q9Y4Y9 91 aaKnown RBP5.81□□□□□ -1.48
XRN1-208ENST00000470537 RNF222A6NCQ9 220 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 C5orf51A6NDU8 294 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 FAM25EA8MYX2 175 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 DIRC3C9JPN6 131 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 LECT2O14960 151 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 SMIM18P0DKX4 95 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 RPL37AP61513 92 aaKnown RBP5.8□□□□□ -1.48
XRN1-208ENST00000470537 TRIQKQ629K1 86 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 Q6ZQT7 251 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 HSD17B11Q8NBQ5 300 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 ASB13Q8WXK3 278 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 BAALCQ8WXS3 180 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 SLC25A2Q9BXI2 301 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 NPCDR1Q9BY65 106 aa5.8□□□□□ -1.48
XRN1-208ENST00000470537 LYRM2Q9NU23 88 aaPredicted RBP5.8□□□□□ -1.48
XRN1-208ENST00000470537 FAM24AA6NFZ4 105 aa5.79□□□□□ -1.48
XRN1-208ENST00000470537 GNRH2O43555 120 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms