RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 KCNS1Q96KK3 526 aa10.67□□□□□ -0.7
CDC42SE1-203ENST00000470278 MED9Q9NWA0 146 aa10.67□□□□□ -0.7
CDC42SE1-203ENST00000470278 TIMM8BQ9Y5J9 83 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-203ENST00000470278 TRGV11A0A075B6L2 103 aa10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 CXorf65A6NEN9 183 aa10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 FABP5P3A8MUU1 101 aa10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 RAB14P61106 215 aa10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 IFITM2Q01629 132 aa10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 DAZ2Q13117 558 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 ZNF674Q2M3X9 581 aa10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 CENPWQ5EE01 88 aa10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 MUC21Q5SSG8 566 aa10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 FAM162BQ5T6X4 162 aa10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 BAGE2Q86Y30 109 aa10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 EIF5A2Q9GZV4 153 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 TP53TG3Q9ULZ0 132 aa10.66□□□□□ -0.7
CDC42SE1-203ENST00000470278 SNURFLB1AK76 121 aa10.65□□□□□ -0.7
CDC42SE1-203ENST00000470278 C9JCJ5 164 aa10.65□□□□□ -0.7
CDC42SE1-203ENST00000470278 CRIP1P50238 77 aa10.65□□□□□ -0.7
CDC42SE1-203ENST00000470278 TCL1AP56279 114 aa10.65□□□□□ -0.7
CDC42SE1-203ENST00000470278 NANOS2P60321 138 aaKnown RBP10.65□□□□□ -0.7
CDC42SE1-203ENST00000470278 ZNF415Q09FC8 603 aa10.65□□□□□ -0.7
CDC42SE1-203ENST00000470278 SMDT1Q9H4I9 107 aa10.65□□□□□ -0.7
CDC42SE1-203ENST00000470278 SDF2L1Q9HCN8 221 aa10.65□□□□□ -0.7
CDC42SE1-203ENST00000470278 C11orf21Q9P2W6 132 aa10.65□□□□□ -0.7
CDC42SE1-203ENST00000470278 NAGKQ9UJ70 344 aa10.65□□□□□ -0.7
CDC42SE1-203ENST00000470278 TRBV20OR9-2A0A075B6H5 130 aa10.64□□□□□ -0.71
CDC42SE1-203ENST00000470278 GNG4P50150 75 aa10.64□□□□□ -0.71
CDC42SE1-203ENST00000470278 C12orf74Q32Q52 190 aa10.64□□□□□ -0.71
CDC42SE1-203ENST00000470278 CLLU1Q5K131 121 aa10.64□□□□□ -0.71
CDC42SE1-203ENST00000470278 LINC00612Q8N6U2 182 aa10.64□□□□□ -0.71
CDC42SE1-203ENST00000470278 NHLRC2Q8NBF2 726 aa10.64□□□□□ -0.71
CDC42SE1-203ENST00000470278 GSN-AS1Q9NRJ2 163 aa10.64□□□□□ -0.71
CDC42SE1-203ENST00000470278 SH2D1AO60880 128 aa10.63□□□□□ -0.71
CDC42SE1-203ENST00000470278 TYMSP04818 313 aa10.63□□□□□ -0.71
CDC42SE1-203ENST00000470278 PARLQ9H300 379 aa10.63□□□□□ -0.71
CDC42SE1-203ENST00000470278 NOP10Q9NPE3 64 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-203ENST00000470278 IGKV3D-20A0A0C4DH25 116 aa10.62□□□□□ -0.71
CDC42SE1-203ENST00000470278 IGHV3-16A0A0C4DH30 117 aa10.62□□□□□ -0.71
CDC42SE1-203ENST00000470278 RAB19A4D1S5 217 aa10.62□□□□□ -0.71
CDC42SE1-203ENST00000470278 NUPR2A6NF83 97 aa10.62□□□□□ -0.71
CDC42SE1-203ENST00000470278 IGLV2-8P01709 118 aa10.62□□□□□ -0.71
CDC42SE1-203ENST00000470278 LINC01559Q495D7 138 aa10.62□□□□□ -0.71
CDC42SE1-203ENST00000470278 Q6ZTC4 211 aa10.62□□□□□ -0.71
CDC42SE1-203ENST00000470278 SPINK4O60575 86 aa10.61□□□□□ -0.71
CDC42SE1-203ENST00000470278 SRP19P09132 144 aaKnown RBP10.61□□□□□ -0.71
CDC42SE1-203ENST00000470278 DAD1P61803 113 aa10.61□□□□□ -0.71
CDC42SE1-203ENST00000470278 LGALS9BQ3B8N2 356 aa10.61□□□□□ -0.71
CDC42SE1-203ENST00000470278 C18orf15Q96N68 181 aa10.61□□□□□ -0.71
CDC42SE1-203ENST00000470278 SPXQ9BT56 116 aa10.61□□□□□ -0.71
CDC42SE1-203ENST00000470278 BIN3Q9NQY0 253 aa10.61□□□□□ -0.71
CDC42SE1-203ENST00000470278 MDFICQ9P1T7 246 aa10.61□□□□□ -0.71
CDC42SE1-203ENST00000470278 KRBOX1C9JBD0 128 aa10.6□□□□□ -0.71
CDC42SE1-203ENST00000470278 GNRH2O43555 120 aa10.6□□□□□ -0.71
CDC42SE1-203ENST00000470278 PEA15Q15121 130 aa10.6□□□□□ -0.71
CDC42SE1-203ENST00000470278 DNLZQ5SXM8 178 aa10.6□□□□□ -0.71
CDC42SE1-203ENST00000470278 PHLDA1Q8WV24 401 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-203ENST00000470278 TRAV10A0A0B4J240 114 aa10.59□□□□□ -0.71
CDC42SE1-203ENST00000470278 B4DEV8 164 aa10.59□□□□□ -0.71
CDC42SE1-203ENST00000470278 ORM1P02763 201 aa10.59□□□□□ -0.71
CDC42SE1-203ENST00000470278 CXCL1P09341 107 aa10.59□□□□□ -0.71
CDC42SE1-203ENST00000470278 CEMP1Q6PRD7 247 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE1-203ENST00000470278 C9orf85Q96MD7 179 aa10.59□□□□□ -0.71
CDC42SE1-203ENST00000470278 LY96Q9Y6Y9 160 aa10.59□□□□□ -0.71
CDC42SE1-203ENST00000470278 DNAH10Q8IVF4 4471 aa10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 C19orf71A6NCJ1 209 aa10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 PGPEP1LA6NFU8 196 aa10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 DEFB130BP0DP73 79 aa10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 DEFB130AP0DP74 79 aa10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 SRSF3P84103 164 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 PRR27Q6MZM9 219 aa10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 Q6ZTI0 123 aa10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 RASL10AQ92737 203 aa10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 SMIM7Q9BQ49 75 aa10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 NDUFAF3Q9BU61 184 aa10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 IL36BQ9NZH7 164 aa10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 KMT2AQ03164 3969 aa10.58□□□□□ -0.72
CDC42SE1-203ENST00000470278 TRGV1A0A0A0MS02 117 aa10.57□□□□□ -0.72
CDC42SE1-203ENST00000470278 C9JQL5 133 aa10.57□□□□□ -0.72
CDC42SE1-203ENST00000470278 M0R036 132 aa10.57□□□□□ -0.72
CDC42SE1-203ENST00000470278 M0R2P5 195 aa10.57□□□□□ -0.72
CDC42SE1-203ENST00000470278 MGST1P10620 155 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-203ENST00000470278 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-203ENST00000470278 ASIPP42127 132 aa10.57□□□□□ -0.72
CDC42SE1-203ENST00000470278 CEBPGP53567 150 aa10.57□□□□□ -0.72
CDC42SE1-203ENST00000470278 FAM74A3Q4VXF1 159 aa10.57□□□□□ -0.72
CDC42SE1-203ENST00000470278 ZNF575Q86XF7 245 aa10.57□□□□□ -0.72
CDC42SE1-203ENST00000470278 PTH2Q96A98 100 aa10.57□□□□□ -0.72
CDC42SE1-203ENST00000470278 DEFB131BA0A096LNP1 70 aa10.56□□□□□ -0.72
CDC42SE1-203ENST00000470278 ZNF727A8MUV8 499 aa10.56□□□□□ -0.72
CDC42SE1-203ENST00000470278 K7EN84 100 aa10.56□□□□□ -0.72
CDC42SE1-203ENST00000470278 ATP5G1P05496 136 aa10.56□□□□□ -0.72
CDC42SE1-203ENST00000470278 OCC1Q8TAD7 63 aa10.56□□□□□ -0.72
CDC42SE1-203ENST00000470278 MRPL16Q9NX20 251 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-203ENST00000470278 KLK5Q9Y337 293 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-203ENST00000470278 HERC2O95714 4834 aa10.55□□□□□ -0.72
CDC42SE1-203ENST00000470278 GAGE12BA1L429 117 aa10.55□□□□□ -0.72
CDC42SE1-203ENST00000470278 GAGE7O76087 117 aa10.55□□□□□ -0.72
CDC42SE1-203ENST00000470278 GAGE12FP0CL80 117 aa10.55□□□□□ -0.72
CDC42SE1-203ENST00000470278 GAGE12GP0CL81 117 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms