RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 ZNF705AQ6ZN79 300 aaPredicted RBP6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 TEX43Q6ZNM6 134 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 LINC00305Q7Z4B0 112 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 APRG1Q8IVJ8 170 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 STXBP6Q8NFX7 210 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 BLNKQ8WV28 456 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 CCDC140Q96MF4 163 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 VAMP8Q9BV40 100 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 MRPL36Q9P0J6 103 aaKnown RBP6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 RPH3ALQ9UNE2 315 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 APOBP04114 4563 aaKnown RBP6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 IGHV3-21A0A0B4J1V1 117 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 IGLC7A0M8Q6 106 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 PGPA6NDG6 321 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 CORTO00230 105 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 ZNF253O75346 499 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 HYPMO75409 117 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 CA1P00915 261 aaPredicted RBP6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 CRYGCP07315 174 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 SRIP30626 198 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 AMTP48728 403 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 KRTDAPP60985 99 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 PRR27Q6MZM9 219 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 RASL11AQ6T310 242 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 UNQ9165/PRO28630Q6UXU0 137 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 UBE2DNLQ8IWF7 75 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 NUDT10Q8NFP7 164 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 NUDT11Q96G61 164 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 LINC00479Q96M42 142 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 C20orf144Q9BQM9 153 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 SCRT2Q9NQ03 307 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 DAZ1Q9NQZ3 744 aaKnown RBP6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 THYN1Q9P016 225 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 EPDR1Q9UM22 224 aa6.47□□□□□ -1.37
SYNGAP1-205ENST00000470232 DEFB131BA0A096LNP1 70 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 DIRC3C9JPN6 131 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 HIST1H1EP10412 219 aaKnown RBP6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 MIFP14174 115 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 KLK9Q2XQG4 91 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 C1orf134Q5TEV5 83 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 C19orf35Q6ZS72 473 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 Q6ZTC4 211 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 MRPL52Q86TS9 123 aaKnown RBP6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 VN1R17PQ8TDU5 208 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 NRN1Q9NPD7 142 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 KLK9Q9UKQ9 250 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 HIGD1AQ9Y241 93 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 F11RQ9Y624 299 aaKnown RBP6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 S4R3C0 116 aa6.46□□□□□ -1.38
SYNGAP1-205ENST00000470232 IGHV3-35A0A0C4DH35 117 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 A0A1W2PS18 150 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 TEX22C9J3V5 150 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 TCAPO15273 167 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 ZNF324O75467 553 aaPredicted RBP6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 GPX1P07203 203 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 NBEAP1P0C6P0 100 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 GPR183P32249 361 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 LYZP61626 148 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 NUTF2P61970 127 aaKnown RBP6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 C5orf17Q8NAS9 161 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 NUP35Q8NFH5 326 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 OR4B1Q8NGF8 309 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 TSKUQ8WUA8 353 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 TMEM190Q8WZ59 177 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 SMIM12Q96EX1 92 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 FMC1Q96HJ9 113 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 MIEN1Q9BRT3 115 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 SNHG12Q9BXW3 62 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 RPP21Q9H633 154 aaKnown RBP6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 ZNF492Q9P255 531 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 PAM16Q9Y3D7 125 aa6.45□□□□□ -1.38
SYNGAP1-205ENST00000470232 IGLV2-18A0A075B6J9 118 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 H3BTX0 84 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 K7EMT4 169 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 NDUFA4O00483 81 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 TOMM40O96008 361 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 NTF3P20783 257 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 PLP1P60201 277 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 FAM162BQ5T6X4 162 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 ATP5L2Q7Z4Y8 100 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 Q8NAQ8 132 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 ZNF502Q8TBZ5 544 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 BORCS7Q96B45 105 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 DAZAP1Q96EP5 407 aaKnown RBP6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 GPR82Q96P67 336 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 ATG101Q9BSB4 218 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 Q9H3A6 140 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 OTORQ9NRC9 128 aa6.44□□□□□ -1.38
SYNGAP1-205ENST00000470232 IGLV11-55A0A075B6I3 123 aa6.43□□□□□ -1.38
SYNGAP1-205ENST00000470232 IGHV4-28A0A0C4DH34 117 aa6.43□□□□□ -1.38
SYNGAP1-205ENST00000470232 A8MWL6 223 aa6.43□□□□□ -1.38
SYNGAP1-205ENST00000470232 P01737 135 aa6.43□□□□□ -1.38
SYNGAP1-205ENST00000470232 RBMY1A1P0DJD3 496 aaKnown RBP6.43□□□□□ -1.38
SYNGAP1-205ENST00000470232 RBMY1CP0DJD4 496 aa6.43□□□□□ -1.38
SYNGAP1-205ENST00000470232 RAB4AP20338 218 aa6.43□□□□□ -1.38
SYNGAP1-205ENST00000470232 CAMPP49913 170 aa6.43□□□□□ -1.38
SYNGAP1-205ENST00000470232 SLAQ13239 276 aa6.43□□□□□ -1.38
SYNGAP1-205ENST00000470232 RBMY1FQ15415 496 aaKnown RBP6.43□□□□□ -1.38
SYNGAP1-205ENST00000470232 SPATA45Q537H7 98 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms