RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 CSN1S1P47710 185 aa6.29□□□□□ -1.4
SHROOM3-203ENST00000469923 CRYBA4P53673 196 aa6.29□□□□□ -1.4
SHROOM3-203ENST00000469923 FGF8P55075 233 aaPredicted RBP6.29□□□□□ -1.4
SHROOM3-203ENST00000469923 CCL18P55774 89 aa6.29□□□□□ -1.4
SHROOM3-203ENST00000469923 SERF2P84101 59 aa6.29□□□□□ -1.4
SHROOM3-203ENST00000469923 LYPD5Q6UWN5 251 aa6.29□□□□□ -1.4
SHROOM3-203ENST00000469923 PQLC2Q6ZP29 291 aa6.29□□□□□ -1.4
SHROOM3-203ENST00000469923 ACTR3CQ9C0K3 210 aaPredicted RBP6.29□□□□□ -1.4
SHROOM3-203ENST00000469923 HHLA3Q9XRX5 114 aa6.29□□□□□ -1.4
SHROOM3-203ENST00000469923 BOLA1Q9Y3E2 137 aa6.29□□□□□ -1.4
SHROOM3-203ENST00000469923 BORCS7-ASMTA0A0B4J1R7 106 aa6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 TYMSP04818 313 aa6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 NMBP08949 121 aa6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 FHITP49789 147 aa6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 CRIP1P50238 77 aa6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 SUMO1P63165 101 aaKnown RBP6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 LGALSLQ3ZCW2 172 aaPredicted RBP6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 Q6AWC8 147 aa6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 Q6ZRN7 208 aaPredicted RBP6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 SPATA12Q7Z6I5 190 aa6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 SUN5Q8TC36 379 aa6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 JPT2Q9H910 190 aa6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 MRPS16Q9Y3D3 137 aaKnown RBP6.28□□□□□ -1.4
SHROOM3-203ENST00000469923 RBAKDNA6NC62 111 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 PGPEP1LA6NFU8 196 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 TAAR5O14804 337 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 NXPH4O95158 308 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 MBP02144 154 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 UBE2G2P60604 165 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 TMUB2Q71RG4 321 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 WFDC10BQ8IUB3 73 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 Q8N3U1 123 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 KCNRGQ8N5I3 272 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 CMTM2Q8TAZ6 248 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 TREM1Q9NP99 234 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 PSG8Q9UQ74 426 aa6.27□□□□□ -1.41
SHROOM3-203ENST00000469923 C9JCJ5 164 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 K7EQD1 137 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 CXorf1O96002 111 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 TCRAP04437 139 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 MED14OSP0DP75 135 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 LINC00315P59091 139 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 IBA57Q5T440 356 aaKnown RBP6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 PRNTQ86SH4 94 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 IQCF2Q8IXL9 164 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 ZNF680Q8NEM1 530 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 RASL10AQ92737 203 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 C18orf15Q96N68 181 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 ARPC5LQ9BPX5 153 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 EPDR1Q9UM22 224 aa6.26□□□□□ -1.41
SHROOM3-203ENST00000469923 MYCBP2O75592 4640 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 IGKV3D-20A0A0C4DH25 116 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 A0A0D9SG52 128 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 CTXND1A0A1B0GTU2 59 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 C16orf90A8MZG2 172 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 BCL2L11O43521 198 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 DNAH10OSP0CZ25 163 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 GYPEP15421 78 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 FAM3BP58499 235 aaPredicted RBP6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 ZNF345Q14585 488 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 FAM74A1Q5RGS3 127 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 AKR1C8PQ5T2L2 129 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 UPK3BQ9BT76 320 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 SAMD10Q9BYL1 202 aa6.25□□□□□ -1.41
SHROOM3-203ENST00000469923 TRGV4A0A0C4DH28 118 aa6.24□□□□□ -1.41
SHROOM3-203ENST00000469923 A0A1B0GV50 99 aa6.24□□□□□ -1.41
SHROOM3-203ENST00000469923 KANTRA0A1W2PQU2 76 aa6.24□□□□□ -1.41
SHROOM3-203ENST00000469923 H3BNG1 76 aa6.24□□□□□ -1.41
SHROOM3-203ENST00000469923 GCGP01275 180 aa6.24□□□□□ -1.41
SHROOM3-203ENST00000469923 HAMPP81172 84 aa6.24□□□□□ -1.41
SHROOM3-203ENST00000469923 ZNF415Q09FC8 603 aa6.24□□□□□ -1.41
SHROOM3-203ENST00000469923 FAM159AQ6UWV7 190 aa6.24□□□□□ -1.41
SHROOM3-203ENST00000469923 DNAJC30Q96LL9 226 aa6.24□□□□□ -1.41
SHROOM3-203ENST00000469923 ZNF471Q9BX82 626 aaPredicted RBP6.24□□□□□ -1.41
SHROOM3-203ENST00000469923 TMEM167BQ9NRX6 74 aa6.24□□□□□ -1.41
SHROOM3-203ENST00000469923 PRO0255Q9UI72 69 aa6.24□□□□□ -1.41
SHROOM3-203ENST00000469923 SRRM2Q9UQ35 2752 aaKnown RBP6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 TRBV7-9A0A0J9YWB2 115 aa6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 GRIFINA4D1Z8 144 aa6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 RNASE3P12724 160 aaKnown RBP6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 CCL20P78556 96 aa6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 IFITM2Q01629 132 aa6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 TDRG1Q3Y452 100 aa6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 CFAP126Q5VTH2 177 aa6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 ARL6IP6Q8N6S5 226 aa6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 OR4C5Q8NGB2 326 aa6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 TMED6Q8WW62 240 aa6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 LENEPQ9Y5L5 61 aa6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 ICOSQ9Y6W8 199 aa6.23□□□□□ -1.41
SHROOM3-203ENST00000469923 TRAV21A0A0B4J279 112 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 A0A1W2PRE2 83 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 MAP1LC3B2A6NCE7 125 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 FAM74A7A6NL05 159 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 M0R2P5 195 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 SIVA1O15304 175 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 RS1O15537 224 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 SEC11BP0C7V7 166 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 GATA1P15976 413 aaPredicted RBP6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 KRTAP10-1P60331 282 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 FLI1Q01543 452 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms