RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 CLEC19AQ6UXS0 136 aa9.69□□□□□ -0.86
USP11-206ENST00000469080 PATE2Q6UY27 113 aa9.69□□□□□ -0.86
USP11-206ENST00000469080 Q8N7P7 452 aa9.69□□□□□ -0.86
USP11-206ENST00000469080 WIPF2Q8TF74 440 aaPredicted RBP9.69□□□□□ -0.86
USP11-206ENST00000469080 TRAV4A0A0B4J268 109 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 TMEM8BA6NDV4 472 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 RHODO00212 210 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 LINC00694P0DN24 101 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 EMP1P54849 157 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 Q71RC1 249 aaPredicted RBP9.68□□□□□ -0.86
USP11-206ENST00000469080 ZNF329Q86UD4 541 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 PPDPFLQ8WWR9 84 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 PRO0461Q9UI25 63 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 RPL7P18124 248 aaKnown RBP9.68□□□□□ -0.86
USP11-206ENST00000469080 ITPR3Q14573 2671 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 FBN2P35556 2912 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 LINC01548A6NM66 108 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 Q8TAT8 98 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 CCL19Q99731 98 aa9.68□□□□□ -0.86
USP11-206ENST00000469080 TRAV8-2A0A0B4J237 113 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 CENPVL3A0A0U1RRI6 287 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 PEX7O00628 323 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 IGLV2-23P01705 113 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 C12orf74Q32Q52 190 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 Q9H3A6 140 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 HLA-DMBP28068 263 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 PRR20EP86478 221 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 PRR20CP86479 221 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 PRR20DP86480 221 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 PRR20BP86481 221 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 PRR20AP86496 221 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 SRSF9Q13242 221 aaKnown RBP eCLIP9.67□□□□□ -0.86
USP11-206ENST00000469080 HIST2H2BCQ6DN03 193 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 ZNF414Q96IQ9 312 aa9.67□□□□□ -0.86
USP11-206ENST00000469080 ZNF688P0C7X2 276 aa9.66□□□□□ -0.86
USP11-206ENST00000469080 ZNF503Q96F45 646 aa9.66□□□□□ -0.86
USP11-206ENST00000469080 SLC25A2Q9BXI2 301 aa9.66□□□□□ -0.86
USP11-206ENST00000469080 C7orf69Q9H7B7 122 aa9.66□□□□□ -0.86
USP11-206ENST00000469080 CEND1Q8N111 149 aa9.66□□□□□ -0.86
USP11-206ENST00000469080 C11orf44Q8N8P7 122 aa9.66□□□□□ -0.86
USP11-206ENST00000469080 PHLDA1Q8WV24 401 aaPredicted RBP9.66□□□□□ -0.86
USP11-206ENST00000469080 HIST1H4GQ99525 98 aa9.66□□□□□ -0.86
USP11-206ENST00000469080 PRSS46E5RG02 174 aa9.65□□□□□ -0.86
USP11-206ENST00000469080 TMEM262E9PQX1 116 aa9.65□□□□□ -0.86
USP11-206ENST00000469080 SPRY2O43597 315 aa9.65□□□□□ -0.86
USP11-206ENST00000469080 IGLV2-8P01709 118 aa9.65□□□□□ -0.86
USP11-206ENST00000469080 P01737 135 aa9.65□□□□□ -0.86
USP11-206ENST00000469080 IGKV3-20P01619 116 aa9.65□□□□□ -0.86
USP11-206ENST00000469080 RRN3P1Q2M238 152 aa9.65□□□□□ -0.86
USP11-206ENST00000469080 AGRNO00468 2067 aa9.65□□□□□ -0.86
USP11-206ENST00000469080 IGLV1-47P01700 117 aa9.65□□□□□ -0.87
USP11-206ENST00000469080 IGKV2-40A0A087WW87 121 aaPredicted RBP9.64□□□□□ -0.87
USP11-206ENST00000469080 IGKV2D-40P01614 121 aaPredicted RBP9.64□□□□□ -0.87
USP11-206ENST00000469080 Q6ZQT7 251 aa9.64□□□□□ -0.87
USP11-206ENST00000469080 CARD19Q96LW7 228 aa9.64□□□□□ -0.87
USP11-206ENST00000469080 KLF12Q9Y4X4 402 aa9.64□□□□□ -0.87
USP11-206ENST00000469080 FAM90A9PA6NNJ1 464 aa9.64□□□□□ -0.87
USP11-206ENST00000469080 F5H768 121 aa9.64□□□□□ -0.87
USP11-206ENST00000469080 CRLF1O75462 422 aa9.64□□□□□ -0.87
USP11-206ENST00000469080 C3orf36Q3SXR2 165 aa9.64□□□□□ -0.87
USP11-206ENST00000469080 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
USP11-206ENST00000469080 SLC25A39Q9BZJ4 359 aaPredicted RBP9.64□□□□□ -0.87
USP11-206ENST00000469080 TMEM126AQ9H061 195 aa9.64□□□□□ -0.87
USP11-206ENST00000469080 C21orf62Q9NYP8 219 aa9.64□□□□□ -0.87
USP11-206ENST00000469080 ORM1P02763 201 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 FAM106CPP0CH98 169 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 HTN1P15515 57 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 SMCPP49901 116 aaPredicted RBP9.63□□□□□ -0.87
USP11-206ENST00000469080 DEFB1P60022 68 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 C15orf32Q32M92 178 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 DLX4Q92988 240 aaPredicted RBP9.63□□□□□ -0.87
USP11-206ENST00000469080 EDA2RQ9HAV5 297 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 ITLN2Q8WWU7 325 aaPredicted RBP9.63□□□□□ -0.87
USP11-206ENST00000469080 RNF125Q96EQ8 232 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 DKK2Q9UBU2 259 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 DLX6P56179 175 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 ATP6V0E2Q8NHE4 81 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 AAMDCQ9H7C9 122 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 KAAG1Q9UBP8 84 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 ITPR2Q14571 2701 aa9.63□□□□□ -0.87
USP11-206ENST00000469080 TRBV25-1A0A075B6N4 114 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 IGHV4-61A0A0C4DH41 118 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 FAM106AQ4KMX7 169 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 RNF182Q8N6D2 247 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 DNAJC30Q96LL9 226 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 EPDR1Q9UM22 224 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 IGKV2D-26A0A0A0MRZ7 120 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 ATP6V0E1O15342 81 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 CFAP126Q5VTH2 177 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 GTSCR1Q86UQ5 136 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 TNFRSF6BO95407 300 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 EFNA4P52798 201 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 ATP5IP56385 69 aaPredicted RBP9.62□□□□□ -0.87
USP11-206ENST00000469080 TMEM75Q8N9X5 138 aa9.62□□□□□ -0.87
USP11-206ENST00000469080 IGKV1D-37A0A075B6S9 117 aa9.61□□□□□ -0.87
USP11-206ENST00000469080 TEN1Q86WV5 123 aa9.61□□□□□ -0.87
USP11-206ENST00000469080 CHCHD5Q9BSY4 110 aa9.61□□□□□ -0.87
USP11-206ENST00000469080 H3BUX3 64 aa9.61□□□□□ -0.87
USP11-206ENST00000469080 LOXL1Q08397 574 aaPredicted RBP9.61□□□□□ -0.87
USP11-206ENST00000469080 POU2AF1Q16633 256 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms