RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 FOXC2Q99958 501 aa12.09□□□□□ -0.47
TSPAN4-211ENST00000468468 HHLA3Q9XRX5 114 aa12.09□□□□□ -0.47
TSPAN4-211ENST00000468468 IGKV2D-26A0A0A0MRZ7 120 aa12.08□□□□□ -0.48
TSPAN4-211ENST00000468468 IGHV7-4-1A0A0J9YVY3 117 aa12.08□□□□□ -0.48
TSPAN4-211ENST00000468468 Q6ZQT7 251 aa12.08□□□□□ -0.48
TSPAN4-211ENST00000468468 MRPL53Q96EL3 112 aaKnown RBP12.08□□□□□ -0.48
TSPAN4-211ENST00000468468 IGLV2-18A0A075B6J9 118 aa12.08□□□□□ -0.48
TSPAN4-211ENST00000468468 TMEM8BA6NDV4 472 aa12.08□□□□□ -0.48
TSPAN4-211ENST00000468468 ATP5G2Q06055 141 aa12.08□□□□□ -0.48
TSPAN4-211ENST00000468468 TM4SF20Q53R12 229 aa12.08□□□□□ -0.48
TSPAN4-211ENST00000468468 PIFOQ8TCI5 191 aa12.08□□□□□ -0.48
TSPAN4-211ENST00000468468 UFC1Q9Y3C8 167 aa12.08□□□□□ -0.48
TSPAN4-211ENST00000468468 FLNCQ14315 2725 aa12.08□□□□□ -0.48
TSPAN4-211ENST00000468468 NPFFO15130 113 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 IGKCP01834 107 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 TRAV26-2A0A0B4J265 109 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 A0A1W2PPM0 123 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 SCGB1A1P11684 91 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 C9orf47Q6ZRZ4 202 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 C5orf56Q8N8D9 126 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 TTTY13Q9BZ97 58 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 HIF1ANQ9NWT6 349 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 U3KQE9 123 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 GAGE12HA6NDE8 117 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 SMIM17P0DL12 118 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 SPANXN1Q5VSR9 72 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 TMEM219Q86XT9 240 aa12.07□□□□□ -0.48
TSPAN4-211ENST00000468468 ATP5LO75964 103 aa12.06□□□□□ -0.48
TSPAN4-211ENST00000468468 PSMG4Q5JS54 123 aa12.06□□□□□ -0.48
TSPAN4-211ENST00000468468 C16orf92Q96LL3 132 aa12.06□□□□□ -0.48
TSPAN4-211ENST00000468468 LINC00527Q9UJ94 153 aa12.06□□□□□ -0.48
TSPAN4-211ENST00000468468 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.06□□□□□ -0.48
TSPAN4-211ENST00000468468 GTSCR1Q86UQ5 136 aa12.06□□□□□ -0.48
TSPAN4-211ENST00000468468 NRACQ8N912 160 aa12.06□□□□□ -0.48
TSPAN4-211ENST00000468468 DPM2O94777 84 aa12.05□□□□□ -0.48
TSPAN4-211ENST00000468468 LAGE3Q14657 143 aa12.05□□□□□ -0.48
TSPAN4-211ENST00000468468 CELSR1Q9NYQ6 3014 aa12.05□□□□□ -0.48
TSPAN4-211ENST00000468468 ZC2HC1BQ5TFG8 222 aa12.04□□□□□ -0.48
TSPAN4-211ENST00000468468 MYOZ3Q8TDC0 251 aa12.04□□□□□ -0.48
TSPAN4-211ENST00000468468 USP9XQ93008 2570 aaPredicted RBP12.04□□□□□ -0.48
TSPAN4-211ENST00000468468 TRAV41A0A0B4J266 112 aa12.04□□□□□ -0.48
TSPAN4-211ENST00000468468 PRB1P04280 392 aa12.04□□□□□ -0.48
TSPAN4-211ENST00000468468 TMEM160Q9NX00 188 aa12.04□□□□□ -0.48
TSPAN4-211ENST00000468468 IGHV3OR16-10A0A075B7F0 116 aa12.03□□□□□ -0.48
TSPAN4-211ENST00000468468 H3BVH4 76 aa12.03□□□□□ -0.48
TSPAN4-211ENST00000468468 J3KRW8 73 aa12.03□□□□□ -0.48
TSPAN4-211ENST00000468468 GCSHP23434 173 aa12.03□□□□□ -0.48
TSPAN4-211ENST00000468468 PRR9Q5T870 116 aa12.03□□□□□ -0.48
TSPAN4-211ENST00000468468 OR5A1Q8NGJ0 315 aa12.03□□□□□ -0.48
TSPAN4-211ENST00000468468 IGHV4-4A0A075B6R2 117 aa12.03□□□□□ -0.48
TSPAN4-211ENST00000468468 TRAV40A0A0B4J280 105 aa12.03□□□□□ -0.48
TSPAN4-211ENST00000468468 C20orf173Q96LM9 149 aa12.03□□□□□ -0.48
TSPAN4-211ENST00000468468 CCL19Q99731 98 aa12.03□□□□□ -0.48
TSPAN4-211ENST00000468468 HIGD1BQ9P298 99 aa12.03□□□□□ -0.48
TSPAN4-211ENST00000468468 IGF1P05019 195 aa12.02□□□□□ -0.48
TSPAN4-211ENST00000468468 CD300EQ496F6 205 aaPredicted RBP12.02□□□□□ -0.48
TSPAN4-211ENST00000468468 GLMPQ8WWB7 406 aa12.02□□□□□ -0.48
TSPAN4-211ENST00000468468 CHAC1Q9BUX1 264 aa12.02□□□□□ -0.48
TSPAN4-211ENST00000468468 UTP20O75691 2785 aaKnown RBP12.02□□□□□ -0.49
TSPAN4-211ENST00000468468 ZFYVE26Q68DK2 2539 aa12.02□□□□□ -0.49
TSPAN4-211ENST00000468468 ARL3P36405 182 aa12.02□□□□□ -0.49
TSPAN4-211ENST00000468468 MRPL35Q9NZE8 188 aaKnown RBP12.02□□□□□ -0.49
TSPAN4-211ENST00000468468 MOB4Q9Y3A3 225 aa12.02□□□□□ -0.49
TSPAN4-211ENST00000468468 SPG11Q96JI7 2443 aa12.02□□□□□ -0.49
TSPAN4-211ENST00000468468 DOPEY1Q5JWR5 2465 aa12.02□□□□□ -0.49
TSPAN4-211ENST00000468468 CRYBG3Q68DQ2 2970 aa12.02□□□□□ -0.49
TSPAN4-211ENST00000468468 IGHV4-61A0A0C4DH41 118 aa12.01□□□□□ -0.49
TSPAN4-211ENST00000468468 SMIM13P0DJ93 91 aa12.01□□□□□ -0.49
TSPAN4-211ENST00000468468 FXYD2P54710 66 aa12.01□□□□□ -0.49
TSPAN4-211ENST00000468468 SRSF1Q07955 248 aaKnown RBP eCLIP12.01□□□□□ -0.49
TSPAN4-211ENST00000468468 C9orf139Q6ZV77 190 aa12.01□□□□□ -0.49
TSPAN4-211ENST00000468468 ABCA2Q9BZC7 2435 aa12.01□□□□□ -0.49
TSPAN4-211ENST00000468468 TRBV25-1A0A075B6N4 114 aa12.01□□□□□ -0.49
TSPAN4-211ENST00000468468 FAM223BA6NKX1 122 aa12.01□□□□□ -0.49
TSPAN4-211ENST00000468468 FABP2P12104 132 aa12.01□□□□□ -0.49
TSPAN4-211ENST00000468468 FAM223AQ8IWN6 122 aa12.01□□□□□ -0.49
TSPAN4-211ENST00000468468 USP24Q9UPU5 2620 aa12.01□□□□□ -0.49
TSPAN4-211ENST00000468468 MTURNQ8N3F0 131 aa12.01□□□□□ -0.49
TSPAN4-211ENST00000468468 K7ERJ3 54 aa12□□□□□ -0.49
TSPAN4-211ENST00000468468 MAP1AP78559 2803 aaPredicted RBP12□□□□□ -0.49
TSPAN4-211ENST00000468468 K7EMI3 77 aa12□□□□□ -0.49
TSPAN4-211ENST00000468468 GATA3P23771 443 aa12□□□□□ -0.49
TSPAN4-211ENST00000468468 WFDC2Q14508 124 aa12□□□□□ -0.49
TSPAN4-211ENST00000468468 C19orf54Q5BKX5 351 aa12□□□□□ -0.49
TSPAN4-211ENST00000468468 SAMD5Q5TGI4 173 aa12□□□□□ -0.49
TSPAN4-211ENST00000468468 UNQ9165/PRO28630Q6UXU0 137 aa12□□□□□ -0.49
TSPAN4-211ENST00000468468 SH2D6Q7Z4S9 175 aa12□□□□□ -0.49
TSPAN4-211ENST00000468468 MRAP2Q96G30 205 aa12□□□□□ -0.49
TSPAN4-211ENST00000468468 GEMIN7Q9H840 131 aaKnown RBP12□□□□□ -0.49
TSPAN4-211ENST00000468468 LENEPQ9Y5L5 61 aa12□□□□□ -0.49
TSPAN4-211ENST00000468468 SPRY2O43597 315 aa11.99□□□□□ -0.49
TSPAN4-211ENST00000468468 TRBV12-3P01733 135 aa11.99□□□□□ -0.49
TSPAN4-211ENST00000468468 CSMD2Q7Z408 3487 aa11.99□□□□□ -0.49
TSPAN4-211ENST00000468468 A0A087WX48 190 aa11.99□□□□□ -0.49
TSPAN4-211ENST00000468468 M0R381 172 aa11.99□□□□□ -0.49
TSPAN4-211ENST00000468468 LINC00477Q96M19 166 aa11.99□□□□□ -0.49
TSPAN4-211ENST00000468468 BRD3OSQ6XYD6 125 aa11.98□□□□□ -0.49
TSPAN4-211ENST00000468468 NRGNQ92686 78 aa11.98□□□□□ -0.49
TSPAN4-211ENST00000468468 PIMREGQ9BSJ6 248 aa11.98□□□□□ -0.49
TSPAN4-211ENST00000468468 SMIM2Q9BVW6 85 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 673.4 ms