RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 FAM159AQ6UWV7 190 aa6.25□□□□□ -1.41
BRCA1-208ENST00000468300 OR4F17Q8NGA8 305 aa6.25□□□□□ -1.41
BRCA1-208ENST00000468300 GAGE10A6NGK3 116 aa6.25□□□□□ -1.41
BRCA1-208ENST00000468300 M0R3E3 92 aa6.25□□□□□ -1.41
BRCA1-208ENST00000468300 LGALS9O00182 355 aa6.25□□□□□ -1.41
BRCA1-208ENST00000468300 ZNF253O75346 499 aa6.25□□□□□ -1.41
BRCA1-208ENST00000468300 HOXD3P31249 432 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-208ENST00000468300 PNRC1Q12796 327 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-208ENST00000468300 TMEM183BQ1AE95 376 aa6.25□□□□□ -1.41
BRCA1-208ENST00000468300 KIAA1644Q3SXP7 199 aa6.25□□□□□ -1.41
BRCA1-208ENST00000468300 SGK494Q96LW2 274 aa6.25□□□□□ -1.41
BRCA1-208ENST00000468300 TMEM189A5PLL7 270 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 CD300EQ496F6 205 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-208ENST00000468300 CENPWQ5EE01 88 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 C11orf44Q8N8P7 122 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 MLST8Q9BVC4 326 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 DAZ1Q9NQZ3 744 aaKnown RBP6.24□□□□□ -1.41
BRCA1-208ENST00000468300 SELENOKQ9Y6D0 94 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 DIRC3C9JPN6 131 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 SLC25A5P05141 298 aaKnown RBP6.24□□□□□ -1.41
BRCA1-208ENST00000468300 SLURP1P55000 103 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 RPEL1Q2QD12 228 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 LINC01559Q495D7 138 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 MRPL53Q96EL3 112 aaKnown RBP6.24□□□□□ -1.41
BRCA1-208ENST00000468300 C20orf173Q96LM9 149 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 LY96Q9Y6Y9 160 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 TENM1Q9UKZ4 2725 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 TRAV8-1A0A0A6YYK1 113 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 B4DEV8 164 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 HIST1H2BKO60814 126 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 LTAP01374 205 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 HIST1H2BJP06899 126 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 HIST1H2BOP23527 126 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 HIST1H2BBP33778 126 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 HIST1H2BDP58876 126 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 HIST1H2BCP62807 126 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 FHL3Q13643 280 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 HIST2H2BEQ16778 126 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-208ENST00000468300 RNF182Q8N6D2 247 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 HIST1H2BHQ93079 126 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 HIST1H2BNQ99877 126 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 HIST1H2BMQ99879 126 aa6.24□□□□□ -1.41
BRCA1-208ENST00000468300 GAGE12JA6NER3 117 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 OR4C46A6NHA9 309 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 GAGE7O76087 117 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 GAGE12FP0CL80 117 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 GAGE12GP0CL81 117 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 GAGE12IP0CL82 117 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 SYNJ2BPP57105 145 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 RPL24P83731 157 aaKnown RBP6.23□□□□□ -1.41
BRCA1-208ENST00000468300 GAGE4Q13068 117 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 ADIRFQ15847 76 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 TAL2Q16559 108 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 LINC00322Q6ZN03 302 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-208ENST00000468300 C8orf86Q6ZUL3 223 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 FAM19A5Q7Z5A7 132 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-208ENST00000468300 RHPN1-AS1Q9BWJ2 59 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 TUBA4BQ9H853 241 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 TMEM242Q9NWH2 141 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 PRAC2D3DTV9 90 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 HINT1P49773 126 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-208ENST00000468300 AMMECR1LQ6DCA0 310 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 TRBV6-1A0A0K0K1D8 114 aa6.23□□□□□ -1.41
BRCA1-208ENST00000468300 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-208ENST00000468300 HNRNPA3P51991 378 aaKnown RBP6.22□□□□□ -1.41
BRCA1-208ENST00000468300 PSG9Q00887 426 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 ANXA2RQ3ZCQ2 193 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 FAM106AQ4KMX7 169 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 GOLT1AQ6ZVE7 132 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 TMEM75Q8N9X5 138 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 KLHL30-AS1Q8NEE0 82 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 DLX4Q92988 240 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-208ENST00000468300 DNAJC30Q96LL9 226 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 RNF114Q9Y508 228 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 FBN1P35555 2871 aaKnown RBP6.22□□□□□ -1.41
BRCA1-208ENST00000468300 C2orf70A6NJV1 201 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 FABP5P3A8MUU1 101 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 LINC01619G3V211 115 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 GALR1P47211 349 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 GNG4P50150 75 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 ELOBQ15370 118 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 FAM162BQ5T6X4 162 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 Q86TA4 180 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 ZNF575Q86XF7 245 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 DCANP1Q8TF63 244 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 FMC1Q96HJ9 113 aa6.22□□□□□ -1.41
BRCA1-208ENST00000468300 CD33P20138 364 aa6.21□□□□□ -1.41
BRCA1-208ENST00000468300 CBLN1P23435 193 aa6.21□□□□□ -1.41
BRCA1-208ENST00000468300 TMEM78Q5T7P6 136 aa6.21□□□□□ -1.41
BRCA1-208ENST00000468300 VGLL1Q99990 258 aa6.21□□□□□ -1.41
BRCA1-208ENST00000468300 CMYA5Q8N3K9 4069 aa6.21□□□□□ -1.42
BRCA1-208ENST00000468300 IGKV2-40A0A087WW87 121 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-208ENST00000468300 J3QR89 54 aa6.21□□□□□ -1.42
BRCA1-208ENST00000468300 IGKV2D-40P01614 121 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-208ENST00000468300 PFN1P07737 140 aaKnown RBP6.21□□□□□ -1.42
BRCA1-208ENST00000468300 CXCL1P09341 107 aa6.21□□□□□ -1.42
BRCA1-208ENST00000468300 LINC01620Q4KN68 170 aa6.21□□□□□ -1.42
BRCA1-208ENST00000468300 LCN12Q6JVE5 192 aa6.21□□□□□ -1.42
BRCA1-208ENST00000468300 RNASE7Q9H1E1 156 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms