RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 CDK2AP2O75956 126 aa10.09□□□□□ -0.79
ATPAF2-204ENST00000467560 NXPH4O95158 308 aa10.09□□□□□ -0.79
ATPAF2-204ENST00000467560 RAB2AP61019 212 aa10.09□□□□□ -0.79
ATPAF2-204ENST00000467560 ZNF415Q09FC8 603 aa10.09□□□□□ -0.79
ATPAF2-204ENST00000467560 TMEM183BQ1AE95 376 aa10.09□□□□□ -0.79
ATPAF2-204ENST00000467560 Q6AWC8 147 aa10.09□□□□□ -0.79
ATPAF2-204ENST00000467560 TMEM183AQ8IXX5 376 aa10.09□□□□□ -0.79
ATPAF2-204ENST00000467560 ZNF479Q96JC4 524 aa10.09□□□□□ -0.79
ATPAF2-204ENST00000467560 PRO0255Q9UI72 69 aa10.09□□□□□ -0.79
ATPAF2-204ENST00000467560 HHLA3Q9XRX5 114 aa10.09□□□□□ -0.79
ATPAF2-204ENST00000467560 ICOSQ9Y6W8 199 aa10.09□□□□□ -0.79
ATPAF2-204ENST00000467560 PGPA6NDG6 321 aa10.08□□□□□ -0.8
ATPAF2-204ENST00000467560 SIVA1O15304 175 aa10.08□□□□□ -0.8
ATPAF2-204ENST00000467560 HMGB3O15347 200 aaKnown RBP10.08□□□□□ -0.8
ATPAF2-204ENST00000467560 FUSP35637 526 aaKnown RBP eCLIP10.08□□□□□ -0.8
ATPAF2-204ENST00000467560 AKR1C8PQ5T2L2 129 aa10.08□□□□□ -0.8
ATPAF2-204ENST00000467560 LYPD5Q6UWN5 251 aa10.08□□□□□ -0.8
ATPAF2-204ENST00000467560 DPPA3Q6W0C5 159 aa10.08□□□□□ -0.8
ATPAF2-204ENST00000467560 C9orf62Q8N4C0 152 aa10.08□□□□□ -0.8
ATPAF2-204ENST00000467560 ACTR3CQ9C0K3 210 aaPredicted RBP10.08□□□□□ -0.8
ATPAF2-204ENST00000467560 OTORQ9NRC9 128 aa10.08□□□□□ -0.8
ATPAF2-204ENST00000467560 RPH3ALQ9UNE2 315 aa10.08□□□□□ -0.8
ATPAF2-204ENST00000467560 TRAV8-1A0A0A6YYK1 113 aa10.07□□□□□ -0.8
ATPAF2-204ENST00000467560 GNRH2O43555 120 aa10.07□□□□□ -0.8
ATPAF2-204ENST00000467560 BTF3P20290 206 aaKnown RBP10.07□□□□□ -0.8
ATPAF2-204ENST00000467560 CDC34P49427 236 aaPredicted RBP10.07□□□□□ -0.8
ATPAF2-204ENST00000467560 RAB5CP51148 216 aa10.07□□□□□ -0.8
ATPAF2-204ENST00000467560 GNG5P63218 68 aa10.07□□□□□ -0.8
ATPAF2-204ENST00000467560 MAPKAPK5-AS1Q8N8E1 139 aa10.07□□□□□ -0.8
ATPAF2-204ENST00000467560 SH3BGRL3Q9H299 93 aa10.07□□□□□ -0.8
ATPAF2-204ENST00000467560 F6UZH7 168 aa10.06□□□□□ -0.8
ATPAF2-204ENST00000467560 STAG3L2P0CL84 134 aa10.06□□□□□ -0.8
ATPAF2-204ENST00000467560 STAG3L3P0CL85 134 aa10.06□□□□□ -0.8
ATPAF2-204ENST00000467560 GOLT1AQ6ZVE7 132 aa10.06□□□□□ -0.8
ATPAF2-204ENST00000467560 TMED6Q8WW62 240 aa10.06□□□□□ -0.8
ATPAF2-204ENST00000467560 RASL10AQ92737 203 aa10.06□□□□□ -0.8
ATPAF2-204ENST00000467560 NAGKQ9UJ70 344 aa10.06□□□□□ -0.8
ATPAF2-204ENST00000467560 LENEPQ9Y5L5 61 aa10.06□□□□□ -0.8
ATPAF2-204ENST00000467560 CTXND1A0A1B0GTU2 59 aa10.05□□□□□ -0.8
ATPAF2-204ENST00000467560 K7EQD1 137 aa10.05□□□□□ -0.8
ATPAF2-204ENST00000467560 TDRG1Q3Y452 100 aa10.05□□□□□ -0.8
ATPAF2-204ENST00000467560 FAM159AQ6UWV7 190 aa10.05□□□□□ -0.8
ATPAF2-204ENST00000467560 ARL6IP6Q8N6S5 226 aa10.05□□□□□ -0.8
ATPAF2-204ENST00000467560 SUN5Q8TC36 379 aa10.05□□□□□ -0.8
ATPAF2-204ENST00000467560 RAB24Q969Q5 203 aa10.05□□□□□ -0.8
ATPAF2-204ENST00000467560 SGK494Q96LW2 274 aa10.05□□□□□ -0.8
ATPAF2-204ENST00000467560 TRGV4A0A0C4DH28 118 aa10.04□□□□□ -0.8
ATPAF2-204ENST00000467560 IGHV3-16A0A0C4DH30 117 aa10.04□□□□□ -0.8
ATPAF2-204ENST00000467560 CXorf1O96002 111 aa10.04□□□□□ -0.8
ATPAF2-204ENST00000467560 MRPL23Q16540 153 aaKnown RBP10.04□□□□□ -0.8
ATPAF2-204ENST00000467560 WFDC10BQ8IUB3 73 aa10.04□□□□□ -0.8
ATPAF2-204ENST00000467560 IQCF2Q8IXL9 164 aa10.04□□□□□ -0.8
ATPAF2-204ENST00000467560 TMEM167BQ9NRX6 74 aa10.04□□□□□ -0.8
ATPAF2-204ENST00000467560 TRGV11A0A075B6L2 103 aa10.03□□□□□ -0.8
ATPAF2-204ENST00000467560 LOC100131303A0A0U1RQF7 123 aa10.03□□□□□ -0.8
ATPAF2-204ENST00000467560 TYMSP04818 313 aa10.03□□□□□ -0.8
ATPAF2-204ENST00000467560 ARL14EPLP0DKL9 152 aa10.03□□□□□ -0.8
ATPAF2-204ENST00000467560 GYPEP15421 78 aa10.03□□□□□ -0.8
ATPAF2-204ENST00000467560 SLAQ13239 276 aa10.03□□□□□ -0.8
ATPAF2-204ENST00000467560 NEGR1Q7Z3B1 354 aa10.03□□□□□ -0.8
ATPAF2-204ENST00000467560 CMTM2Q8TAZ6 248 aa10.03□□□□□ -0.8
ATPAF2-204ENST00000467560 SPXQ9BT56 116 aa10.03□□□□□ -0.8
ATPAF2-204ENST00000467560 C11orf21Q9P2W6 132 aa10.03□□□□□ -0.8
ATPAF2-204ENST00000467560 ZNF80P51504 273 aaPredicted RBP10.02□□□□□ -0.81
ATPAF2-204ENST00000467560 TREM1Q9NP99 234 aa10.02□□□□□ -0.81
ATPAF2-204ENST00000467560 TRAV4A0A0B4J268 109 aa10.01□□□□□ -0.81
ATPAF2-204ENST00000467560 DNAH10OSP0CZ25 163 aa10.01□□□□□ -0.81
ATPAF2-204ENST00000467560 SRIP30626 198 aa10.01□□□□□ -0.81
ATPAF2-204ENST00000467560 FAM74A1Q5RGS3 127 aa10.01□□□□□ -0.81
ATPAF2-204ENST00000467560 Q8N1X5 172 aa10.01□□□□□ -0.81
ATPAF2-204ENST00000467560 MBD3L1Q8WWY6 194 aa10.01□□□□□ -0.81
ATPAF2-204ENST00000467560 NKX6-2Q9C056 277 aaPredicted RBP10.01□□□□□ -0.81
ATPAF2-204ENST00000467560 ARL2-SNX15V9GYD0 113 aa10.01□□□□□ -0.81
ATPAF2-204ENST00000467560 TRAV21A0A0B4J279 112 aa10□□□□□ -0.81
ATPAF2-204ENST00000467560 M0R2P5 195 aa10□□□□□ -0.81
ATPAF2-204ENST00000467560 IGLV2-11P01706 119 aa10□□□□□ -0.81
ATPAF2-204ENST00000467560 GCHFRP30047 84 aa10□□□□□ -0.81
ATPAF2-204ENST00000467560 SULT1A2P50226 295 aa10□□□□□ -0.81
ATPAF2-204ENST00000467560 ZNF726P1Q15940 193 aa10□□□□□ -0.81
ATPAF2-204ENST00000467560 TMEM75Q8N9X5 138 aa10□□□□□ -0.81
ATPAF2-204ENST00000467560 OR4C5Q8NGB2 326 aa10□□□□□ -0.81
ATPAF2-204ENST00000467560 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
ATPAF2-204ENST00000467560 A0A1W2PRE2 83 aa9.99□□□□□ -0.81
ATPAF2-204ENST00000467560 TEX46H3BTG2 121 aa9.99□□□□□ -0.81
ATPAF2-204ENST00000467560 TCRAP04437 139 aa9.99□□□□□ -0.81
ATPAF2-204ENST00000467560 PPT1P50897 306 aa9.99□□□□□ -0.81
ATPAF2-204ENST00000467560 SCRT2Q9NQ03 307 aa9.99□□□□□ -0.81
ATPAF2-204ENST00000467560 LY96Q9Y6Y9 160 aa9.99□□□□□ -0.81
ATPAF2-204ENST00000467560 HERC1Q15751 4861 aa9.98□□□□□ -0.81
ATPAF2-204ENST00000467560 SERTM2A0A1B0GWG4 89 aa9.98□□□□□ -0.81
ATPAF2-204ENST00000467560 MAP1LC3B2A6NCE7 125 aa9.98□□□□□ -0.81
ATPAF2-204ENST00000467560 GGTLC3B5MD39 225 aa9.98□□□□□ -0.81
ATPAF2-204ENST00000467560 GATA1P15976 413 aaPredicted RBP9.98□□□□□ -0.81
ATPAF2-204ENST00000467560 TCEAL7Q9BRU2 100 aa9.98□□□□□ -0.81
ATPAF2-204ENST00000467560 MAP1LC3BQ9GZQ8 125 aa9.98□□□□□ -0.81
ATPAF2-204ENST00000467560 SDF2L1Q9HCN8 221 aa9.98□□□□□ -0.81
ATPAF2-204ENST00000467560 A0A087WTM6 91 aa9.97□□□□□ -0.81
ATPAF2-204ENST00000467560 C9JCJ5 164 aa9.97□□□□□ -0.81
ATPAF2-204ENST00000467560 ORM1P02763 201 aa9.97□□□□□ -0.81
ATPAF2-204ENST00000467560 H2AFB1P0C5Y9 115 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms