RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 F6UZH7 168 aa12.54□□□□□ -0.4
CGREF1-208ENST00000467539 SMLR1H3BR10 107 aa12.54□□□□□ -0.4
CGREF1-208ENST00000467539 CRYBA4P53673 196 aa12.54□□□□□ -0.4
CGREF1-208ENST00000467539 FLI1Q01543 452 aaPredicted RBP12.54□□□□□ -0.4
CGREF1-208ENST00000467539 CYB561D1Q8N8Q1 229 aa12.54□□□□□ -0.4
CGREF1-208ENST00000467539 NKX6-2Q9C056 277 aaPredicted RBP12.54□□□□□ -0.4
CGREF1-208ENST00000467539 MRPS16Q9Y3D3 137 aaKnown RBP12.54□□□□□ -0.4
CGREF1-208ENST00000467539 HMSDA8MTL9 139 aa12.53□□□□□ -0.4
CGREF1-208ENST00000467539 ZNF80P51504 273 aaPredicted RBP12.53□□□□□ -0.4
CGREF1-208ENST00000467539 SAPCD1Q5SSQ6 148 aa12.53□□□□□ -0.4
CGREF1-208ENST00000467539 KCNRGQ8N5I3 272 aa12.53□□□□□ -0.4
CGREF1-208ENST00000467539 TMEM75Q8N9X5 138 aa12.53□□□□□ -0.4
CGREF1-208ENST00000467539 SDF2L1Q9HCN8 221 aa12.53□□□□□ -0.4
CGREF1-208ENST00000467539 PKD1P98161 4303 aa12.53□□□□□ -0.4
CGREF1-208ENST00000467539 M0R2P5 195 aa12.52□□□□□ -0.41
CGREF1-208ENST00000467539 TYMSP04818 313 aa12.52□□□□□ -0.41
CGREF1-208ENST00000467539 SMUG1Q53HV7 270 aa12.52□□□□□ -0.41
CGREF1-208ENST00000467539 PRNTQ86SH4 94 aa12.52□□□□□ -0.41
CGREF1-208ENST00000467539 C6orf223Q8N319 242 aa12.52□□□□□ -0.41
CGREF1-208ENST00000467539 ZNF479Q96JC4 524 aa12.52□□□□□ -0.41
CGREF1-208ENST00000467539 C8orf49Q96NF6 230 aa12.52□□□□□ -0.41
CGREF1-208ENST00000467539 C11orf21Q9P2W6 132 aa12.52□□□□□ -0.41
CGREF1-208ENST00000467539 ICOSQ9Y6W8 199 aa12.52□□□□□ -0.41
CGREF1-208ENST00000467539 TRGV4A0A0C4DH28 118 aa12.51□□□□□ -0.41
CGREF1-208ENST00000467539 GCGP01275 180 aa12.51□□□□□ -0.41
CGREF1-208ENST00000467539 IFNA7P01567 189 aa12.51□□□□□ -0.41
CGREF1-208ENST00000467539 ZNF345Q14585 488 aa12.51□□□□□ -0.41
CGREF1-208ENST00000467539 MRPL23Q16540 153 aaKnown RBP12.51□□□□□ -0.41
CGREF1-208ENST00000467539 OR11H4Q8NGC9 324 aa12.51□□□□□ -0.41
CGREF1-208ENST00000467539 LINC00479Q96M42 142 aa12.51□□□□□ -0.41
CGREF1-208ENST00000467539 A0A0D9SG52 128 aa12.5□□□□□ -0.41
CGREF1-208ENST00000467539 FAM74A7A6NL05 159 aa12.5□□□□□ -0.41
CGREF1-208ENST00000467539 PFN1P07737 140 aaKnown RBP12.5□□□□□ -0.41
CGREF1-208ENST00000467539 SFTA3P0C7M3 94 aa12.5□□□□□ -0.41
CGREF1-208ENST00000467539 FGF8P55075 233 aaPredicted RBP12.5□□□□□ -0.41
CGREF1-208ENST00000467539 TRAV4A0A0B4J268 109 aa12.49□□□□□ -0.41
CGREF1-208ENST00000467539 A0A1W2PPQ1 181 aa12.49□□□□□ -0.41
CGREF1-208ENST00000467539 SEC11BP0C7V7 166 aa12.49□□□□□ -0.41
CGREF1-208ENST00000467539 UBE2G2P60604 165 aa12.49□□□□□ -0.41
CGREF1-208ENST00000467539 TTC32Q5I0X7 151 aa12.49□□□□□ -0.41
CGREF1-208ENST00000467539 OR4C5Q8NGB2 326 aa12.49□□□□□ -0.41
CGREF1-208ENST00000467539 HIST1H2BAQ96A08 127 aa12.49□□□□□ -0.41
CGREF1-208ENST00000467539 TRAV34A0A0B4J273 112 aa12.48□□□□□ -0.41
CGREF1-208ENST00000467539 MAP1LC3B2A6NCE7 125 aa12.48□□□□□ -0.41
CGREF1-208ENST00000467539 PPT1P50897 306 aa12.48□□□□□ -0.41
CGREF1-208ENST00000467539 ZFP69Q49AA0 526 aa12.48□□□□□ -0.41
CGREF1-208ENST00000467539 LYPD5Q6UWN5 251 aa12.48□□□□□ -0.41
CGREF1-208ENST00000467539 STOML3Q8TAV4 291 aa12.48□□□□□ -0.41
CGREF1-208ENST00000467539 MAP1LC3BQ9GZQ8 125 aa12.48□□□□□ -0.41
CGREF1-208ENST00000467539 FABP5P3A8MUU1 101 aa12.47□□□□□ -0.41
CGREF1-208ENST00000467539 PEX7O00628 323 aa12.47□□□□□ -0.41
CGREF1-208ENST00000467539 BTF3P20290 206 aaKnown RBP12.47□□□□□ -0.41
CGREF1-208ENST00000467539 FHITP49789 147 aa12.47□□□□□ -0.41
CGREF1-208ENST00000467539 NEGR1Q7Z3B1 354 aa12.47□□□□□ -0.41
CGREF1-208ENST00000467539 PTH2Q96A98 100 aa12.47□□□□□ -0.41
CGREF1-208ENST00000467539 UMAD1C9J7I0 102 aa12.46□□□□□ -0.41
CGREF1-208ENST00000467539 CIDEAO60543 219 aa12.46□□□□□ -0.41
CGREF1-208ENST00000467539 ORM1P02763 201 aa12.46□□□□□ -0.41
CGREF1-208ENST00000467539 ZNF876PQ49A33 203 aa12.46□□□□□ -0.41
CGREF1-208ENST00000467539 MBD3L1Q8WWY6 194 aa12.46□□□□□ -0.41
CGREF1-208ENST00000467539 C9orf85Q96MD7 179 aa12.46□□□□□ -0.41
CGREF1-208ENST00000467539 KRTAP1-5Q9BYS1 174 aa12.46□□□□□ -0.41
CGREF1-208ENST00000467539 ARL2-SNX15V9GYD0 113 aa12.46□□□□□ -0.41
CGREF1-208ENST00000467539 PKHD1P08F94 4074 aa12.45□□□□□ -0.42
CGREF1-208ENST00000467539 K7EQD1 137 aa12.45□□□□□ -0.42
CGREF1-208ENST00000467539 SIVA1O15304 175 aa12.45□□□□□ -0.42
CGREF1-208ENST00000467539 TNP2Q05952 138 aa12.45□□□□□ -0.42
CGREF1-208ENST00000467539 COX8CQ7Z4L0 72 aa12.45□□□□□ -0.42
CGREF1-208ENST00000467539 ZFP30Q9Y2G7 519 aa12.45□□□□□ -0.42
CGREF1-208ENST00000467539 C9JCJ5 164 aa12.44□□□□□ -0.42
CGREF1-208ENST00000467539 GYPEP15421 78 aa12.44□□□□□ -0.42
CGREF1-208ENST00000467539 TCEAL7Q9BRU2 100 aa12.44□□□□□ -0.42
CGREF1-208ENST00000467539 ZNF471Q9BX82 626 aaPredicted RBP12.44□□□□□ -0.42
CGREF1-208ENST00000467539 IGKV3D-20A0A0C4DH25 116 aa12.43□□□□□ -0.42
CGREF1-208ENST00000467539 KANTRA0A1W2PQU2 76 aa12.43□□□□□ -0.42
CGREF1-208ENST00000467539 RS1O15537 224 aa12.43□□□□□ -0.42
CGREF1-208ENST00000467539 BCL2L11O43521 198 aa12.43□□□□□ -0.42
CGREF1-208ENST00000467539 NXPH4O95158 308 aa12.43□□□□□ -0.42
CGREF1-208ENST00000467539 RNASE3P12724 160 aaKnown RBP12.43□□□□□ -0.42
CGREF1-208ENST00000467539 GATA1P15976 413 aaPredicted RBP12.43□□□□□ -0.42
CGREF1-208ENST00000467539 SRIP30626 198 aa12.43□□□□□ -0.42
CGREF1-208ENST00000467539 EIF5AP63241 154 aaKnown RBP12.43□□□□□ -0.42
CGREF1-208ENST00000467539 SFT2D1Q8WV19 159 aa12.43□□□□□ -0.42
CGREF1-208ENST00000467539 PCNPQ8WW12 178 aaKnown RBP12.43□□□□□ -0.42
CGREF1-208ENST00000467539 DNAH11Q96DT5 4516 aa12.42□□□□□ -0.42
CGREF1-208ENST00000467539 TRBV6-1A0A0K0K1D8 114 aa12.42□□□□□ -0.42
CGREF1-208ENST00000467539 PGPEP1LA6NFU8 196 aa12.42□□□□□ -0.42
CGREF1-208ENST00000467539 CRIP1P50238 77 aa12.42□□□□□ -0.42
CGREF1-208ENST00000467539 CFAP126Q5VTH2 177 aa12.42□□□□□ -0.42
CGREF1-208ENST00000467539 CST9LP1Q5W188 147 aa12.42□□□□□ -0.42
CGREF1-208ENST00000467539 DPPA3Q6W0C5 159 aa12.42□□□□□ -0.42
CGREF1-208ENST00000467539 TMUB2Q71RG4 321 aa12.42□□□□□ -0.42
CGREF1-208ENST00000467539 FMC1Q96HJ9 113 aa12.42□□□□□ -0.42
CGREF1-208ENST00000467539 TXNDC17Q9BRA2 123 aa12.42□□□□□ -0.42
CGREF1-208ENST00000467539 HERC2O95714 4834 aa12.41□□□□□ -0.42
CGREF1-208ENST00000467539 PIK3CD-AS1Q5SR53 167 aa12.41□□□□□ -0.42
CGREF1-208ENST00000467539 SH2D6Q7Z4S9 175 aa12.41□□□□□ -0.42
CGREF1-208ENST00000467539 Q86TA4 180 aa12.41□□□□□ -0.42
CGREF1-208ENST00000467539 FAM213BQ8TBF2 198 aa12.41□□□□□ -0.42
CGREF1-208ENST00000467539 PAGE4O60829 102 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms