RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SLC25A26Q70HW3 274 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 ARL17AQ8IVW1 177 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 OR8B3Q8NGG8 313 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 TSKUQ8WUA8 353 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 PMCHL2Q9BQD1 86 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 LINC00312Q9Y6C7 94 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 SBF1O95248 1867 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 FANCMQ8IYD8 2048 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 INO80Q9ULG1 1556 aaPredicted RBP2.15□□□□□ -2.07
VPS50-209ENST00000467326 ARHGAP21Q5T5U3 1957 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 TRAV2A0A0B4J234 112 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 TRAV1-1A0A0B4J248 108 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 UBE2L5PA0A1B0GUS4 154 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 LRCOL1A6NCL2 159 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 A6NN06 94 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 OOSP1A8MZH6 123 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 E7EQL1 145 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 GNGT2O14610 69 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 UBL3O95164 117 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 CFDP00746 253 aaPredicted RBP2.14□□□□□ -2.07
VPS50-209ENST00000467326 COX7CP15954 63 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 UBE2L3P68036 154 aaKnown RBP2.14□□□□□ -2.07
VPS50-209ENST00000467326 PMCHL1Q16048 86 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 KRTAP25-1Q3LHN0 102 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 KPRPQ5T749 579 aaPredicted RBP2.14□□□□□ -2.07
VPS50-209ENST00000467326 SPANXN1Q5VSR9 72 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 UNQ5815/PRO19632Q6UWF5 114 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 LSM10Q969L4 123 aaKnown RBP2.14□□□□□ -2.07
VPS50-209ENST00000467326 NDUFB11Q9NX14 153 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 QRICH2Q9H0J4 1663 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 ANKARQ7Z5J8 1434 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 FANCD2Q9BXW9 1451 aa2.14□□□□□ -2.07
VPS50-209ENST00000467326 IGKV1D-42A0A075B6H8 117 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 IGLV4-60A0A075B6I1 120 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 MUC21A0A0G2JKD1 596 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 E7EUB6 86 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 ATOX1O00244 68 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 IGLV1-51P01701 117 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 MIFP14174 115 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 C1orf134Q5TEV5 83 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 HEPN1Q6WQI6 88 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 OR10AG1Q8NH19 301 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 DYNLRB2Q8TF09 96 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 SPCS1Q9Y6A9 102 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 ABCC5O15440 1437 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 TRPM3Q9HCF6 1732 aaPredicted RBP2.13□□□□□ -2.07
VPS50-209ENST00000467326 GOLGA3Q08378 1498 aa2.13□□□□□ -2.07
VPS50-209ENST00000467326 ABCC2Q92887 1545 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 A0A087WSZ3 146 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 A0A087WWC5 75 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 TRAV14DV4A0A0A6YYC5 116 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 A6NIN4 97 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 ERC2-IT1O76042 136 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 MT-ATP8P03928 68 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 ASAH2BP0C7U1 165 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 PIRTP0C851 137 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 SLC25A6P12236 298 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 CBLN1P23435 193 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 SMIM11AP58511 58 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 PSMG4Q5JS54 123 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 RPL7L1Q6DKI1 246 aaKnown RBP2.12□□□□□ -2.07
VPS50-209ENST00000467326 TMEM136Q6ZRR5 245 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 C10orf105Q8TEF2 133 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 PPDPFLQ8WWR9 84 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 C20orf166-AS1Q96NR2 134 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 PSORS1C2Q9UIG4 136 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 MYH7BA7E2Y1 1941 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 PLEKHH2Q8IVE3 1493 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 ARHGAP5Q13017 1502 aa2.12□□□□□ -2.07
VPS50-209ENST00000467326 ANKRD12Q6UB98 2062 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 ATG2AQ2TAZ0 1938 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 ZNF638Q14966 1978 aaKnown RBP2.11□□□□□ -2.07
VPS50-209ENST00000467326 TCRBV4S1A1TA0A5B7 111 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 C5orf67F2Z3F1 127 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 NDUFC1O43677 76 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 IGLC2P0DOY2 106 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 IGLC3P0DOY3 106 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 ADCYAP1P18509 176 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 FAUP35544 74 aaKnown RBP2.11□□□□□ -2.07
VPS50-209ENST00000467326 CCL8P80075 99 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 LY6EQ16553 131 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 SMIM5Q71RC9 77 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 C5orf38Q86SI9 138 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 LINC00269Q8N2A0 174 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 CMTM2Q8TAZ6 248 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 MAGI3Q5TCQ9 1506 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 LMTK2Q8IWU2 1503 aa2.11□□□□□ -2.07
VPS50-209ENST00000467326 ADAMTS12P58397 1594 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 RBBP6Q7Z6E9 1792 aaKnown RBP2.1□□□□□ -2.07
VPS50-209ENST00000467326 EML6Q6ZMW3 1958 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 PSME4Q14997 1843 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 WNK3Q9BYP7 1800 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 TMEM131LA2VDJ0 1609 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 BLMP54132 1417 aaPredicted RBP2.1□□□□□ -2.07
VPS50-209ENST00000467326 POLEQ07864 2286 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 TMSB15BA0A087X1C1 80 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 TRAV10A0A0B4J240 114 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 TRBV7-7A0A0K0K1E9 115 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 A0A1W2PPM0 123 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms