RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 CFAP47Q6ZTR5 3102 aa11.88□□□□□ -0.51
CHD1L-205ENST00000467213 C9orf139Q6ZV77 190 aa11.87□□□□□ -0.51
CHD1L-205ENST00000467213 TEN1Q86WV5 123 aa11.87□□□□□ -0.51
CHD1L-205ENST00000467213 RNF182Q8N6D2 247 aa11.87□□□□□ -0.51
CHD1L-205ENST00000467213 TRAV26-2A0A0B4J265 109 aa11.87□□□□□ -0.51
CHD1L-205ENST00000467213 INSL3P51460 131 aa11.87□□□□□ -0.51
CHD1L-205ENST00000467213 C15orf32Q32M92 178 aa11.87□□□□□ -0.51
CHD1L-205ENST00000467213 APRG1Q8IVJ8 170 aa11.87□□□□□ -0.51
CHD1L-205ENST00000467213 METTL26Q96S19 204 aa11.87□□□□□ -0.51
CHD1L-205ENST00000467213 RNF223E7ERA6 249 aa11.86□□□□□ -0.51
CHD1L-205ENST00000467213 TSPAN13O95857 204 aa11.86□□□□□ -0.51
CHD1L-205ENST00000467213 IGHV3-23P01764 117 aa11.86□□□□□ -0.51
CHD1L-205ENST00000467213 FBXL19-AS1Q494R0 122 aa11.86□□□□□ -0.51
CHD1L-205ENST00000467213 ITLN2Q8WWU7 325 aaPredicted RBP11.86□□□□□ -0.51
CHD1L-205ENST00000467213 LINC01600Q96MT4 127 aa11.86□□□□□ -0.51
CHD1L-205ENST00000467213 LYNX1G3V0Z9 82 aa11.86□□□□□ -0.51
CHD1L-205ENST00000467213 CLEC3BP05452 202 aa11.86□□□□□ -0.51
CHD1L-205ENST00000467213 LYNX1P0DP58 116 aa11.86□□□□□ -0.51
CHD1L-205ENST00000467213 C2orf66Q6UXQ4 117 aa11.86□□□□□ -0.51
CHD1L-205ENST00000467213 ZNF815PA8K554 130 aa11.85□□□□□ -0.51
CHD1L-205ENST00000467213 NXPH4O95158 308 aa11.85□□□□□ -0.51
CHD1L-205ENST00000467213 HERVK_113P61574 105 aa11.85□□□□□ -0.51
CHD1L-205ENST00000467213 SYT8Q8NBV8 401 aa11.85□□□□□ -0.51
CHD1L-205ENST00000467213 PRSS29PA6NIE9 313 aa11.85□□□□□ -0.51
CHD1L-205ENST00000467213 EEF1AKMT3Q96AZ1 226 aa11.85□□□□□ -0.51
CHD1L-205ENST00000467213 IGHV4OR15-8A0A075B7B6 117 aa11.84□□□□□ -0.51
CHD1L-205ENST00000467213 A0A087WW49 117 aa11.84□□□□□ -0.51
CHD1L-205ENST00000467213 TRAV21A0A0B4J279 112 aa11.84□□□□□ -0.51
CHD1L-205ENST00000467213 TMEM262E9PQX1 116 aa11.84□□□□□ -0.51
CHD1L-205ENST00000467213 ATP5G2Q06055 141 aa11.84□□□□□ -0.51
CHD1L-205ENST00000467213 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
CHD1L-205ENST00000467213 NFE4Q86UQ8 179 aa11.84□□□□□ -0.51
CHD1L-205ENST00000467213 NDUFA11Q86Y39 141 aa11.84□□□□□ -0.51
CHD1L-205ENST00000467213 TMEM141Q96I45 108 aa11.84□□□□□ -0.51
CHD1L-205ENST00000467213 Q6ZUT4 128 aa11.84□□□□□ -0.51
CHD1L-205ENST00000467213 CCDC140Q96MF4 163 aa11.84□□□□□ -0.51
CHD1L-205ENST00000467213 VKORC1Q9BQB6 163 aa11.84□□□□□ -0.51
CHD1L-205ENST00000467213 H3BVH4 76 aa11.83□□□□□ -0.52
CHD1L-205ENST00000467213 OVOL1O14753 267 aa11.83□□□□□ -0.52
CHD1L-205ENST00000467213 FAM19A4Q96LR4 140 aa11.83□□□□□ -0.52
CHD1L-205ENST00000467213 BOD1L1Q8NFC6 3051 aa11.83□□□□□ -0.52
CHD1L-205ENST00000467213 A0A0J9YY99 117 aa11.83□□□□□ -0.52
CHD1L-205ENST00000467213 SPINK8P0C7L1 97 aa11.83□□□□□ -0.52
CHD1L-205ENST00000467213 Q8NA96 180 aa11.83□□□□□ -0.52
CHD1L-205ENST00000467213 C11orf86A6NJI1 115 aa11.82□□□□□ -0.52
CHD1L-205ENST00000467213 ASIPP42127 132 aa11.82□□□□□ -0.52
CHD1L-205ENST00000467213 SRSF9Q13242 221 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHD1L-205ENST00000467213 SCGB1D4Q6XE38 83 aa11.82□□□□□ -0.52
CHD1L-205ENST00000467213 DEFB123Q8N688 67 aa11.82□□□□□ -0.52
CHD1L-205ENST00000467213 ZFAND2AQ8N6M9 145 aa11.82□□□□□ -0.52
CHD1L-205ENST00000467213 SLC25A29Q8N8R3 303 aa11.82□□□□□ -0.52
CHD1L-205ENST00000467213 GLMPQ8WWB7 406 aa11.82□□□□□ -0.52
CHD1L-205ENST00000467213 TIMM17AQ99595 171 aa11.82□□□□□ -0.52
CHD1L-205ENST00000467213 CRYGDP07320 174 aa11.81□□□□□ -0.52
CHD1L-205ENST00000467213 GPHB5Q86YW7 130 aa11.81□□□□□ -0.52
CHD1L-205ENST00000467213 IGLV4-69A0A075B6H9 119 aa11.8□□□□□ -0.52
CHD1L-205ENST00000467213 IGIPA6NJ69 53 aa11.8□□□□□ -0.52
CHD1L-205ENST00000467213 C10orf126Q8N4M7 172 aa11.8□□□□□ -0.52
CHD1L-205ENST00000467213 CARD19Q96LW7 228 aa11.8□□□□□ -0.52
CHD1L-205ENST00000467213 A8MWV9 139 aa11.8□□□□□ -0.52
CHD1L-205ENST00000467213 ZZEF1O43149 2961 aa11.8□□□□□ -0.52
CHD1L-205ENST00000467213 IGHV3-30P01768 117 aa11.8□□□□□ -0.52
CHD1L-205ENST00000467213 IGHV3-30-5P0DP03 117 aa11.8□□□□□ -0.52
CHD1L-205ENST00000467213 PSMB2P49721 201 aa11.8□□□□□ -0.52
CHD1L-205ENST00000467213 CRIP2P52943 208 aaPredicted RBP11.8□□□□□ -0.52
CHD1L-205ENST00000467213 PMVKQ15126 192 aa11.8□□□□□ -0.52
CHD1L-205ENST00000467213 PLEKHB2Q96CS7 222 aa11.8□□□□□ -0.52
CHD1L-205ENST00000467213 ERG28Q9UKR5 140 aa11.8□□□□□ -0.52
CHD1L-205ENST00000467213 ZNF688P0C7X2 276 aa11.79□□□□□ -0.52
CHD1L-205ENST00000467213 PRR9Q5T870 116 aa11.79□□□□□ -0.52
CHD1L-205ENST00000467213 NCOR1O75376 2440 aa11.79□□□□□ -0.52
CHD1L-205ENST00000467213 TRAV26-1A0A087WT03 109 aa11.79□□□□□ -0.52
CHD1L-205ENST00000467213 CLUHP3Q96NS8 147 aa11.79□□□□□ -0.52
CHD1L-205ENST00000467213 SIRPDQ9H106 197 aa11.79□□□□□ -0.52
CHD1L-205ENST00000467213 BRI3O95415 125 aa11.79□□□□□ -0.52
CHD1L-205ENST00000467213 C16orf92Q96LL3 132 aa11.79□□□□□ -0.52
CHD1L-205ENST00000467213 FAM223BA6NKX1 122 aa11.78□□□□□ -0.52
CHD1L-205ENST00000467213 FAM223AQ8IWN6 122 aa11.78□□□□□ -0.52
CHD1L-205ENST00000467213 PHLDA3Q9Y5J5 127 aa11.78□□□□□ -0.52
CHD1L-205ENST00000467213 KIF25-AS1Q9Y6Z4 181 aa11.78□□□□□ -0.52
CHD1L-205ENST00000467213 SOCS3O14543 225 aa11.78□□□□□ -0.52
CHD1L-205ENST00000467213 ATP6V0E1O15342 81 aa11.78□□□□□ -0.52
CHD1L-205ENST00000467213 POLR2KP53803 58 aaKnown RBP11.78□□□□□ -0.52
CHD1L-205ENST00000467213 XGP55808 180 aa11.78□□□□□ -0.52
CHD1L-205ENST00000467213 FHL3Q13643 280 aa11.78□□□□□ -0.52
CHD1L-205ENST00000467213 CLEC19AQ6UXS0 136 aa11.78□□□□□ -0.52
CHD1L-205ENST00000467213 OR10J6PQ8NGY7 276 aa11.78□□□□□ -0.52
CHD1L-205ENST00000467213 LOC107984156A0A0G2JMH3 177 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 TCL1BO95988 128 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 C11orf71Q6IPW1 123 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 ZFP2Q6ZN57 461 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 ARL17AQ8IVW1 177 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 RPL39LQ96EH5 51 aaKnown RBP11.77□□□□□ -0.53
CHD1L-205ENST00000467213 TSHBP01222 138 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 MT-ATP8P03928 68 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 CFC1BP0CG36 223 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 CFC1P0CG37 223 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 P0DMU3 169 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 FAM231AP0DMU4 169 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 FAM231CP0DMU5 169 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms