RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CDK6Q00534 326 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 CIRBPQ14011 172 aaKnown RBP1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 OR5AK2Q8NH90 309 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 PP6455Q8WZ26 134 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 MUCL1Q96DR8 90 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 MPC1Q9Y5U8 109 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 MYOM2P54296 1465 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 PTPRFP10586 1907 aa1.34□□□□□ -2.2
CDC42BPA-211ENST00000466538 ZFYVE16Q7Z3T8 1539 aa1.34□□□□□ -2.2
CDC42BPA-211ENST00000466538 RP1P56715 2156 aa1.34□□□□□ -2.2
CDC42BPA-211ENST00000466538 MCM3APO60318 1980 aa1.34□□□□□ -2.2
CDC42BPA-211ENST00000466538 DIDO1Q9BTC0 2240 aaKnown RBP1.34□□□□□ -2.2
CDC42BPA-211ENST00000466538 SIP14410 1827 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 SCRIBQ14160 1630 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 PZPP20742 1482 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 HELZ2Q9BYK8 2649 aaKnown RBP1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 TRAV10A0A0B4J240 114 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 PYYP10082 97 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 GUCA1AP43080 201 aaPredicted RBP1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 C1orf137Q5JT78 98 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 FOXI2Q6ZQN5 318 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 Q6ZUT4 128 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 TMEM254Q8TBM7 123 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 SFT2D1Q8WV19 159 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 SNRNP25Q9BV90 132 aaKnown RBP1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 GNG8Q9UK08 70 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 BOKQ9UMX3 212 aaPredicted RBP1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 ZFP30Q9Y2G7 519 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 MUC22E2RYF6 1773 aaPredicted RBP1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 LAMB1P07942 1786 aa1.33□□□□□ -2.2
CDC42BPA-211ENST00000466538 CFTRP13569 1480 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 PTPRMP28827 1452 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 TRAV12-2A0A075B6T6 113 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 TCRBV4S1A1TA0A5B7 111 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 CDC42EP2O14613 210 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 GEMIN2O14893 280 aaKnown RBP1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 RBP4P02753 201 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 FREM3P0C091 2139 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 PCBD1P61457 104 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 MEIG1Q5JSS6 88 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 MIC13Q5XKP0 118 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 C2orf82Q6UX34 121 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 TCTEX1D1Q8N7M0 179 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 ZNF431Q8TF32 576 aaPredicted RBP1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 LSM10Q969L4 123 aaKnown RBP1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 CCDC167Q9P0B6 97 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 INTS1Q8N201 2190 aaKnown RBP1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 ROBO1Q9Y6N7 1651 aa1.32□□□□□ -2.2
CDC42BPA-211ENST00000466538 PNMA8CA0A1B0GUJ8 204 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 BBIP1A8MTZ0 92 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 ERC2-IT1O76042 136 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 CXCL8P10145 99 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 CKS2P33552 79 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 ETV6P41212 452 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 RBP2P50120 134 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 MIR22HGQ0VDD5 57 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 ATP11AUNQ6ZP68 121 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 CLECL1Q8IZS7 167 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 ATOH7Q8N100 152 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 ATP6V0E2Q8NHE4 81 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 C4orf3Q8WVX3 66 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 PATE1Q8WXA2 126 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 CIB3Q96Q77 187 aaPredicted RBP1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 TCEAL7Q9BRU2 100 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 PSMG3Q9BT73 122 aaPredicted RBP1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 CST11Q9H112 138 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 KLK9Q9UKQ9 250 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 CTTNBP2Q8WZ74 1663 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 MED13Q9UHV7 2174 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 TNRC6BQ9UPQ9 1833 aaKnown RBP1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 CECR2Q9BXF3 1484 aa1.31□□□□□ -2.2
CDC42BPA-211ENST00000466538 SHROOM2Q13796 1616 aa1.3□□□□□ -2.2
CDC42BPA-211ENST00000466538 LOC110117498A0A087WWA1 95 aa1.3□□□□□ -2.2
CDC42BPA-211ENST00000466538 YPEL1O60688 119 aa1.3□□□□□ -2.2
CDC42BPA-211ENST00000466538 MRPS10P82664 201 aaKnown RBP1.3□□□□□ -2.2
CDC42BPA-211ENST00000466538 MRPL57Q9BQC6 102 aaKnown RBP1.3□□□□□ -2.2
CDC42BPA-211ENST00000466538 AGPAT4-IT1Q9H0P7 198 aa1.3□□□□□ -2.2
CDC42BPA-211ENST00000466538 SAR1AQ9NR31 198 aa1.3□□□□□ -2.2
CDC42BPA-211ENST00000466538 PTPRDP23468 1912 aa1.3□□□□□ -2.2
CDC42BPA-211ENST00000466538 HEATR1Q9H583 2144 aaKnown RBP1.3□□□□□ -2.2
CDC42BPA-211ENST00000466538 ADGRB2O60241 1585 aa1.3□□□□□ -2.2
CDC42BPA-211ENST00000466538 IGHV1-24A0A0C4DH33 117 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 LOC107984156A0A0G2JMH3 177 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 C3orf85A0A1B0GTC6 90 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 CCL25O15444 150 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 CD2P06729 351 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 AKAIN1P0CW23 69 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 Q6ZS92 163 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 GKN2Q86XP6 184 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 SNX29P2Q8IUI4 249 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 ARL17AQ8IVW1 177 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 KCNRGQ8N5I3 272 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 SMIM7Q9BQ49 75 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 RERGLQ9H628 205 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 AKAP12Q02952 1782 aa1.29□□□□□ -2.2
CDC42BPA-211ENST00000466538 MYOFQ9NZM1 2061 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 MED12LQ86YW9 2145 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 ARFGEF3Q5TH69 2177 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 ALPK2Q86TB3 2170 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 IFITM5A6NNB3 132 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms