RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 BAGE2Q86Y30 109 aa13.06□□□□□ -0.32
HOXA9-203ENST00000465941 DERL1Q9BUN8 251 aa13.06□□□□□ -0.32
HOXA9-203ENST00000465941 MLST8Q9BVC4 326 aa13.06□□□□□ -0.32
HOXA9-203ENST00000465941 SDF2L1Q9HCN8 221 aa13.06□□□□□ -0.32
HOXA9-203ENST00000465941 MDFICQ9P1T7 246 aa13.06□□□□□ -0.32
HOXA9-203ENST00000465941 C11orf21Q9P2W6 132 aa13.06□□□□□ -0.32
HOXA9-203ENST00000465941 DEFB131BA0A096LNP1 70 aa13.05□□□□□ -0.32
HOXA9-203ENST00000465941 GNRH2O43555 120 aa13.05□□□□□ -0.32
HOXA9-203ENST00000465941 ZNF415Q09FC8 603 aa13.05□□□□□ -0.32
HOXA9-203ENST00000465941 ZNF674Q2M3X9 581 aa13.05□□□□□ -0.32
HOXA9-203ENST00000465941 ZNF506Q5JVG8 444 aa13.05□□□□□ -0.32
HOXA9-203ENST00000465941 IGHV3-16A0A0C4DH30 117 aa13.04□□□□□ -0.32
HOXA9-203ENST00000465941 LGALS9BQ3B8N2 356 aa13.04□□□□□ -0.32
HOXA9-203ENST00000465941 FAM162BQ5T6X4 162 aa13.04□□□□□ -0.32
HOXA9-203ENST00000465941 MED9Q9NWA0 146 aa13.04□□□□□ -0.32
HOXA9-203ENST00000465941 CSMD3Q7Z407 3707 aa13.03□□□□□ -0.32
HOXA9-203ENST00000465941 SPINK4O60575 86 aa13.03□□□□□ -0.32
HOXA9-203ENST00000465941 TYMSP04818 313 aa13.03□□□□□ -0.32
HOXA9-203ENST00000465941 FAM210AQ96ND0 272 aa13.03□□□□□ -0.32
HOXA9-203ENST00000465941 SPXQ9BT56 116 aa13.03□□□□□ -0.32
HOXA9-203ENST00000465941 IGKV3D-20A0A0C4DH25 116 aa13.02□□□□□ -0.33
HOXA9-203ENST00000465941 GAGE12BA1L429 117 aa13.02□□□□□ -0.33
HOXA9-203ENST00000465941 TMEM250H0YL14 139 aa13.02□□□□□ -0.33
HOXA9-203ENST00000465941 SH2D1AO60880 128 aa13.02□□□□□ -0.33
HOXA9-203ENST00000465941 NDUFS6O75380 124 aaKnown RBP13.02□□□□□ -0.33
HOXA9-203ENST00000465941 GAGE7O76087 117 aa13.02□□□□□ -0.33
HOXA9-203ENST00000465941 GAGE12FP0CL80 117 aa13.02□□□□□ -0.33
HOXA9-203ENST00000465941 GAGE12GP0CL81 117 aa13.02□□□□□ -0.33
HOXA9-203ENST00000465941 GAGE12IP0CL82 117 aa13.02□□□□□ -0.33
HOXA9-203ENST00000465941 Q6ZTI0 123 aa13.02□□□□□ -0.33
HOXA9-203ENST00000465941 NHLRC2Q8NBF2 726 aa13.02□□□□□ -0.33
HOXA9-203ENST00000465941 C18orf15Q96N68 181 aa13.02□□□□□ -0.33
HOXA9-203ENST00000465941 ATP5G1P05496 136 aa13.01□□□□□ -0.33
HOXA9-203ENST00000465941 CENPWQ5EE01 88 aa13.01□□□□□ -0.33
HOXA9-203ENST00000465941 PCNPQ8WW12 178 aaKnown RBP13.01□□□□□ -0.33
HOXA9-203ENST00000465941 SMIM12Q96EX1 92 aa13.01□□□□□ -0.33
HOXA9-203ENST00000465941 EIF5A2Q9GZV4 153 aaKnown RBP13.01□□□□□ -0.33
HOXA9-203ENST00000465941 TRGV1A0A0A0MS02 117 aa13□□□□□ -0.33
HOXA9-203ENST00000465941 RAB19A4D1S5 217 aa13□□□□□ -0.33
HOXA9-203ENST00000465941 IGLL5B9A064 214 aa13□□□□□ -0.33
HOXA9-203ENST00000465941 IGLV2-8P01709 118 aa13□□□□□ -0.33
HOXA9-203ENST00000465941 ORM1P02763 201 aa13□□□□□ -0.33
HOXA9-203ENST00000465941 GNG4P50150 75 aa13□□□□□ -0.33
HOXA9-203ENST00000465941 TCTAP57738 103 aa13□□□□□ -0.33
HOXA9-203ENST00000465941 TOR2AQ5JU69 321 aa13□□□□□ -0.33
HOXA9-203ENST00000465941 TRBV20OR9-2A0A075B6H5 130 aa12.99□□□□□ -0.33
HOXA9-203ENST00000465941 B4DEV8 164 aa12.99□□□□□ -0.33
HOXA9-203ENST00000465941 KRBOX1C9JBD0 128 aa12.99□□□□□ -0.33
HOXA9-203ENST00000465941 HTN3P15516 51 aa12.99□□□□□ -0.33
HOXA9-203ENST00000465941 LINC01559Q495D7 138 aa12.99□□□□□ -0.33
HOXA9-203ENST00000465941 RASL10AQ92737 203 aa12.99□□□□□ -0.33
HOXA9-203ENST00000465941 FAM210BQ96KR6 192 aa12.99□□□□□ -0.33
HOXA9-203ENST00000465941 TRGV2A0A075B6R0 118 aa12.98□□□□□ -0.33
HOXA9-203ENST00000465941 M0R2P5 195 aa12.98□□□□□ -0.33
HOXA9-203ENST00000465941 ZNF575Q86XF7 245 aa12.98□□□□□ -0.33
HOXA9-203ENST00000465941 MRPL16Q9NX20 251 aaKnown RBP12.98□□□□□ -0.33
HOXA9-203ENST00000465941 RNASE3P12724 160 aaKnown RBP12.97□□□□□ -0.33
HOXA9-203ENST00000465941 DNLZQ5SXM8 178 aa12.97□□□□□ -0.33
HOXA9-203ENST00000465941 C9orf85Q96MD7 179 aa12.97□□□□□ -0.33
HOXA9-203ENST00000465941 IGHV4-4A0A075B6R2 117 aa12.96□□□□□ -0.33
HOXA9-203ENST00000465941 C9JCJ5 164 aa12.96□□□□□ -0.33
HOXA9-203ENST00000465941 F5H768 121 aa12.96□□□□□ -0.33
HOXA9-203ENST00000465941 M0R036 132 aa12.96□□□□□ -0.33
HOXA9-203ENST00000465941 PARLQ9H300 379 aa12.96□□□□□ -0.33
HOXA9-203ENST00000465941 STARD9Q9P2P6 4700 aa12.95□□□□□ -0.34
HOXA9-203ENST00000465941 MGST1P10620 155 aaKnown RBP12.95□□□□□ -0.34
HOXA9-203ENST00000465941 S100A4P26447 101 aaKnown RBP12.95□□□□□ -0.34
HOXA9-203ENST00000465941 ASIPP42127 132 aa12.95□□□□□ -0.34
HOXA9-203ENST00000465941 PRR27Q6MZM9 219 aa12.95□□□□□ -0.34
HOXA9-203ENST00000465941 PTH2Q96A98 100 aa12.95□□□□□ -0.34
HOXA9-203ENST00000465941 BIN3Q9NQY0 253 aa12.95□□□□□ -0.34
HOXA9-203ENST00000465941 IL36BQ9NZH7 164 aa12.95□□□□□ -0.34
HOXA9-203ENST00000465941 APLNQ9ULZ1 77 aa12.95□□□□□ -0.34
HOXA9-203ENST00000465941 SRP19P09132 144 aaKnown RBP12.94□□□□□ -0.34
HOXA9-203ENST00000465941 RAB14P61106 215 aa12.94□□□□□ -0.34
HOXA9-203ENST00000465941 IFITM2Q01629 132 aa12.94□□□□□ -0.34
HOXA9-203ENST00000465941 NDUFAF3Q9BU61 184 aa12.94□□□□□ -0.34
HOXA9-203ENST00000465941 SMDT1Q9H4I9 107 aa12.94□□□□□ -0.34
HOXA9-203ENST00000465941 TENM2Q9NT68 2774 aa12.93□□□□□ -0.34
HOXA9-203ENST00000465941 C19orf71A6NCJ1 209 aa12.93□□□□□ -0.34
HOXA9-203ENST00000465941 PGPEP1LA6NFU8 196 aa12.93□□□□□ -0.34
HOXA9-203ENST00000465941 HOXA5P20719 270 aa12.93□□□□□ -0.34
HOXA9-203ENST00000465941 PEA15Q15121 130 aa12.93□□□□□ -0.34
HOXA9-203ENST00000465941 ZNF876PQ49A33 203 aa12.93□□□□□ -0.34
HOXA9-203ENST00000465941 TMEM88Q6PEY1 159 aa12.93□□□□□ -0.34
HOXA9-203ENST00000465941 DAZAP1Q96EP5 407 aaKnown RBP12.93□□□□□ -0.34
HOXA9-203ENST00000465941 TMSB15BA0A087X1C1 80 aa12.92□□□□□ -0.34
HOXA9-203ENST00000465941 GRIFINA4D1Z8 144 aa12.92□□□□□ -0.34
HOXA9-203ENST00000465941 CXCL1P09341 107 aa12.92□□□□□ -0.34
HOXA9-203ENST00000465941 CEBPGP53567 150 aa12.92□□□□□ -0.34
HOXA9-203ENST00000465941 OR5I1Q13606 314 aa12.92□□□□□ -0.34
HOXA9-203ENST00000465941 PIK3CD-AS1Q5SR53 167 aa12.92□□□□□ -0.34
HOXA9-203ENST00000465941 OCC1Q8TAD7 63 aa12.92□□□□□ -0.34
HOXA9-203ENST00000465941 ARMS2P0C7Q2 107 aa12.91□□□□□ -0.34
HOXA9-203ENST00000465941 SCRT2Q9NQ03 307 aa12.91□□□□□ -0.34
HOXA9-203ENST00000465941 LY96Q9Y6Y9 160 aa12.91□□□□□ -0.34
HOXA9-203ENST00000465941 TRAV4A0A0B4J268 109 aa12.9□□□□□ -0.34
HOXA9-203ENST00000465941 LCE6AA0A183 80 aa12.9□□□□□ -0.34
HOXA9-203ENST00000465941 C9JQL5 133 aa12.9□□□□□ -0.34
HOXA9-203ENST00000465941 H3BVH4 76 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms