RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 RNASE8Q8TDE3 154 aaKnown RBP3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 TVP23CQ96ET8 276 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 HYLS1Q96M11 299 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 LINC01587Q99440 93 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 TMEM208Q9BTX3 173 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 MRPL32Q9BYC8 188 aaKnown RBP3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 Q9H3A6 140 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 CYTL1Q9NRR1 136 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 TP53TG3Q9ULZ0 132 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 KLK5Q9Y337 293 aaPredicted RBP3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 GOLT1BQ9Y3E0 138 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 TIMM9Q9Y5J7 89 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 MUC4Q99102 2169 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 TRAV8-1A0A0A6YYK1 113 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 A0A0D9SG52 128 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 HMSDA8MTL9 139 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 C11orf94C9JXX5 98 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 ARPC5O15511 151 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 C1QBP02746 253 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 AMBPP02760 352 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 STAG3L2P0CL84 134 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 STAG3L3P0CL85 134 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 SPART-AS1P0CW21 52 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 ARL14EPLP0DKL9 152 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 DEFB130BP0DP73 79 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 DEFB130AP0DP74 79 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 M6PRP20645 277 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 TSPOP30536 169 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 RNASE4P34096 147 aaKnown RBP3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 TAS2R60P59551 318 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 DAD1P61803 113 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 GNG5P63218 68 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 UBE2L3P68036 154 aaKnown RBP3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 LGALS9CQ6DKI2 356 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 C11orf72Q8NBR9 251 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 OR10G4Q8NGN3 311 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 OR10G9Q8NGN4 311 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 OR10G7Q8NGN6 311 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 OR2G3Q8NGZ4 309 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 GNPNAT1Q96EK6 184 aaPredicted RBP3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 MRPL53Q96EL3 112 aaKnown RBP3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 SGK494Q96LW2 274 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 NIPSNAP3BQ9BS92 247 aa3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 NOP10Q9NPE3 64 aaKnown RBP3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 DYNC1H1Q14204 4646 aaKnown RBP3.35□□□□□ -1.87
EXOSC3-204ENST00000465860 C7orf71A4D174 169 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 TMEM189A5PLL7 270 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 PGPA6NDG6 321 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 H7BYZ3 331 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 PAGE4O60829 102 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 MBP02144 154 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 CRISP2P16562 243 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 CDC34P49427 236 aaPredicted RBP3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 FHITP49789 147 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 ACOT6Q3I5F7 207 aaPredicted RBP3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 KHDC3LQ587J8 217 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 EIF5AL1Q6IS14 154 aaKnown RBP3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 Q6ZTI0 123 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 KCNRGQ8N5I3 272 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 LINC00612Q8N6U2 182 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 SUN5Q8TC36 379 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 TMEM263Q8WUH6 116 aaKnown RBP3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 ST6GAL2Q96JF0 529 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 LINC00477Q96M19 166 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 ODF3Q96PU9 254 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 PSMG3Q9BT73 122 aaPredicted RBP3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 GSN-AS1Q9NRJ2 163 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 ZNF492Q9P255 531 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 RPH3ALQ9UNE2 315 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 PRELID1Q9Y255 219 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 KLF12Q9Y4X4 402 aa3.34□□□□□ -1.87
EXOSC3-204ENST00000465860 DNAH5Q8TE73 4624 aa3.34□□□□□ -1.88
EXOSC3-204ENST00000465860 A0A1W2PPV4 95 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 CBY3A6NI87 242 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 LYRM9A8MSI8 78 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 GGTLC3B5MD39 225 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 USP17L23D6RBM5 183 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 F6UZH7 168 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 BCL2L11O43521 198 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 GAGE7O76087 117 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 SLC25A5P05141 298 aaKnown RBP3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 GPX1P07203 203 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 GAGE12FP0CL80 117 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 GAGE12GP0CL81 117 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 GAGE12IP0CL82 117 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 TPT1P13693 172 aaKnown RBP3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 GCHFRP30047 84 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 LEPP41159 167 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 ZNF80P51504 273 aaPredicted RBP3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 ZNF138P52744 262 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 FGF8P55075 233 aaPredicted RBP3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 TAS2R45P59539 299 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 SERF2P84101 59 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 MUC21Q5SSG8 566 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 TMEM78Q5T7P6 136 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 PQLC2Q6ZP29 291 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 GOLT1AQ6ZVE7 132 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 LYPD1Q8N2G4 141 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms