RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TPST1O60507 370 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 IGKCP01834 107 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 NBEAP1P0C6P0 100 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 RHOHQ15669 191 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 ARL17AQ8IVW1 177 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 OR8J3Q8NGG0 315 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 BRK1Q8WUW1 75 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 NDUFAF1Q9Y375 327 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 ANK2Q01484 3957 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 KDM6BO15054 1643 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 RREB1Q92766 1687 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 DLEC1Q9Y238 1755 aa0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 LRP1Q07954 4544 aaKnown RBP0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 MAP2P11137 1827 aaKnown RBP0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 KDM5CP41229 1560 aa0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 A0A0G2JMM0 328 aa0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 A0A1B0GX51 115 aa0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 SLC25A5P05141 298 aaKnown RBP0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 ADCYAP1P18509 176 aa0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 KDELR1P24390 212 aa0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 LSM3P62310 102 aaKnown RBP0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 KLKP1Q107X0 134 aa0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 ZNF56Q15929 161 aa0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 TSKUQ8WUA8 353 aa0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 SMIM7Q9BQ49 75 aa0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 METTL1Q9UBP6 276 aaKnown RBP0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 TANC2Q9HCD6 1990 aa0.04□□□□□ -2.4
NUCKS1-202ENST00000464938 XIRP1Q702N8 1843 aaKnown RBP0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 TRAV36DV7A0A075B6V5 113 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 CXorf51AA0A1B0GTR3 108 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 PNMA8CA0A1B0GUJ8 204 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 J3KT08 172 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 TCRAP04437 139 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 B2MP61769 119 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 HSD17B12Q53GQ0 312 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 IDO2Q6ZQW0 420 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 SMIM15Q7Z3B0 74 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 SKA2Q8WVK7 121 aaPredicted RBP0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 ATG5Q9H1Y0 275 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 TMEM14BQ9NUH8 114 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 GINS2Q9Y248 185 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 MAST4O15021 2626 aa0.03□□□□□ -2.4
NUCKS1-202ENST00000464938 ATG2AQ2TAZ0 1938 aa0.03□□□□□ -2.41
NUCKS1-202ENST00000464938 ESPL1Q14674 2120 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 AFDNP55196 1824 aaKnown RBP0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 TRPM7Q96QT4 1865 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 JMJD1CQ15652 2540 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 IGHV1-24A0A0C4DH33 117 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 TRBV10-1A0A0K0K1A3 114 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 DPM2O94777 84 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 CD3DP04234 171 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 SCTP09683 121 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 IL7P13232 177 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 S100GP29377 79 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 CKS2P33552 79 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 OR8B8Q15620 311 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 SPINK6Q6UWN8 80 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 TMEM91Q6ZNR0 172 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 TMEM35BQ8NCS4 154 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 MYH1P12882 1939 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 UHRF1BP1LA0JNW5 1464 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 PTPRMP28827 1452 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 SYNE2Q8WXH0 6885 aaKnown RBP0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 CACNA1HO95180 2353 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 TPRP12270 2363 aaKnown RBP0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 TTC28Q96AY4 2481 aa0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 TANC1Q9C0D5 1861 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 TSTD3H0UI37 97 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 FXYD1O00168 92 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 OR2H2O95918 312 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 CCKP06307 115 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 NEFHP12036 1026 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 SDC4P31431 198 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 PCBD1P61457 104 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 PLGLB1Q02325 96 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 OR8I2Q8N0Y5 310 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 PPDPFLQ8WWR9 84 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 DNAJC15Q9Y5T4 150 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 ZNF142P52746 1687 aaPredicted RBP0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 RBBP6Q7Z6E9 1792 aaKnown RBP0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 SPAG17Q6Q759 2223 aa0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 TRAV2A0A0B4J234 112 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 TEX49A0A1B0GTD5 131 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 A0A1B0GW64 132 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 GNG14A0A1W2PPG7 69 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 H0YJX3 145 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 PLXNA2O75051 1894 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 TNFSF15O95150 251 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 MT-ND4LP03901 98 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 MPC1LP0DKB6 136 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 HIST1H1BP16401 226 aaKnown RBP0□□□□□ -2.41
NUCKS1-202ENST00000464938 POLR2JP52435 117 aaKnown RBP0□□□□□ -2.41
NUCKS1-202ENST00000464938 PSPHP78330 225 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 CCDC171Q6TFL3 1326 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 SELENOSQ9BQE4 189 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 SLC35B3Q9H1N7 401 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 PROK2Q9HC23 129 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 HSPB11Q9Y547 144 aa0□□□□□ -2.41
NUCKS1-202ENST00000464938 ZFYVE26Q68DK2 2539 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 FSIP2Q5CZC0 6907 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms