RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ADAMTS7Q9UKP4 1686 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 MUC21A0A0G2JKD1 596 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 MUC21A0A140T8X8 626 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 G3V3Q6 166 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 APOC4-APOC2K7ER74 178 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 APOC2P02655 101 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 P0C880 135 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 IFITM1P13164 125 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 ASB16-AS1Q495Z4 193 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 DEFB134Q4QY38 66 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 Q6AWC8 147 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 ARPINQ7Z6K5 226 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 C4orf33Q8N1A6 199 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 SVBPQ8N300 66 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 C9orf62Q8N4C0 152 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 TTC9CQ8N5M4 171 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 C9orf163Q8N9P6 203 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 C10orf105Q8TEF2 133 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 Q96M85 177 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 LHFPL6Q9Y693 200 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 PTPRDP23468 1912 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 ADGRL2O95490 1459 aa2.06□□□□□ -2.08
ITGB1-208ENST00000464001 BAZ1AQ9NRL2 1556 aaPredicted RBP2.06□□□□□ -2.08
ITGB1-208ENST00000464001 CHD1O14646 1710 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 TNRC6AQ8NDV7 1962 aaKnown RBP2.05□□□□□ -2.08
ITGB1-208ENST00000464001 A0A1W2PRS3 328 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 ZNF705FA8MVS1 300 aaPredicted RBP2.05□□□□□ -2.08
ITGB1-208ENST00000464001 J3QLW9 94 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 PROSCO94903 275 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 UBL3O95164 117 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 BAALC-AS2P0C853 105 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 MIFP14174 115 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 DSCR4P56555 118 aaPredicted RBP2.05□□□□□ -2.08
ITGB1-208ENST00000464001 ATP11AUNQ6ZP68 121 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 FOXI2Q6ZQN5 318 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 ZCCHC23Q6ZST2 131 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 OR4X2Q8NGF9 303 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 ATP6V0E2Q8NHE4 81 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 VSTM2AQ8TAG5 236 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 Q8TAT8 98 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 LINC00526Q96FQ7 95 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 DSCR8Q96T75 97 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 Q9BRP9 147 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 ARHGAP5Q13017 1502 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 LAMB1P07942 1786 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 SBF2Q86WG5 1849 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 PCDH15Q96QU1 1955 aa2.05□□□□□ -2.08
ITGB1-208ENST00000464001 IGLV10-54A0A075B6I4 117 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 E7EQL1 145 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 E7EUB6 86 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 MED14O60244 1454 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 SNRNP200O75643 2136 aaKnown RBP2.04□□□□□ -2.08
ITGB1-208ENST00000464001 CTSGP08311 255 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 SIP14410 1827 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 TROQ12816 1431 aaPredicted RBP2.04□□□□□ -2.08
ITGB1-208ENST00000464001 OR2T2Q6IF00 324 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 RGPD4Q7Z3J3 1758 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 TOPAZ1Q8N9V7 1692 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 TMEM254Q8TBM7 123 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 ARAP2Q8WZ64 1704 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 TANC1Q9C0D5 1861 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 PRO2289Q9P1D8 64 aa2.04□□□□□ -2.08
ITGB1-208ENST00000464001 SHANK1Q9Y566 2161 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 CHD3Q12873 2000 aaKnown RBP2.03□□□□□ -2.08
ITGB1-208ENST00000464001 TET3O43151 1660 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 SHROOM2Q13796 1616 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 ADGRB3O60242 1522 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 ADGRL1O94910 1474 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 A0A087WSZ3 146 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 TRAV10A0A0B4J240 114 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 IL5P05113 134 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 ADCYAP1P18509 176 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 CASC2Q6XLA1 102 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 KRTAP13-1Q8IUC0 172 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 SMIM7Q9BQ49 75 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 TMEM242Q9NWH2 141 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 NDUFB11Q9NX14 153 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 PSORS1C2Q9UIG4 136 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 CCL26Q9Y258 94 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 MED12LQ86YW9 2145 aa2.03□□□□□ -2.08
ITGB1-208ENST00000464001 DOCK2Q92608 1830 aa2.03□□□□□ -2.09
ITGB1-208ENST00000464001 LAMB4A4D0S4 1761 aa2.03□□□□□ -2.09
ITGB1-208ENST00000464001 C2orf70A6NJV1 201 aa2.02□□□□□ -2.09
ITGB1-208ENST00000464001 ERC2-IT1O76042 136 aa2.02□□□□□ -2.09
ITGB1-208ENST00000464001 PRB4P10163 310 aaPredicted RBP2.02□□□□□ -2.09
ITGB1-208ENST00000464001 RPL26P61254 145 aaKnown RBP2.02□□□□□ -2.09
ITGB1-208ENST00000464001 NPC2P61916 151 aa2.02□□□□□ -2.09
ITGB1-208ENST00000464001 INSL4Q14641 139 aa2.02□□□□□ -2.09
ITGB1-208ENST00000464001 SLC25A26Q70HW3 274 aa2.02□□□□□ -2.09
ITGB1-208ENST00000464001 CLECL1Q8IZS7 167 aa2.02□□□□□ -2.09
ITGB1-208ENST00000464001 SPTSSAQ969W0 71 aa2.02□□□□□ -2.09
ITGB1-208ENST00000464001 SPANXDQ9BXN6 97 aa2.02□□□□□ -2.09
ITGB1-208ENST00000464001 Q9H521 79 aa2.02□□□□□ -2.09
ITGB1-208ENST00000464001 PCNX2A6NKB5 2137 aa2.02□□□□□ -2.09
ITGB1-208ENST00000464001 FREM3P0C091 2139 aa2.02□□□□□ -2.09
ITGB1-208ENST00000464001 MAGI1Q96QZ7 1491 aaPredicted RBP2.01□□□□□ -2.09
ITGB1-208ENST00000464001 RGPD3A6NKT7 1758 aaPredicted RBP2.01□□□□□ -2.09
ITGB1-208ENST00000464001 MON2Q7Z3U7 1717 aa2.01□□□□□ -2.09
ITGB1-208ENST00000464001 NWD2Q9ULI1 1742 aa2.01□□□□□ -2.09
ITGB1-208ENST00000464001 TRAV12-1A0A0B4J245 112 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms