RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 FAM167A-AS1Q96KT0 104 aa9.52□□□□□ -0.89
SMC1A-204ENST00000463684 ATP5SQ99766 215 aa9.52□□□□□ -0.89
SMC1A-204ENST00000463684 PAXXQ9BUH6 204 aa9.52□□□□□ -0.89
SMC1A-204ENST00000463684 SH3BGRL3Q9H299 93 aa9.52□□□□□ -0.89
SMC1A-204ENST00000463684 TRBV6-4A0A1B0GX49 114 aa9.51□□□□□ -0.89
SMC1A-204ENST00000463684 H3BMQ9 156 aa9.51□□□□□ -0.89
SMC1A-204ENST00000463684 CCSO14618 274 aa9.51□□□□□ -0.89
SMC1A-204ENST00000463684 OR10J4P0C629 311 aa9.51□□□□□ -0.89
SMC1A-204ENST00000463684 RANP62826 216 aaKnown RBP9.51□□□□□ -0.89
SMC1A-204ENST00000463684 ATP6V1FQ16864 119 aa9.51□□□□□ -0.89
SMC1A-204ENST00000463684 MIR17HGQ75NE6 70 aa9.51□□□□□ -0.89
SMC1A-204ENST00000463684 C5orf51A6NDU8 294 aa9.5□□□□□ -0.89
SMC1A-204ENST00000463684 CENPXA8MT69 81 aa9.5□□□□□ -0.89
SMC1A-204ENST00000463684 GGTLC3B5MD39 225 aa9.5□□□□□ -0.89
SMC1A-204ENST00000463684 IGLV2-8P01709 118 aa9.5□□□□□ -0.89
SMC1A-204ENST00000463684 FXYD5Q96DB9 178 aa9.5□□□□□ -0.89
SMC1A-204ENST00000463684 PHYHIPLQ96FC7 376 aa9.5□□□□□ -0.89
SMC1A-204ENST00000463684 NPCDR1Q9BY65 106 aa9.5□□□□□ -0.89
SMC1A-204ENST00000463684 LYRM2Q9NU23 88 aaPredicted RBP9.5□□□□□ -0.89
SMC1A-204ENST00000463684 TRAV21A0A0B4J279 112 aa9.49□□□□□ -0.89
SMC1A-204ENST00000463684 ZNF876PQ49A33 203 aa9.49□□□□□ -0.89
SMC1A-204ENST00000463684 TRIQKQ629K1 86 aa9.49□□□□□ -0.89
SMC1A-204ENST00000463684 DAZ4Q86SG3 579 aaKnown RBP9.49□□□□□ -0.89
SMC1A-204ENST00000463684 TMEM252Q8N6L7 170 aa9.49□□□□□ -0.89
SMC1A-204ENST00000463684 RMI2Q96E14 147 aa9.49□□□□□ -0.89
SMC1A-204ENST00000463684 KCNS1Q96KK3 526 aa9.49□□□□□ -0.89
SMC1A-204ENST00000463684 C11orf1Q9H5F2 150 aa9.49□□□□□ -0.89
SMC1A-204ENST00000463684 SDF2L1Q9HCN8 221 aa9.49□□□□□ -0.89
SMC1A-204ENST00000463684 DAZ3Q9NR90 486 aaKnown RBP9.49□□□□□ -0.89
SMC1A-204ENST00000463684 IGHV3-73A0A0B4J1V6 119 aa9.48□□□□□ -0.89
SMC1A-204ENST00000463684 IGSF23A1L1A6 192 aa9.48□□□□□ -0.89
SMC1A-204ENST00000463684 DIRC3C9JPN6 131 aa9.48□□□□□ -0.89
SMC1A-204ENST00000463684 OR7C2O60412 319 aa9.48□□□□□ -0.89
SMC1A-204ENST00000463684 TYMSP04818 313 aa9.48□□□□□ -0.89
SMC1A-204ENST00000463684 RPL37AP61513 92 aaKnown RBP9.48□□□□□ -0.89
SMC1A-204ENST00000463684 CNPY1Q3B7I2 92 aa9.48□□□□□ -0.89
SMC1A-204ENST00000463684 SPANXN2Q5MJ10 180 aa9.48□□□□□ -0.89
SMC1A-204ENST00000463684 CFAP126Q5VTH2 177 aa9.48□□□□□ -0.89
SMC1A-204ENST00000463684 Q8N3U1 123 aa9.48□□□□□ -0.89
SMC1A-204ENST00000463684 TMED6Q8WW62 240 aa9.48□□□□□ -0.89
SMC1A-204ENST00000463684 RNF222A6NCQ9 220 aa9.47□□□□□ -0.89
SMC1A-204ENST00000463684 S100A10P60903 97 aa9.47□□□□□ -0.89
SMC1A-204ENST00000463684 C2orf50Q96LR7 162 aa9.47□□□□□ -0.89
SMC1A-204ENST00000463684 TRAV8-1A0A0A6YYK1 113 aa9.46□□□□□ -0.9
SMC1A-204ENST00000463684 MGST1P10620 155 aaKnown RBP9.46□□□□□ -0.9
SMC1A-204ENST00000463684 THAP6Q8TBB0 222 aa9.46□□□□□ -0.9
SMC1A-204ENST00000463684 ASB13Q8WXK3 278 aa9.46□□□□□ -0.9
SMC1A-204ENST00000463684 HYLS1Q96M11 299 aa9.46□□□□□ -0.9
SMC1A-204ENST00000463684 IGKV2D-24A0A075B6R9 120 aa9.45□□□□□ -0.9
SMC1A-204ENST00000463684 IGLV2-11P01706 119 aa9.45□□□□□ -0.9
SMC1A-204ENST00000463684 CMTM2Q8TAZ6 248 aa9.45□□□□□ -0.9
SMC1A-204ENST00000463684 NMES1Q9C002 83 aa9.45□□□□□ -0.9
SMC1A-204ENST00000463684 KCNIP2Q9NS61 270 aa9.45□□□□□ -0.9
SMC1A-204ENST00000463684 URGCP-MRPS24S4R325 110 aa9.45□□□□□ -0.9
SMC1A-204ENST00000463684 A0A087WWC5 75 aa9.44□□□□□ -0.9
SMC1A-204ENST00000463684 SEC11BP0C7V7 166 aa9.44□□□□□ -0.9
SMC1A-204ENST00000463684 BTCP35070 178 aa9.44□□□□□ -0.9
SMC1A-204ENST00000463684 UBE2L3P68036 154 aaKnown RBP9.44□□□□□ -0.9
SMC1A-204ENST00000463684 DPPA3Q6W0C5 159 aa9.44□□□□□ -0.9
SMC1A-204ENST00000463684 TREM1Q9NP99 234 aa9.44□□□□□ -0.9
SMC1A-204ENST00000463684 RPH3ALQ9UNE2 315 aa9.44□□□□□ -0.9
SMC1A-204ENST00000463684 F6UZH7 168 aa9.43□□□□□ -0.9
SMC1A-204ENST00000463684 RAB32Q13637 225 aa9.43□□□□□ -0.9
SMC1A-204ENST00000463684 FAM74A1Q5RGS3 127 aa9.43□□□□□ -0.9
SMC1A-204ENST00000463684 DAZAP1Q96EP5 407 aaKnown RBP9.43□□□□□ -0.9
SMC1A-204ENST00000463684 PGPA6NDG6 321 aa9.42□□□□□ -0.9
SMC1A-204ENST00000463684 GAGE12JA6NER3 117 aa9.42□□□□□ -0.9
SMC1A-204ENST00000463684 C17orf112F2Z3M2 114 aa9.42□□□□□ -0.9
SMC1A-204ENST00000463684 NHLH2Q02577 135 aa9.42□□□□□ -0.9
SMC1A-204ENST00000463684 GAGE1Q13065 139 aa9.42□□□□□ -0.9
SMC1A-204ENST00000463684 GAGE4Q13068 117 aa9.42□□□□□ -0.9
SMC1A-204ENST00000463684 GAGE5Q13069 117 aa9.42□□□□□ -0.9
SMC1A-204ENST00000463684 GAGE13Q4V321 117 aa9.42□□□□□ -0.9
SMC1A-204ENST00000463684 OR5C1Q8NGR4 320 aa9.42□□□□□ -0.9
SMC1A-204ENST00000463684 OTORQ9NRC9 128 aa9.42□□□□□ -0.9
SMC1A-204ENST00000463684 HNRNPA3P51991 378 aaKnown RBP9.41□□□□□ -0.9
SMC1A-204ENST00000463684 TAS2R45P59539 299 aa9.41□□□□□ -0.9
SMC1A-204ENST00000463684 C14orf177Q52M58 125 aa9.41□□□□□ -0.9
SMC1A-204ENST00000463684 KHDC3LQ587J8 217 aa9.41□□□□□ -0.9
SMC1A-204ENST00000463684 GOLT1AQ6ZVE7 132 aa9.41□□□□□ -0.9
SMC1A-204ENST00000463684 CYB561D1Q8N8Q1 229 aa9.41□□□□□ -0.9
SMC1A-204ENST00000463684 PGPEP1LA6NFU8 196 aa9.4□□□□□ -0.9
SMC1A-204ENST00000463684 CCDC160A6NGH7 325 aa9.4□□□□□ -0.9
SMC1A-204ENST00000463684 FGF8P55075 233 aaPredicted RBP9.4□□□□□ -0.9
SMC1A-204ENST00000463684 IL15RAQ13261 267 aa9.4□□□□□ -0.9
SMC1A-204ENST00000463684 ZNF506Q5JVG8 444 aa9.4□□□□□ -0.9
SMC1A-204ENST00000463684 PTH2Q96A98 100 aa9.4□□□□□ -0.9
SMC1A-204ENST00000463684 TVP23CQ96ET8 276 aa9.4□□□□□ -0.9
SMC1A-204ENST00000463684 SEC22CQ9BRL7 303 aa9.4□□□□□ -0.9
SMC1A-204ENST00000463684 NDFIP1Q9BT67 221 aa9.4□□□□□ -0.9
SMC1A-204ENST00000463684 WDR61Q9GZS3 305 aaKnown RBP9.4□□□□□ -0.9
SMC1A-204ENST00000463684 KLK12Q9UKR0 248 aa9.4□□□□□ -0.9
SMC1A-204ENST00000463684 TAAR5O14804 337 aa9.39□□□□□ -0.91
SMC1A-204ENST00000463684 ELOBQ15370 118 aa9.39□□□□□ -0.91
SMC1A-204ENST00000463684 KCNIP4Q6PIL6 250 aa9.39□□□□□ -0.91
SMC1A-204ENST00000463684 ZFP2Q6ZN57 461 aa9.39□□□□□ -0.91
SMC1A-204ENST00000463684 ARL6IP6Q8N6S5 226 aa9.39□□□□□ -0.91
SMC1A-204ENST00000463684 OR10G9Q8NGN4 311 aa9.39□□□□□ -0.91
SMC1A-204ENST00000463684 UBE2WQ96B02 151 aa9.39□□□□□ -0.91
SMC1A-204ENST00000463684 DNAJC30Q96LL9 226 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms