RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 SNAI2O43623 268 aa7.62□□□□□ -1.19
MSH5-211ENST00000463144 ID1P41134 155 aa7.62□□□□□ -1.19
MSH5-211ENST00000463144 SLURP1P55000 103 aa7.62□□□□□ -1.19
MSH5-211ENST00000463144 ORMDL3Q8N138 153 aa7.62□□□□□ -1.19
MSH5-211ENST00000463144 C14orf144Q96I85 54 aa7.62□□□□□ -1.19
MSH5-211ENST00000463144 FOXC2Q99958 501 aa7.62□□□□□ -1.19
MSH5-211ENST00000463144 TRAV21A0A0B4J279 112 aa7.62□□□□□ -1.19
MSH5-211ENST00000463144 NCR2O95944 276 aa7.62□□□□□ -1.19
MSH5-211ENST00000463144 OR5AL1P0C617 328 aa7.62□□□□□ -1.19
MSH5-211ENST00000463144 RNASE4P34096 147 aaKnown RBP7.62□□□□□ -1.19
MSH5-211ENST00000463144 IFI27P40305 119 aaPredicted RBP7.62□□□□□ -1.19
MSH5-211ENST00000463144 SIGLEC8Q9NYZ4 499 aa7.62□□□□□ -1.19
MSH5-211ENST00000463144 SONP18583 2426 aaKnown RBP7.61□□□□□ -1.19
MSH5-211ENST00000463144 UNC79Q9P2D8 2635 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 HECTD1Q9ULT8 2610 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 TRBV7-9A0A0J9YWB2 115 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 LOC389332A0A1B0GUA5 103 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 SPRY2O43597 315 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 NPYP01303 97 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 ZNF688P0C7X2 276 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 CKS2P33552 79 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 TEX29Q8N6K0 151 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 PRSS3P2Q8NHM4 247 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 WFDC12Q8WWY7 111 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 DUX3Q96PT4 197 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 PAM16Q9Y3D7 125 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 IGHV4-4A0A075B6R2 117 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 H3BVH4 76 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 CD5LO43866 347 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 BTF3P20290 206 aaKnown RBP7.61□□□□□ -1.19
MSH5-211ENST00000463144 EVI2AP22794 236 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 DEFA6Q01524 100 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 ANXA2RQ3ZCQ2 193 aa7.61□□□□□ -1.19
MSH5-211ENST00000463144 A0A096LNJ9 63 aa7.6□□□□□ -1.19
MSH5-211ENST00000463144 KLLNB2CW77 178 aa7.6□□□□□ -1.19
MSH5-211ENST00000463144 LEPROTL1O95214 131 aa7.6□□□□□ -1.19
MSH5-211ENST00000463144 PSMG4Q5JS54 123 aa7.6□□□□□ -1.19
MSH5-211ENST00000463144 SAMD13Q5VXD3 122 aa7.6□□□□□ -1.19
MSH5-211ENST00000463144 OR11H1Q8NG94 326 aa7.6□□□□□ -1.19
MSH5-211ENST00000463144 C20orf144Q9BQM9 153 aa7.6□□□□□ -1.19
MSH5-211ENST00000463144 VAMP8Q9BV40 100 aa7.6□□□□□ -1.19
MSH5-211ENST00000463144 YAE1D1Q9NRH1 226 aa7.6□□□□□ -1.19
MSH5-211ENST00000463144 AP5S1Q9NUS5 200 aa7.6□□□□□ -1.19
MSH5-211ENST00000463144 GNRH2O43555 120 aa7.59□□□□□ -1.19
MSH5-211ENST00000463144 GATA1P15976 413 aaPredicted RBP7.59□□□□□ -1.19
MSH5-211ENST00000463144 ATOH7Q8N100 152 aa7.59□□□□□ -1.19
MSH5-211ENST00000463144 C4orf3Q8WVX3 66 aa7.59□□□□□ -1.19
MSH5-211ENST00000463144 NDUFAF3Q9BU61 184 aa7.59□□□□□ -1.19
MSH5-211ENST00000463144 A0A0J9YX75 114 aa7.59□□□□□ -1.19
MSH5-211ENST00000463144 LINC01619G3V211 115 aa7.59□□□□□ -1.19
MSH5-211ENST00000463144 FA2HQ7L5A8 372 aa7.59□□□□□ -1.19
MSH5-211ENST00000463144 TMEM70Q9BUB7 260 aa7.59□□□□□ -1.19
MSH5-211ENST00000463144 TIMM8BQ9Y5J9 83 aaPredicted RBP7.59□□□□□ -1.19
MSH5-211ENST00000463144 NF1P21359 2839 aa7.59□□□□□ -1.2
MSH5-211ENST00000463144 SYS1-DBNDD2H3BUS1 97 aa7.58□□□□□ -1.2
MSH5-211ENST00000463144 CRXO43186 299 aaPredicted RBP7.58□□□□□ -1.2
MSH5-211ENST00000463144 MAJINQ3KP22 176 aa7.58□□□□□ -1.2
MSH5-211ENST00000463144 SPANXN1Q5VSR9 72 aa7.58□□□□□ -1.2
MSH5-211ENST00000463144 OR1N2Q8NGR9 330 aa7.58□□□□□ -1.2
MSH5-211ENST00000463144 ZMAT5Q9UDW3 170 aaKnown RBP7.58□□□□□ -1.2
MSH5-211ENST00000463144 TCF21O43680 179 aa7.58□□□□□ -1.2
MSH5-211ENST00000463144 RNASE3P12724 160 aaKnown RBP7.58□□□□□ -1.2
MSH5-211ENST00000463144 SNRPD3P62318 126 aaKnown RBP7.58□□□□□ -1.2
MSH5-211ENST00000463144 CACNG7P62955 275 aa7.58□□□□□ -1.2
MSH5-211ENST00000463144 DLX4Q92988 240 aaPredicted RBP7.58□□□□□ -1.2
MSH5-211ENST00000463144 SCRT2Q9NQ03 307 aa7.58□□□□□ -1.2
MSH5-211ENST00000463144 AGRNO00468 2067 aa7.58□□□□□ -1.2
MSH5-211ENST00000463144 ACANP16112 2415 aa7.58□□□□□ -1.2
MSH5-211ENST00000463144 MYO9AB2RTY4 2548 aa7.58□□□□□ -1.2
MSH5-211ENST00000463144 TNFRSF6BO95407 300 aa7.57□□□□□ -1.2
MSH5-211ENST00000463144 IGKV3-20P01619 116 aa7.57□□□□□ -1.2
MSH5-211ENST00000463144 PPBPP02775 128 aa7.57□□□□□ -1.2
MSH5-211ENST00000463144 ASIPP42127 132 aa7.57□□□□□ -1.2
MSH5-211ENST00000463144 FXYD7P58549 80 aa7.57□□□□□ -1.2
MSH5-211ENST00000463144 KHDC1LQ5JSQ8 128 aa7.57□□□□□ -1.2
MSH5-211ENST00000463144 KLHL30-AS1Q8NEE0 82 aa7.57□□□□□ -1.2
MSH5-211ENST00000463144 SPATA45Q537H7 98 aa7.57□□□□□ -1.2
MSH5-211ENST00000463144 DPF1Q92782 380 aa7.57□□□□□ -1.2
MSH5-211ENST00000463144 MCRIP2Q9BUT9 160 aaKnown RBP7.57□□□□□ -1.2
MSH5-211ENST00000463144 ZNF747Q9BV97 191 aa7.57□□□□□ -1.2
MSH5-211ENST00000463144 TRAV26-2A0A0B4J265 109 aa7.56□□□□□ -1.2
MSH5-211ENST00000463144 TRAV12-3A0A0B4J271 114 aa7.56□□□□□ -1.2
MSH5-211ENST00000463144 M0R381 172 aa7.56□□□□□ -1.2
MSH5-211ENST00000463144 MED14OSP0DP75 135 aa7.56□□□□□ -1.2
MSH5-211ENST00000463144 S100A4P26447 101 aaKnown RBP7.56□□□□□ -1.2
MSH5-211ENST00000463144 NRACQ8N912 160 aa7.56□□□□□ -1.2
MSH5-211ENST00000463144 OR9G4Q8NGQ1 327 aa7.56□□□□□ -1.2
MSH5-211ENST00000463144 ODF3Q96PU9 254 aa7.56□□□□□ -1.2
MSH5-211ENST00000463144 MUC4Q99102 2169 aa7.56□□□□□ -1.2
MSH5-211ENST00000463144 TRAV12-2A0A075B6T6 113 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 C7orf71A4D174 169 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 FOSL1P15407 271 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 C11orf44Q8N8P7 122 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 SMR3AQ99954 134 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 MIEN1Q9BRT3 115 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 MAP1LC3AQ9H492 121 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 HSPB8Q9UJY1 196 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 SORL1Q92673 2214 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 IGLV2-18A0A075B6J9 118 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 LINC01546A6NGU7 62 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms