RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 HIST1H1TP22492 207 aaPredicted RBP0.1□□□□□ -2.39
KDM3A-208ENST00000463013 CCL7P80098 99 aa0.1□□□□□ -2.39
KDM3A-208ENST00000463013 SPCS2Q15005 226 aa0.1□□□□□ -2.39
KDM3A-208ENST00000463013 KRTAP19-2Q3LHN2 52 aa0.1□□□□□ -2.39
KDM3A-208ENST00000463013 KRTAP20-2Q3LI61 65 aa0.1□□□□□ -2.39
KDM3A-208ENST00000463013 SPRNQ5BIV9 151 aa0.1□□□□□ -2.39
KDM3A-208ENST00000463013 Q6ZS92 163 aa0.1□□□□□ -2.39
KDM3A-208ENST00000463013 TMEM86BQ8N661 226 aa0.1□□□□□ -2.39
KDM3A-208ENST00000463013 OR52E6Q96RD3 313 aa0.1□□□□□ -2.39
KDM3A-208ENST00000463013 OSTCQ9NRP0 149 aa0.1□□□□□ -2.39
KDM3A-208ENST00000463013 TMEM56-RWDD3S4R434 201 aa0.1□□□□□ -2.39
KDM3A-208ENST00000463013 SYNE1Q8NF91 8797 aaKnown RBP0.09□□□□□ -2.39
KDM3A-208ENST00000463013 TANC2Q9HCD6 1990 aa0.09□□□□□ -2.39
KDM3A-208ENST00000463013 CLPSL1A2RUU4 121 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 NUPR2A6NF83 97 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 DEFB108AA8MXU0 73 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 M0R2T5 61 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 PSMD12O00232 456 aaPredicted RBP0.09□□□□□ -2.4
KDM3A-208ENST00000463013 TGOLN2O43493 480 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 DNAL4O96015 105 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 IFNA14P01570 189 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 MT1FP04733 61 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 APODP05090 189 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 SMIM10L2AP0DMW4 78 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 SMIM10L2BP0DMW5 78 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 PSME3P61289 254 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 HIST3H3Q16695 136 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 DEFB133Q30KQ1 61 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 PDZD9Q8IXQ8 264 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 CLECL1Q8IZS7 167 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 ANKRD29Q8N6D5 301 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 OR4S1Q8NGB4 309 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 OR52R1Q8NGF1 315 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 CT55Q8WUE5 264 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 PPP1R14BQ96C90 147 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 NABP2Q9BQ15 211 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 DDA1Q9BW61 102 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 CENPHQ9H3R5 247 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 CCDC171Q6TFL3 1326 aa0.09□□□□□ -2.4
KDM3A-208ENST00000463013 A6NN06 94 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 OR2J2O76002 312 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 MT2AP02795 61 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 RPL5P46777 297 aaKnown RBP0.08□□□□□ -2.4
KDM3A-208ENST00000463013 SPCS3P61009 180 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 RBM3P98179 157 aaKnown RBP0.08□□□□□ -2.4
KDM3A-208ENST00000463013 C1orf134Q5TEV5 83 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 ZCCHC23Q6ZST2 131 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 TRAPPC6BQ86SZ2 158 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 PTH2Q96A98 100 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 PPP1R2P1Q96PQ5 205 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 BPESC1Q9GZL8 116 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 OR51V1Q9H2C8 321 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 TCEAL2Q9H3H9 227 aaPredicted RBP0.08□□□□□ -2.4
KDM3A-208ENST00000463013 NIT2Q9NQR4 276 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 PLAC8Q9NZF1 115 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 EPDR1Q9UM22 224 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 GINS2Q9Y248 185 aa0.08□□□□□ -2.4
KDM3A-208ENST00000463013 TCHHQ07283 1943 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 TRAV17A0A0B4J275 112 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 C10orf142B7Z368 130 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 IFNA6P05013 189 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 CALB1P05937 261 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 CD79AP11912 226 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 CRYGSP22914 178 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 S100A4P26447 101 aaKnown RBP0.07□□□□□ -2.4
KDM3A-208ENST00000463013 ARPP19P56211 112 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 RPS20P60866 119 aaKnown RBP0.07□□□□□ -2.4
KDM3A-208ENST00000463013 RPL37AP61513 92 aaKnown RBP0.07□□□□□ -2.4
KDM3A-208ENST00000463013 FAM74A1Q5RGS3 127 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 LINC00322Q6ZN03 302 aaPredicted RBP0.07□□□□□ -2.4
KDM3A-208ENST00000463013 LCA10Q71F78 164 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 NDUFA11Q86Y39 141 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 KRTAP8-1Q8IUC2 63 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 WFDC9Q8NEX5 89 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 TEX47Q8TBZ9 253 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 TSPAN32Q96QS1 320 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 C20orf27Q9GZN8 174 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 DCSTAMPQ9H295 470 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 APLNQ9ULZ1 77 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 PKIGQ9Y2B9 76 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 ATP6V1DQ9Y5K8 247 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 V9GYY5 206 aaPredicted RBP0.07□□□□□ -2.4
KDM3A-208ENST00000463013 NINQ8N4C6 2090 aa0.07□□□□□ -2.4
KDM3A-208ENST00000463013 ROCK2O75116 1388 aaKnown RBP0.06□□□□□ -2.4
KDM3A-208ENST00000463013 SPTY2D1-AS1A0A0U1RR47 76 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 TRBV6-4A0A1B0GX49 114 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 C7orf71A4D174 169 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 OR2T8A6NH00 312 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 ARL5CA6NH57 179 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 B4DSR2 109 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 KLF7O75840 302 aaPredicted RBP0.06□□□□□ -2.4
KDM3A-208ENST00000463013 IFNA5P01569 189 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 TNNC2P02585 160 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 UQCRHP07919 91 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 OR4E1P0C645 316 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 OR2F1Q13607 317 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 ESRGQ1W209 222 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 DEFB112Q30KQ8 113 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 LINC01554Q52M75 96 aa0.06□□□□□ -2.4
KDM3A-208ENST00000463013 BRMS1LQ5PSV4 323 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 1811.4 ms