RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CFDP00746 253 aaPredicted RBP2.99□□□□□ -1.93
COPS3-204ENST00000462236 PRB4P10163 310 aaPredicted RBP2.99□□□□□ -1.93
COPS3-204ENST00000462236 HLA-DMAP28067 261 aa2.99□□□□□ -1.93
COPS3-204ENST00000462236 SDC2P34741 201 aa2.99□□□□□ -1.93
COPS3-204ENST00000462236 TCL1AP56279 114 aa2.99□□□□□ -1.93
COPS3-204ENST00000462236 PIGPP57054 158 aa2.99□□□□□ -1.93
COPS3-204ENST00000462236 RPL37AP61513 92 aaKnown RBP2.99□□□□□ -1.93
COPS3-204ENST00000462236 HIST1H1AQ02539 215 aaPredicted RBP2.99□□□□□ -1.93
COPS3-204ENST00000462236 SLAQ13239 276 aa2.99□□□□□ -1.93
COPS3-204ENST00000462236 KCNIP4Q6PIL6 250 aa2.99□□□□□ -1.93
COPS3-204ENST00000462236 ARL6IP6Q8N6S5 226 aa2.99□□□□□ -1.93
COPS3-204ENST00000462236 ZNF738Q8NE65 137 aa2.99□□□□□ -1.93
COPS3-204ENST00000462236 ZNF431Q8TF32 576 aaPredicted RBP2.99□□□□□ -1.93
COPS3-204ENST00000462236 ODF3Q96PU9 254 aa2.99□□□□□ -1.93
COPS3-204ENST00000462236 PARD6GQ9BYG4 376 aaPredicted RBP2.99□□□□□ -1.93
COPS3-204ENST00000462236 TMEM222Q9H0R3 208 aa2.99□□□□□ -1.93
COPS3-204ENST00000462236 SLC25A22Q9H936 323 aa2.99□□□□□ -1.93
COPS3-204ENST00000462236 FUT9Q9Y231 359 aa2.99□□□□□ -1.93
COPS3-204ENST00000462236 RCL1Q9Y2P8 373 aaKnown RBP2.99□□□□□ -1.93
COPS3-204ENST00000462236 TRGV2A0A075B6R0 118 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 LINC00854A0A1B0GVQ3 168 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 PCP4L1A6NKN8 68 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 RCVRNP35243 200 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 RPL13AP40429 203 aaKnown RBP2.98□□□□□ -1.93
COPS3-204ENST00000462236 ATP5IP56385 69 aaPredicted RBP2.98□□□□□ -1.93
COPS3-204ENST00000462236 PLP1P60201 277 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 RHOBP62745 196 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 ACOT6Q3I5F7 207 aaPredicted RBP2.98□□□□□ -1.93
COPS3-204ENST00000462236 SP6Q3SY56 376 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 IBA57Q5T440 356 aaKnown RBP2.98□□□□□ -1.93
COPS3-204ENST00000462236 SELENOHQ8IZQ5 122 aaKnown RBP2.98□□□□□ -1.93
COPS3-204ENST00000462236 ZNF680Q8NEM1 530 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 RBPMSQ93062 196 aaKnown RBP2.98□□□□□ -1.93
COPS3-204ENST00000462236 RPUSD4Q96CM3 377 aaKnown RBP2.98□□□□□ -1.93
COPS3-204ENST00000462236 FAM19A4Q96LR4 140 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 SHANK2-AS3Q9BTD1 123 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 ZNF331Q9NQX6 463 aaPredicted RBP2.98□□□□□ -1.93
COPS3-204ENST00000462236 EXTL2Q9UBQ6 330 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 HHLA3Q9XRX5 114 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 KLF12Q9Y4X4 402 aa2.98□□□□□ -1.93
COPS3-204ENST00000462236 TRGV1A0A0A0MS02 117 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 CEBPZOSA8MTT3 80 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 FABP1P07148 127 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 RPL7P18124 248 aaKnown RBP2.97□□□□□ -1.93
COPS3-204ENST00000462236 CXCL2P19875 107 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 SRIP30626 198 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 PRSS3P35030 304 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 TSPAN5P62079 268 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 ZNF846Q147U1 533 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 UBE2NLQ5JXB2 153 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 GPR107Q5VW38 600 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 LGI3Q8N145 548 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 OR10G4Q8NGN3 311 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 BLNKQ8WV28 456 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 PPP1R14BQ96C90 147 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 LINC01600Q96MT4 127 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 C20orf85Q9H1P6 137 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 CACFD1Q9UGQ2 172 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 TMEM56-RWDD3S4R434 201 aa2.97□□□□□ -1.93
COPS3-204ENST00000462236 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.96□□□□□ -1.94
COPS3-204ENST00000462236 TRAV12-3A0A0B4J271 114 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 ZNF861PO60384 105 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 PITX3O75364 302 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 IGHV3-53P01767 116 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 ORM1P02763 201 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 CAV2P51636 162 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 KRTAP10-8P60410 259 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 MXD1Q05195 221 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 FGL1Q08830 312 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 EIF4E3Q8N5X7 224 aaKnown RBP2.96□□□□□ -1.94
COPS3-204ENST00000462236 BPIFCQ8NFQ6 507 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 OR13C8Q8NGS7 320 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 DTD1Q8TEA8 209 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 S100A16Q96FQ6 103 aaKnown RBP2.96□□□□□ -1.94
COPS3-204ENST00000462236 RTBDNQ9BSG5 229 aaPredicted RBP2.96□□□□□ -1.94
COPS3-204ENST00000462236 RBKSQ9H477 322 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 DAZ3Q9NR90 486 aaKnown RBP2.96□□□□□ -1.94
COPS3-204ENST00000462236 SSR3Q9UNL2 185 aa2.96□□□□□ -1.94
COPS3-204ENST00000462236 C7orf71A4D174 169 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 KRTAP4-16G5E9R7 235 aaPredicted RBP2.95□□□□□ -1.94
COPS3-204ENST00000462236 GABARAPH6UMI1 98 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 PANO1I0J062 215 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 SLC17A3O00476 420 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 LECT2O14960 151 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 CCNKO75909 580 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 GABARAPO95166 117 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 SLC25A5P05141 298 aaKnown RBP2.95□□□□□ -1.94
COPS3-204ENST00000462236 SFTA3P0C7M3 94 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 SULT1A3P0DMM9 295 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 SULT1A4P0DMN0 295 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 CRISP2P16562 243 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 ORM2P19652 201 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 AQP4P55087 323 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 TAS2R19P59542 299 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 SELENOTP62341 195 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 CIRBPQ14011 172 aaKnown RBP2.95□□□□□ -1.94
COPS3-204ENST00000462236 LCN15Q6UWW0 184 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 PATE2Q6UY27 113 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 C20orf203Q8NBC4 194 aa2.95□□□□□ -1.94
COPS3-204ENST00000462236 OR1S1Q8NH92 325 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms