RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 NRN1Q9NPD7 142 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 RPH3ALQ9UNE2 315 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 TBL2Q9Y4P3 447 aaKnown RBP2.89□□□□□ -1.95
CFHR3-204ENST00000461558 SOX21Q9Y651 276 aaPredicted RBP2.89□□□□□ -1.95
CFHR3-204ENST00000461558 MINOS1-NBL1R4GNA1 71 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 RIF1Q5UIP0 2472 aaKnown RBP2.88□□□□□ -1.95
CFHR3-204ENST00000461558 TRAV8-1A0A0A6YYK1 113 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 IGHV7-81A0A0B4J1V7 117 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 IGHV2-70DA0A0C4DH43 119 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 A0A1W2PRD5 423 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 A0A1W2PRF3 423 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 A0A1W2PRM7 423 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 P01737 135 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 IGHG4P01861 327 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 IL4P05112 153 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 PMCHP20382 165 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 FCGR2BP31994 310 aaPredicted RBP2.88□□□□□ -1.95
CFHR3-204ENST00000461558 CRIP1P50238 77 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 HBBP68871 147 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 PSG3Q16557 428 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 KLF17Q5JT82 389 aaPredicted RBP2.88□□□□□ -1.95
CFHR3-204ENST00000461558 EBLN2Q6P2I7 272 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 TOMM20LQ6UXN7 152 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 GOLT1AQ6ZVE7 132 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 SPATA12Q7Z6I5 190 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 PRNTQ86SH4 94 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 MRPL52Q86TS9 123 aaKnown RBP2.88□□□□□ -1.95
CFHR3-204ENST00000461558 BPIFA4PQ86YQ2 179 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 FAM19A2Q8N3H0 131 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 Q8N9W7 124 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 OR4F17Q8NGA8 305 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 ITLN2Q8WWU7 325 aaPredicted RBP2.88□□□□□ -1.95
CFHR3-204ENST00000461558 ARPC1AQ92747 370 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 ZC2HC1AQ96GY0 325 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 PGLYRP4Q96LB8 373 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 MIEN1Q9BRT3 115 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 SAMD10Q9BYL1 202 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 PRORYQ9H606 182 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 PSG8Q9UQ74 426 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 RNF24Q9Y225 148 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 ZFP30Q9Y2G7 519 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 S4R3C0 116 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 TLN1Q9Y490 2541 aaKnown RBP2.88□□□□□ -1.95
CFHR3-204ENST00000461558 TACC2O95359 2948 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 ABCA2Q9BZC7 2435 aa2.88□□□□□ -1.95
CFHR3-204ENST00000461558 RP1L1Q8IWN7 2480 aaPredicted RBP2.87□□□□□ -1.95
CFHR3-204ENST00000461558 DCHS1Q96JQ0 3298 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 LOC102724200A0A096LPH7 203 aaPredicted RBP2.87□□□□□ -1.95
CFHR3-204ENST00000461558 C2orf70A6NJV1 201 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 K7EQD1 137 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 M0R143 59 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 GNG7O60262 68 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 LY6G6DO95868 133 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 CTSGP08311 255 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 UBE2E1P51965 193 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 EFNA4P52798 201 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 KRTDAPP60985 99 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 NUTF2P61970 127 aaKnown RBP2.87□□□□□ -1.95
CFHR3-204ENST00000461558 PDE6HQ13956 83 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 HES1Q14469 280 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 FAM106AQ4KMX7 169 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 ARL6IP6Q8N6S5 226 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 OR2D3Q8NGH3 330 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 TXN2Q99757 166 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 NDFIP1Q9BT67 221 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 VAMP8Q9BV40 100 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 C21orf62Q9NYP8 219 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 ADGRG4Q8IZF6 3080 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 ITPR1Q14643 2758 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 CEP295Q9C0D2 2601 aa2.87□□□□□ -1.95
CFHR3-204ENST00000461558 ANKHD1Q8IWZ3 2542 aaKnown RBP2.86□□□□□ -1.95
CFHR3-204ENST00000461558 A0A0U1RRA0 63 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 A0A1B0GW15 77 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 SERTM2A0A1B0GWG4 89 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 CLPSL1A2RUU4 121 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 NCBP2LA6PVI3 153 aaKnown RBP2.86□□□□□ -1.95
CFHR3-204ENST00000461558 H0Y9J4 135 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 C19orf84I3L1E1 186 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 M0R2Z0 102 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 M0R3E3 92 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 CRXO43186 299 aaPredicted RBP2.86□□□□□ -1.95
CFHR3-204ENST00000461558 SH2D1AO60880 128 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 IGHV3-23P01764 117 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 ARMS2P0C7Q2 107 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 IGLC3P0DOY3 106 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 PRB4P10163 310 aaPredicted RBP2.86□□□□□ -1.95
CFHR3-204ENST00000461558 NTF3P20783 257 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 HNRNPA3P51991 378 aaKnown RBP2.86□□□□□ -1.95
CFHR3-204ENST00000461558 SSTP61278 116 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 HERV-K104P63124 156 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 SPATA45Q537H7 98 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 Q56UQ5 140 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 FAM162BQ5T6X4 162 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 CYB5R2Q6BCY4 276 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 RNASEKQ6P5S7 137 aaKnown RBP2.86□□□□□ -1.95
CFHR3-204ENST00000461558 REG3GQ6UW15 175 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 CD164L2Q6UWJ8 174 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 ZNF493Q6ZR52 646 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 LINC00173Q6ZV60 143 aa2.86□□□□□ -1.95
CFHR3-204ENST00000461558 S100A7AQ86SG5 101 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms