RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 TRPM1Q7Z4N2 1603 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 ESPL1Q14674 2120 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 COL24A1Q17RW2 1714 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 TRAV17A0A0B4J275 112 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 A0A1W2PRS3 328 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 C20orf202A1L168 122 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 J3QLW9 94 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 GEMIN2O14893 280 aaKnown RBP0.79□□□□□ -2.28
SYPL1-203ENST00000460770 CCL16O15467 120 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 DNAL4O96015 105 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 PIPP12273 146 aaPredicted RBP0.79□□□□□ -2.28
SYPL1-203ENST00000460770 RNASE3P12724 160 aaKnown RBP0.79□□□□□ -2.28
SYPL1-203ENST00000460770 COX7CP15954 63 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 HIST1H1DP16402 221 aaKnown RBP0.79□□□□□ -2.28
SYPL1-203ENST00000460770 UNQ5815/PRO19632Q6UWF5 114 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 ATP11AUNQ6ZP68 121 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 FOXI2Q6ZQN5 318 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 ZNF833PQ6ZTB9 187 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 LINC00269Q8N2A0 174 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.79□□□□□ -2.28
SYPL1-203ENST00000460770 PLPP5Q8NEB5 264 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 ATP6V0E2Q8NHE4 81 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 LINC00052Q96N35 136 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 SEC11CQ9BY50 192 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 TMEM14CQ9P0S9 112 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 BOKQ9UMX3 212 aaPredicted RBP0.79□□□□□ -2.28
SYPL1-203ENST00000460770 LSM2Q9Y333 95 aaKnown RBP0.79□□□□□ -2.28
SYPL1-203ENST00000460770 ATG2AQ2TAZ0 1938 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 KDM6AO15550 1401 aaPredicted RBP0.79□□□□□ -2.28
SYPL1-203ENST00000460770 TCOF1Q13428 1488 aaKnown RBP0.79□□□□□ -2.28
SYPL1-203ENST00000460770 FRMPD1Q5SYB0 1578 aa0.79□□□□□ -2.28
SYPL1-203ENST00000460770 COL4A5P29400 1685 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 KIF13AQ9H1H9 1805 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 TNRC6BQ9UPQ9 1833 aaKnown RBP0.78□□□□□ -2.28
SYPL1-203ENST00000460770 TRAV23DV6A0A075B6W5 121 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 ATP6V1G2-DDX39BF2Z307 99 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 M0R2P5 195 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 CORTO00230 105 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 MRPS14O60783 128 aaKnown RBP0.78□□□□□ -2.28
SYPL1-203ENST00000460770 APODP05090 189 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 IL5P05113 134 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 IL7P13232 177 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 CCL4P13236 92 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 POLR2JP52435 117 aaKnown RBP0.78□□□□□ -2.28
SYPL1-203ENST00000460770 RHOHQ15669 191 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 IQCJQ1A5X6 159 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 ASB16-AS1Q495Z4 193 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 OCIAD2Q56VL3 154 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 MIC13Q5XKP0 118 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 OR2T2Q6IF00 324 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.78□□□□□ -2.28
SYPL1-203ENST00000460770 GTF2H5Q6ZYL4 71 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 SLC25A26Q70HW3 274 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 FAM19A2Q8N3H0 131 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 ZNF563Q8TA94 476 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 DYNLRB2Q8TF09 96 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 SPTSSAQ969W0 71 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 DPH3Q96FX2 82 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 C12orf57Q99622 126 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 SPANXDQ9BXN6 97 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 WFDC10AQ9H1F0 79 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 MED9Q9NWA0 146 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 SCN3BQ9NY72 215 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 TAS2R8Q9NYW2 309 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 ZFP30Q9Y2G7 519 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 TECTAO75443 2155 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 ASCC3Q8N3C0 2202 aaKnown RBP0.78□□□□□ -2.28
SYPL1-203ENST00000460770 RFX7Q2KHR2 1363 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 TNS3Q68CZ2 1445 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 NISCHQ9Y2I1 1504 aa0.78□□□□□ -2.28
SYPL1-203ENST00000460770 SYNJ1O43426 1573 aa0.78□□□□□ -2.29
SYPL1-203ENST00000460770 VWDEQ8N2E2 1590 aa0.78□□□□□ -2.29
SYPL1-203ENST00000460770 TRAV12-2A0A075B6T6 113 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 IGLV3-32A0A0A0MS00 114 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 TRBV6-7A0A0A0MS04 114 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 IGKV3D-7A0A0C4DH55 119 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 IGKV3OR2-268A0A0C4DH90 116 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 TRBV6-4A0A1B0GX49 114 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 TMEM30CPA0ZSE6 113 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 APOC4-APOC2K7ER74 178 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 CCL25O15444 150 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 NUPR1O60356 82 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 KLF7O75840 302 aaPredicted RBP0.77□□□□□ -2.29
SYPL1-203ENST00000460770 NDUFB6O95139 128 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 IGF2P01344 180 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 APOC2P02655 101 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 PIRTP0C851 137 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 PRB4P10163 310 aaPredicted RBP0.77□□□□□ -2.29
SYPL1-203ENST00000460770 ADCYAP1P18509 176 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 GNG4P50150 75 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 TPPP2P59282 170 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 MPV17LQ2QL34 196 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 MRPL54Q6P161 138 aaKnown RBP0.77□□□□□ -2.29
SYPL1-203ENST00000460770 ZCCHC23Q6ZST2 131 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 Q6ZUT4 128 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 SVBPQ8N300 66 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 PATE1Q8WXA2 126 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 PP6455Q8WZ26 134 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 SDF2Q99470 211 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 NAA60Q9H7X0 242 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms