RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 MUC21Q5SSG8 566 aa16.05■□□□□ 0.16
C9orf3-209ENST00000460573 BAGE2Q86Y30 109 aa16.05■□□□□ 0.16
C9orf3-209ENST00000460573 TRGV11A0A075B6L2 103 aa16.04■□□□□ 0.16
C9orf3-209ENST00000460573 TMEM250H0YL14 139 aa16.04■□□□□ 0.16
C9orf3-209ENST00000460573 EIF5A2Q9GZV4 153 aaKnown RBP16.04■□□□□ 0.16
C9orf3-209ENST00000460573 DAZ2Q13117 558 aaKnown RBP16.03■□□□□ 0.16
C9orf3-209ENST00000460573 C12orf74Q32Q52 190 aa16.03■□□□□ 0.16
C9orf3-209ENST00000460573 C11orf72Q8NBR9 251 aa16.03■□□□□ 0.16
C9orf3-209ENST00000460573 ZC2HC1AQ96GY0 325 aa16.03■□□□□ 0.16
C9orf3-209ENST00000460573 DERL1Q9BUN8 251 aa16.03■□□□□ 0.16
C9orf3-209ENST00000460573 MLST8Q9BVC4 326 aa16.03■□□□□ 0.16
C9orf3-209ENST00000460573 SDF2L1Q9HCN8 221 aa16.03■□□□□ 0.16
C9orf3-209ENST00000460573 NAGKQ9UJ70 344 aa16.03■□□□□ 0.16
C9orf3-209ENST00000460573 KRBOX1C9JBD0 128 aa16.02■□□□□ 0.16
C9orf3-209ENST00000460573 TCL1AP56279 114 aa16.02■□□□□ 0.16
C9orf3-209ENST00000460573 TOR2AQ5JU69 321 aa16.02■□□□□ 0.16
C9orf3-209ENST00000460573 FAM162BQ5T6X4 162 aa16.02■□□□□ 0.16
C9orf3-209ENST00000460573 SMIM12Q96EX1 92 aa16.02■□□□□ 0.16
C9orf3-209ENST00000460573 NOP10Q9NPE3 64 aaKnown RBP16.02■□□□□ 0.16
C9orf3-209ENST00000460573 GSN-AS1Q9NRJ2 163 aa16.02■□□□□ 0.16
C9orf3-209ENST00000460573 TP53TG3Q9ULZ0 132 aa16.02■□□□□ 0.16
C9orf3-209ENST00000460573 DAD1P61803 113 aa16.01■□□□□ 0.15
C9orf3-209ENST00000460573 ZNF415Q09FC8 603 aa16.01■□□□□ 0.15
C9orf3-209ENST00000460573 ZNF674Q2M3X9 581 aa16.01■□□□□ 0.15
C9orf3-209ENST00000460573 STARD9Q9P2P6 4700 aa16.01■□□□□ 0.15
C9orf3-209ENST00000460573 NUPR2A6NF83 97 aa16■□□□□ 0.15
C9orf3-209ENST00000460573 GNG4P50150 75 aa16■□□□□ 0.15
C9orf3-209ENST00000460573 PHLDA1Q8WV24 401 aaPredicted RBP16■□□□□ 0.15
C9orf3-209ENST00000460573 CRIP1P50238 77 aa15.99■□□□□ 0.15
C9orf3-209ENST00000460573 CENPWQ5EE01 88 aa15.99■□□□□ 0.15
C9orf3-209ENST00000460573 Q6ZTC4 211 aa15.99■□□□□ 0.15
C9orf3-209ENST00000460573 SPXQ9BT56 116 aa15.99■□□□□ 0.15
C9orf3-209ENST00000460573 TRAV10A0A0B4J240 114 aa15.98■□□□□ 0.15
C9orf3-209ENST00000460573 GNRH2O43555 120 aa15.98■□□□□ 0.15
C9orf3-209ENST00000460573 TYMSP04818 313 aa15.98■□□□□ 0.15
C9orf3-209ENST00000460573 NHLRC2Q8NBF2 726 aa15.98■□□□□ 0.15
C9orf3-209ENST00000460573 C11orf21Q9P2W6 132 aa15.98■□□□□ 0.15
C9orf3-209ENST00000460573 CSMD3Q7Z407 3707 aa15.97■□□□□ 0.15
C9orf3-209ENST00000460573 SH2D1AO60880 128 aa15.97■□□□□ 0.15
C9orf3-209ENST00000460573 LGALS9BQ3B8N2 356 aa15.97■□□□□ 0.15
C9orf3-209ENST00000460573 CEMP1Q6PRD7 247 aaPredicted RBP15.97■□□□□ 0.15
C9orf3-209ENST00000460573 LINC00612Q8N6U2 182 aa15.97■□□□□ 0.15
C9orf3-209ENST00000460573 BIN3Q9NQY0 253 aa15.97■□□□□ 0.15
C9orf3-209ENST00000460573 MDFICQ9P1T7 246 aa15.97■□□□□ 0.15
C9orf3-209ENST00000460573 IGHV3-16A0A0C4DH30 117 aa15.96■□□□□ 0.15
C9orf3-209ENST00000460573 TMEM218A2RU14 115 aa15.96■□□□□ 0.15
C9orf3-209ENST00000460573 C9JCJ5 164 aa15.96■□□□□ 0.15
C9orf3-209ENST00000460573 ORM1P02763 201 aa15.96■□□□□ 0.15
C9orf3-209ENST00000460573 DEFB130BP0DP73 79 aa15.96■□□□□ 0.15
C9orf3-209ENST00000460573 DEFB130AP0DP74 79 aa15.96■□□□□ 0.15
C9orf3-209ENST00000460573 PARLQ9H300 379 aa15.96■□□□□ 0.15
C9orf3-209ENST00000460573 KLK5Q9Y337 293 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-209ENST00000460573 RYR2Q92736 4967 aa15.96■□□□□ 0.15
C9orf3-209ENST00000460573 DYNC2H1Q8NCM8 4307 aaKnown RBP15.95■□□□□ 0.14
C9orf3-209ENST00000460573 IGKV3D-20A0A0C4DH25 116 aa15.95■□□□□ 0.14
C9orf3-209ENST00000460573 SPINK4O60575 86 aa15.95■□□□□ 0.14
C9orf3-209ENST00000460573 IGLV2-8P01709 118 aa15.95■□□□□ 0.14
C9orf3-209ENST00000460573 LINC01559Q495D7 138 aa15.95■□□□□ 0.14
C9orf3-209ENST00000460573 TRBV20OR9-2A0A075B6H5 130 aa15.94■□□□□ 0.14
C9orf3-209ENST00000460573 B4DEV8 164 aa15.94■□□□□ 0.14
C9orf3-209ENST00000460573 SRP19P09132 144 aaKnown RBP15.94■□□□□ 0.14
C9orf3-209ENST00000460573 DEFB131BA0A096LNP1 70 aa15.93■□□□□ 0.14
C9orf3-209ENST00000460573 MGST1P10620 155 aaKnown RBP15.93■□□□□ 0.14
C9orf3-209ENST00000460573 C18orf15Q96N68 181 aa15.93■□□□□ 0.14
C9orf3-209ENST00000460573 LYSTQ99698 3801 aa15.92■□□□□ 0.14
C9orf3-209ENST00000460573 TRGV1A0A0A0MS02 117 aa15.92■□□□□ 0.14
C9orf3-209ENST00000460573 GAGE12BA1L429 117 aa15.92■□□□□ 0.14
C9orf3-209ENST00000460573 GAGE7O76087 117 aa15.92■□□□□ 0.14
C9orf3-209ENST00000460573 LY6G6CO95867 125 aa15.92■□□□□ 0.14
C9orf3-209ENST00000460573 ATP5G1P05496 136 aa15.92■□□□□ 0.14
C9orf3-209ENST00000460573 GAGE12FP0CL80 117 aa15.92■□□□□ 0.14
C9orf3-209ENST00000460573 GAGE12GP0CL81 117 aa15.92■□□□□ 0.14
C9orf3-209ENST00000460573 GAGE12IP0CL82 117 aa15.92■□□□□ 0.14
C9orf3-209ENST00000460573 SRSF3P84103 164 aaKnown RBP15.92■□□□□ 0.14
C9orf3-209ENST00000460573 DNLZQ5SXM8 178 aa15.92■□□□□ 0.14
C9orf3-209ENST00000460573 PRR27Q6MZM9 219 aa15.92■□□□□ 0.14
C9orf3-209ENST00000460573 Q6ZTI0 123 aa15.92■□□□□ 0.14
C9orf3-209ENST00000460573 S100A4P26447 101 aaKnown RBP15.91■□□□□ 0.14
C9orf3-209ENST00000460573 ASIPP42127 132 aa15.91■□□□□ 0.14
C9orf3-209ENST00000460573 CEBPGP53567 150 aa15.91■□□□□ 0.14
C9orf3-209ENST00000460573 RASL10AQ92737 203 aa15.91■□□□□ 0.14
C9orf3-209ENST00000460573 DAZAP1Q96EP5 407 aaKnown RBP15.91■□□□□ 0.14
C9orf3-209ENST00000460573 SEC11CQ9BY50 192 aa15.91■□□□□ 0.14
C9orf3-209ENST00000460573 M0R036 132 aa15.9■□□□□ 0.14
C9orf3-209ENST00000460573 M0R2P5 195 aa15.9■□□□□ 0.14
C9orf3-209ENST00000460573 C9orf85Q96MD7 179 aa15.9■□□□□ 0.14
C9orf3-209ENST00000460573 LY96Q9Y6Y9 160 aa15.9■□□□□ 0.14
C9orf3-209ENST00000460573 TRGV2A0A075B6R0 118 aa15.89■□□□□ 0.13
C9orf3-209ENST00000460573 TCTAP57738 103 aa15.89■□□□□ 0.13
C9orf3-209ENST00000460573 OR5I1Q13606 314 aa15.89■□□□□ 0.13
C9orf3-209ENST00000460573 C10orf91Q5T1B1 145 aa15.89■□□□□ 0.13
C9orf3-209ENST00000460573 FAM210BQ96KR6 192 aa15.89■□□□□ 0.13
C9orf3-209ENST00000460573 SMIM7Q9BQ49 75 aa15.89■□□□□ 0.13
C9orf3-209ENST00000460573 PGPEP1LA6NFU8 196 aa15.88■□□□□ 0.13
C9orf3-209ENST00000460573 CXCL1P09341 107 aa15.88■□□□□ 0.13
C9orf3-209ENST00000460573 SFTA3P0C7M3 94 aa15.88■□□□□ 0.13
C9orf3-209ENST00000460573 RNASE3P12724 160 aaKnown RBP15.88■□□□□ 0.13
C9orf3-209ENST00000460573 FAM74A3Q4VXF1 159 aa15.88■□□□□ 0.13
C9orf3-209ENST00000460573 OCC1Q8TAD7 63 aa15.88■□□□□ 0.13
C9orf3-209ENST00000460573 PTH2Q96A98 100 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms