RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 IBA57-AS1B1ANH7 110 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 B4DSR2 109 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 C17orf112F2Z3M2 114 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 H3BQ85 93 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 ATOX1O00244 68 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 AGRNO00468 2067 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 IGKCP01834 107 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 ZNF22P17026 224 aaPredicted RBP2.55□□□□□ -2
HMGB3P30-201ENST00000457863 RPS10P46783 165 aaKnown RBP2.55□□□□□ -2
HMGB3P30-201ENST00000457863 POLR2JP52435 117 aaKnown RBP2.55□□□□□ -2
HMGB3P30-201ENST00000457863 FXYD2P54710 66 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 ROMO1P60602 79 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 SEC11AP67812 179 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 ESRGQ1W209 222 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 MALRD1Q5VYJ5 2156 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 ANKARQ7Z5J8 1434 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 UBR1Q8IWV7 1749 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 SHANK3Q9BYB0 1731 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 TANC1Q9C0D5 1861 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 ST20Q9HBF5 79 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 TNS1Q9HBL0 1735 aaKnown RBP2.55□□□□□ -2
HMGB3P30-201ENST00000457863 MUC4Q99102 2169 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 SCN3AQ9NY46 2000 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 LCTP09848 1927 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 SLX4Q8IY92 1834 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 LAMB1P07942 1786 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 CLTCQ00610 1675 aaKnown RBP2.54□□□□□ -2
HMGB3P30-201ENST00000457863 MADDQ8WXG6 1647 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 hADV29S1A0JD25 119 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 TMEM235A6NFC5 223 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 H3BRM9 83 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 PANO1I0J062 215 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 CFDP00746 253 aaPredicted RBP2.54□□□□□ -2
HMGB3P30-201ENST00000457863 PIRTP0C851 137 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 IGLC2P0DOY2 106 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 IGLC3P0DOY3 106 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 PIPP12273 146 aaPredicted RBP2.54□□□□□ -2
HMGB3P30-201ENST00000457863 HINT1P49773 126 aaPredicted RBP2.54□□□□□ -2
HMGB3P30-201ENST00000457863 ZNF117Q03924 483 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 Q5W150 140 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 COMMD6Q7Z4G1 85 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 FAM19A2Q8N3H0 131 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 TYMSOSQ8TAI1 123 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 ZNF431Q8TF32 576 aaPredicted RBP2.54□□□□□ -2
HMGB3P30-201ENST00000457863 Q96M85 177 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 RNF5Q99942 180 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 FAM215AQ9Y5M1 114 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 KIAA1549Q9HCM3 1950 aa2.54□□□□□ -2
HMGB3P30-201ENST00000457863 MAP2P11137 1827 aaKnown RBP2.54□□□□□ -2
HMGB3P30-201ENST00000457863 PCNX2A6NKB5 2137 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 NUP214P35658 2090 aaPredicted RBP2.53□□□□□ -2
HMGB3P30-201ENST00000457863 COL1A2P08123 1366 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 EML5Q05BV3 1969 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 ZNF705FA8MVS1 300 aaPredicted RBP2.53□□□□□ -2
HMGB3P30-201ENST00000457863 H3BPC8 53 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 DEFA4P12838 97 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 GNGT1P63211 74 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 ADIRFQ15847 76 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 HIGD2BQ4VC39 106 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 SPANXN1Q5VSR9 72 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 LYZL1Q6UWQ5 148 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 SLC25A26Q70HW3 274 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 PPDPFLQ8WWR9 84 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 AMELYQ99218 206 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 TIMM9Q9Y5J7 89 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 SPCS1Q9Y6A9 102 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 TRPM7Q96QT4 1865 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 KIAA1549LQ6ZVL6 1849 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 KDM3BQ7LBC6 1761 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 KIF1AQ12756 1690 aa2.53□□□□□ -2
HMGB3P30-201ENST00000457863 TIAM1Q13009 1591 aa2.53□□□□□ -2.01
HMGB3P30-201ENST00000457863 GOLGA3Q08378 1498 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 CDK12Q9NYV4 1490 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 BTAF1O14981 1849 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 SCN4AP35499 1836 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 RGPD2P0DJD1 1756 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 IGKV1D-17A0A075B6S4 117 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 A0A096LNJ9 63 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 H7C2G1 150 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 M0R233 179 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 CCKP06307 115 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 IGLV3-21P80748 117 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 RHOHQ15669 191 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 NNATQ16517 81 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 DEFB116Q30KQ4 102 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 Q6ZQT0 140 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 Q6ZR03 302 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 Q6ZR54 194 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 LINC00269Q8N2A0 174 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 OR10AG1Q8NH19 301 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 IMMP1LQ96LU5 166 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 SMIM7Q9BQ49 75 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 RAPGEF6Q8TEU7 1601 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 PTPRMP28827 1452 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 NRXN1Q9ULB1 1477 aa2.52□□□□□ -2.01
HMGB3P30-201ENST00000457863 RGPD8O14715 1765 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 RGPD5Q99666 1765 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 ARFGEF2Q9Y6D5 1785 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms