RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 TEX48A0A1B0GUV7 120 aa12.78□□□□□ -0.36
FAM239A-203ENST00000456563 SPART-AS1P0CW21 52 aa12.78□□□□□ -0.36
FAM239A-203ENST00000456563 IL17DQ8TAD2 202 aa12.78□□□□□ -0.36
FAM239A-203ENST00000456563 C11orf45Q8TAV5 145 aa12.78□□□□□ -0.36
FAM239A-203ENST00000456563 DKK2Q9UBU2 259 aa12.78□□□□□ -0.36
FAM239A-203ENST00000456563 CELA1Q9UNI1 258 aa12.78□□□□□ -0.36
FAM239A-203ENST00000456563 TIMM8BQ9Y5J9 83 aaPredicted RBP12.78□□□□□ -0.36
FAM239A-203ENST00000456563 TGP01266 2768 aa12.78□□□□□ -0.36
FAM239A-203ENST00000456563 IGKV3D-20A0A0C4DH25 116 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 CXorf65A6NEN9 183 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 PGPEP1LA6NFU8 196 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 LYRM9A8MSI8 78 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 SNURFLB1AK76 121 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 GNRH2O43555 120 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 TYMSP04818 313 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 TCL1AP56279 114 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 DAZ2Q13117 558 aaKnown RBP12.77□□□□□ -0.37
FAM239A-203ENST00000456563 FAM222AQ5U5X8 452 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 SMIM7Q9BQ49 75 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 BIN3Q9NQY0 253 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 GSN-AS1Q9NRJ2 163 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 LY96Q9Y6Y9 160 aa12.77□□□□□ -0.37
FAM239A-203ENST00000456563 IGHV3-16A0A0C4DH30 117 aa12.76□□□□□ -0.37
FAM239A-203ENST00000456563 ZNF727A8MUV8 499 aa12.76□□□□□ -0.37
FAM239A-203ENST00000456563 ORM1P02763 201 aa12.76□□□□□ -0.37
FAM239A-203ENST00000456563 MGST1P10620 155 aaKnown RBP12.76□□□□□ -0.37
FAM239A-203ENST00000456563 ZNF415Q09FC8 603 aa12.76□□□□□ -0.37
FAM239A-203ENST00000456563 LINC01559Q495D7 138 aa12.76□□□□□ -0.37
FAM239A-203ENST00000456563 FAM74A3Q4VXF1 159 aa12.76□□□□□ -0.37
FAM239A-203ENST00000456563 OCC1Q8TAD7 63 aa12.76□□□□□ -0.37
FAM239A-203ENST00000456563 NOP10Q9NPE3 64 aaKnown RBP12.76□□□□□ -0.37
FAM239A-203ENST00000456563 MDFICQ9P1T7 246 aa12.76□□□□□ -0.37
FAM239A-203ENST00000456563 STAB2Q8WWQ8 2551 aa12.76□□□□□ -0.37
FAM239A-203ENST00000456563 KRBOX1C9JBD0 128 aa12.75□□□□□ -0.37
FAM239A-203ENST00000456563 PRR27Q6MZM9 219 aa12.75□□□□□ -0.37
FAM239A-203ENST00000456563 C19orf71A6NCJ1 209 aa12.74□□□□□ -0.37
FAM239A-203ENST00000456563 B4DEV8 164 aa12.74□□□□□ -0.37
FAM239A-203ENST00000456563 K7EN84 100 aa12.73□□□□□ -0.37
FAM239A-203ENST00000456563 M0R036 132 aa12.73□□□□□ -0.37
FAM239A-203ENST00000456563 NANOS2P60321 138 aaKnown RBP12.73□□□□□ -0.37
FAM239A-203ENST00000456563 C12orf74Q32Q52 190 aa12.73□□□□□ -0.37
FAM239A-203ENST00000456563 DNLZQ5SXM8 178 aa12.73□□□□□ -0.37
FAM239A-203ENST00000456563 ZNF575Q86XF7 245 aa12.73□□□□□ -0.37
FAM239A-203ENST00000456563 LINC00612Q8N6U2 182 aa12.73□□□□□ -0.37
FAM239A-203ENST00000456563 DAZAP1Q96EP5 407 aaKnown RBP12.73□□□□□ -0.37
FAM239A-203ENST00000456563 SPXQ9BT56 116 aa12.73□□□□□ -0.37
FAM239A-203ENST00000456563 LINC00862A6NCI5 91 aa12.72□□□□□ -0.37
FAM239A-203ENST00000456563 OR5I1Q13606 314 aa12.72□□□□□ -0.37
FAM239A-203ENST00000456563 SOHLH1Q5JUK2 328 aa12.72□□□□□ -0.37
FAM239A-203ENST00000456563 UQCC3Q6UW78 93 aa12.72□□□□□ -0.37
FAM239A-203ENST00000456563 MUC7Q8TAX7 377 aa12.72□□□□□ -0.37
FAM239A-203ENST00000456563 SPINK4O60575 86 aa12.71□□□□□ -0.37
FAM239A-203ENST00000456563 CXCL1P09341 107 aa12.71□□□□□ -0.37
FAM239A-203ENST00000456563 RNASE3P12724 160 aaKnown RBP12.71□□□□□ -0.37
FAM239A-203ENST00000456563 DAD1P61803 113 aa12.71□□□□□ -0.37
FAM239A-203ENST00000456563 TMEM241Q24JQ0 296 aa12.71□□□□□ -0.37
FAM239A-203ENST00000456563 LGALS9BQ3B8N2 356 aa12.71□□□□□ -0.37
FAM239A-203ENST00000456563 LINC01551Q86U37 167 aa12.71□□□□□ -0.37
FAM239A-203ENST00000456563 C9orf85Q96MD7 179 aa12.71□□□□□ -0.37
FAM239A-203ENST00000456563 ASIPP42127 132 aa12.7□□□□□ -0.38
FAM239A-203ENST00000456563 TMSB15BA0A087X1C1 80 aa12.69□□□□□ -0.38
FAM239A-203ENST00000456563 P01737 135 aa12.69□□□□□ -0.38
FAM239A-203ENST00000456563 SFTA3P0C7M3 94 aa12.69□□□□□ -0.38
FAM239A-203ENST00000456563 DEFB130BP0DP73 79 aa12.69□□□□□ -0.38
FAM239A-203ENST00000456563 DEFB130AP0DP74 79 aa12.69□□□□□ -0.38
FAM239A-203ENST00000456563 S100A4P26447 101 aaKnown RBP12.69□□□□□ -0.38
FAM239A-203ENST00000456563 RPL19P84098 196 aaKnown RBP12.69□□□□□ -0.38
FAM239A-203ENST00000456563 Q6ZTC4 211 aa12.69□□□□□ -0.38
FAM239A-203ENST00000456563 Q6ZTI0 123 aa12.69□□□□□ -0.38
FAM239A-203ENST00000456563 COMMD7Q86VX2 200 aa12.69□□□□□ -0.38
FAM239A-203ENST00000456563 NUDT10Q8NFP7 164 aa12.69□□□□□ -0.38
FAM239A-203ENST00000456563 NUDT11Q96G61 164 aa12.69□□□□□ -0.38
FAM239A-203ENST00000456563 IL36BQ9NZH7 164 aa12.69□□□□□ -0.38
FAM239A-203ENST00000456563 NAT8Q9UHE5 227 aa12.69□□□□□ -0.38
FAM239A-203ENST00000456563 TRGV1A0A0A0MS02 117 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 GAGE12BA1L429 117 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 GRIFINA4D1Z8 144 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 M0R2P5 195 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 GAGE7O76087 117 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 GAGE12FP0CL80 117 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 GAGE12GP0CL81 117 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 GAGE12IP0CL82 117 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 FAM231DQ6ZW35 169 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 OR2D3Q8NGH3 330 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 RASL10AQ92737 203 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 PTH2Q96A98 100 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 C18orf15Q96N68 181 aa12.68□□□□□ -0.38
FAM239A-203ENST00000456563 MED14OSP0DP75 135 aa12.67□□□□□ -0.38
FAM239A-203ENST00000456563 RPS20P60866 119 aaKnown RBP12.67□□□□□ -0.38
FAM239A-203ENST00000456563 RPL23P62829 140 aaKnown RBP12.67□□□□□ -0.38
FAM239A-203ENST00000456563 PHLDA1Q8WV24 401 aaPredicted RBP12.67□□□□□ -0.38
FAM239A-203ENST00000456563 RNASE7Q9H1E1 156 aaKnown RBP12.67□□□□□ -0.38
FAM239A-203ENST00000456563 MRPL16Q9NX20 251 aaKnown RBP12.67□□□□□ -0.38
FAM239A-203ENST00000456563 TRAV10A0A0B4J240 114 aa12.66□□□□□ -0.38
FAM239A-203ENST00000456563 C3orf84H3BNL1 204 aa12.66□□□□□ -0.38
FAM239A-203ENST00000456563 H3BVH4 76 aa12.66□□□□□ -0.38
FAM239A-203ENST00000456563 ARMS2P0C7Q2 107 aa12.66□□□□□ -0.38
FAM239A-203ENST00000456563 SCRT2Q9NQ03 307 aa12.66□□□□□ -0.38
FAM239A-203ENST00000456563 XKRY2A2RUG3 117 aa12.65□□□□□ -0.38
FAM239A-203ENST00000456563 ISOC2Q96AB3 205 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms