RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 FOXC1Q12948 553 aa7.52□□□□□ -1.21
LINC01940-201ENST00000455228 LINC00574Q9H8X3 128 aa7.52□□□□□ -1.21
LINC01940-201ENST00000455228 ZNF492Q9P255 531 aa7.52□□□□□ -1.21
LINC01940-201ENST00000455228 PKDREJQ9NTG1 2253 aa7.52□□□□□ -1.21
LINC01940-201ENST00000455228 TECTAO75443 2155 aa7.52□□□□□ -1.21
LINC01940-201ENST00000455228 IGLV3-9A0A075B6K5 115 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 LGALS9O00182 355 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 IL17RELQ6ZVW7 336 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 SRSF12Q8WXF0 261 aaKnown RBP7.51□□□□□ -1.21
LINC01940-201ENST00000455228 A0A1B0GUT8 65 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 INS-IGF2F8WCM5 200 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 SCGB1C2P0DMR2 95 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 TMEM200BQ69YZ2 307 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 FAM19A4Q96LR4 140 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 IGKV2D-26A0A0A0MRZ7 120 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 TMEM178BH3BS89 294 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 FSTL3O95633 263 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 NBL1P41271 181 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 RIGQ13278 110 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 C10orf126Q8N4M7 172 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 TIMD4Q96H15 378 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 TPSG1Q9NRR2 321 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 LOC400499M0QZD8 3231 aa7.51□□□□□ -1.21
LINC01940-201ENST00000455228 COL27A1Q8IZC6 1860 aaPredicted RBP7.5□□□□□ -1.21
LINC01940-201ENST00000455228 EXOC3-AS1Q8N2X6 119 aa7.5□□□□□ -1.21
LINC01940-201ENST00000455228 OR8A1Q8NGG7 326 aa7.5□□□□□ -1.21
LINC01940-201ENST00000455228 IFI27L1Q96BM0 104 aa7.5□□□□□ -1.21
LINC01940-201ENST00000455228 CGB1A6NKQ9 187 aa7.5□□□□□ -1.21
LINC01940-201ENST00000455228 EFNA4P52798 201 aa7.5□□□□□ -1.21
LINC01940-201ENST00000455228 PIEZO1Q92508 2521 aa7.5□□□□□ -1.21
LINC01940-201ENST00000455228 NDUFB3O43676 98 aa7.5□□□□□ -1.21
LINC01940-201ENST00000455228 RPL27AP46776 148 aaKnown RBP7.5□□□□□ -1.21
LINC01940-201ENST00000455228 Q86TA4 180 aa7.5□□□□□ -1.21
LINC01940-201ENST00000455228 CCL17Q92583 94 aa7.5□□□□□ -1.21
LINC01940-201ENST00000455228 SLC25A39Q9BZJ4 359 aaPredicted RBP7.5□□□□□ -1.21
LINC01940-201ENST00000455228 GP9P14770 177 aa7.49□□□□□ -1.21
LINC01940-201ENST00000455228 GAGE2AQ6NT46 116 aa7.49□□□□□ -1.21
LINC01940-201ENST00000455228 SHANK2-AS3Q9BTD1 123 aa7.49□□□□□ -1.21
LINC01940-201ENST00000455228 OTORQ9NRC9 128 aa7.49□□□□□ -1.21
LINC01940-201ENST00000455228 HOXA3O43365 443 aaPredicted RBP7.49□□□□□ -1.21
LINC01940-201ENST00000455228 ARMS2P0C7Q2 107 aa7.49□□□□□ -1.21
LINC01940-201ENST00000455228 PRB4P10163 310 aaPredicted RBP7.49□□□□□ -1.21
LINC01940-201ENST00000455228 Q8N1Y9 231 aa7.49□□□□□ -1.21
LINC01940-201ENST00000455228 AGPAT4-IT1Q9H0P7 198 aa7.49□□□□□ -1.21
LINC01940-201ENST00000455228 LOC389332A0A1B0GUA5 103 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.48□□□□□ -1.21
LINC01940-201ENST00000455228 CDX4O14627 284 aaPredicted RBP7.48□□□□□ -1.21
LINC01940-201ENST00000455228 TCL1BO95988 128 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 FAM27E3Q08E93 113 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 ZNF318Q5VUA4 2279 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 RUSC1-AS1Q66K80 236 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 SEM1Q6ZVN7 128 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 TRAV2A0A0B4J234 112 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 ZNF785A8K8V0 405 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 IGLV2-23P01705 113 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 IL4P05112 153 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 DEFB109BQ30KR1 87 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 C1orf195Q5TG92 126 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 MBD3L2Q8NHZ7 208 aaPredicted RBP7.48□□□□□ -1.21
LINC01940-201ENST00000455228 KLK5Q9Y337 293 aaPredicted RBP7.48□□□□□ -1.21
LINC01940-201ENST00000455228 DPM2O94777 84 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 AVPP01185 164 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 CD40P25942 277 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 VKORC1Q9BQB6 163 aa7.48□□□□□ -1.21
LINC01940-201ENST00000455228 PLGLAQ15195 96 aa7.47□□□□□ -1.21
LINC01940-201ENST00000455228 PCNX1Q96RV3 2341 aa7.47□□□□□ -1.21
LINC01940-201ENST00000455228 KLK10O43240 276 aa7.47□□□□□ -1.21
LINC01940-201ENST00000455228 SPTBN4Q9H254 2564 aa7.46□□□□□ -1.21
LINC01940-201ENST00000455228 CD3EP07766 207 aa7.46□□□□□ -1.21
LINC01940-201ENST00000455228 PFN2P35080 140 aa7.46□□□□□ -1.21
LINC01940-201ENST00000455228 LOXL1Q08397 574 aaPredicted RBP7.46□□□□□ -1.21
LINC01940-201ENST00000455228 TMSB15BA0A087X1C1 80 aa7.46□□□□□ -1.22
LINC01940-201ENST00000455228 TRAV8-4A0A0B4J246 113 aa7.46□□□□□ -1.22
LINC01940-201ENST00000455228 IGKCP01834 107 aa7.46□□□□□ -1.22
LINC01940-201ENST00000455228 ACYP1P07311 99 aa7.46□□□□□ -1.22
LINC01940-201ENST00000455228 IFI27P40305 119 aaPredicted RBP7.46□□□□□ -1.22
LINC01940-201ENST00000455228 TMEM170BQ5T4T1 132 aa7.46□□□□□ -1.22
LINC01940-201ENST00000455228 TRAV8-2A0A0B4J237 113 aa7.46□□□□□ -1.22
LINC01940-201ENST00000455228 C17orf100A8MU93 164 aa7.46□□□□□ -1.22
LINC01940-201ENST00000455228 TRACP01848 142 aa7.46□□□□□ -1.22
LINC01940-201ENST00000455228 ZNF414Q96IQ9 312 aa7.46□□□□□ -1.22
LINC01940-201ENST00000455228 LYPD2Q6UXB3 125 aa7.45□□□□□ -1.22
LINC01940-201ENST00000455228 NEXN-AS1Q8NBZ9 246 aa7.45□□□□□ -1.22
LINC01940-201ENST00000455228 SLC25A20O43772 301 aa7.45□□□□□ -1.22
LINC01940-201ENST00000455228 ELANEP08246 267 aa7.45□□□□□ -1.22
LINC01940-201ENST00000455228 CACNG7P62955 275 aa7.45□□□□□ -1.22
LINC01940-201ENST00000455228 C3orf36Q3SXR2 165 aa7.45□□□□□ -1.22
LINC01940-201ENST00000455228 ZFP2Q6ZN57 461 aa7.45□□□□□ -1.22
LINC01940-201ENST00000455228 C22orf34Q6ZV56 151 aa7.45□□□□□ -1.22
LINC01940-201ENST00000455228 BOD1L1Q8NFC6 3051 aa7.45□□□□□ -1.22
LINC01940-201ENST00000455228 TMEM89A2RUT3 159 aa7.44□□□□□ -1.22
LINC01940-201ENST00000455228 D6R8Y8 96 aa7.44□□□□□ -1.22
LINC01940-201ENST00000455228 PRB3Q04118 309 aaPredicted RBP7.44□□□□□ -1.22
LINC01940-201ENST00000455228 IGFL2Q6UWQ7 119 aa7.44□□□□□ -1.22
LINC01940-201ENST00000455228 LINC00311Q8N616 119 aa7.44□□□□□ -1.22
LINC01940-201ENST00000455228 C3orf56Q8N813 242 aa7.44□□□□□ -1.22
LINC01940-201ENST00000455228 F11RQ9Y624 299 aaKnown RBP7.44□□□□□ -1.22
LINC01940-201ENST00000455228 ASPMQ8IZT6 3477 aa7.44□□□□□ -1.22
LINC01940-201ENST00000455228 IGLV2-11P01706 119 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms