RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 MIFP14174 115 aa11.19□□□□□ -0.62
VCX3B-204ENST00000453306 ZNF674Q2M3X9 581 aa11.19□□□□□ -0.62
VCX3B-204ENST00000453306 OCC1Q8TAD7 63 aa11.19□□□□□ -0.62
VCX3B-204ENST00000453306 RNASE8Q8TDE3 154 aaKnown RBP11.19□□□□□ -0.62
VCX3B-204ENST00000453306 PYGO2Q9BRQ0 406 aa11.19□□□□□ -0.62
VCX3B-204ENST00000453306 ALMS1Q8TCU4 4167 aa11.18□□□□□ -0.62
VCX3B-204ENST00000453306 IGHV1OR15-1A0A075B7D0 117 aa11.18□□□□□ -0.62
VCX3B-204ENST00000453306 TRAV21A0A0B4J279 112 aa11.18□□□□□ -0.62
VCX3B-204ENST00000453306 SMIM9A6NGZ8 99 aa11.18□□□□□ -0.62
VCX3B-204ENST00000453306 K7EN84 100 aa11.18□□□□□ -0.62
VCX3B-204ENST00000453306 PFN1P07737 140 aaKnown RBP11.18□□□□□ -0.62
VCX3B-204ENST00000453306 CEBPGP53567 150 aa11.18□□□□□ -0.62
VCX3B-204ENST00000453306 OR5I1Q13606 314 aa11.18□□□□□ -0.62
VCX3B-204ENST00000453306 PEA15Q15121 130 aa11.18□□□□□ -0.62
VCX3B-204ENST00000453306 RRN3P1Q2M238 152 aa11.18□□□□□ -0.62
VCX3B-204ENST00000453306 C11orf72Q8NBR9 251 aa11.18□□□□□ -0.62
VCX3B-204ENST00000453306 MDFICQ9P1T7 246 aa11.18□□□□□ -0.62
VCX3B-204ENST00000453306 CELA1Q9UNI1 258 aa11.18□□□□□ -0.62
VCX3B-204ENST00000453306 LINC00862A6NCI5 91 aa11.17□□□□□ -0.62
VCX3B-204ENST00000453306 TDRG1Q3Y452 100 aa11.17□□□□□ -0.62
VCX3B-204ENST00000453306 FABP5P3A8MUU1 101 aa11.16□□□□□ -0.62
VCX3B-204ENST00000453306 C9JCJ5 164 aa11.16□□□□□ -0.62
VCX3B-204ENST00000453306 GNG4P50150 75 aa11.16□□□□□ -0.62
VCX3B-204ENST00000453306 EMP1P54849 157 aa11.16□□□□□ -0.62
VCX3B-204ENST00000453306 EIF4E3Q8N5X7 224 aaKnown RBP11.16□□□□□ -0.62
VCX3B-204ENST00000453306 C11orf68Q9H3H3 251 aaKnown RBP11.16□□□□□ -0.62
VCX3B-204ENST00000453306 GSN-AS1Q9NRJ2 163 aa11.16□□□□□ -0.62
VCX3B-204ENST00000453306 NAGKQ9UJ70 344 aa11.16□□□□□ -0.62
VCX3B-204ENST00000453306 IGHV3-16A0A0C4DH30 117 aa11.15□□□□□ -0.62
VCX3B-204ENST00000453306 C19orf71A6NCJ1 209 aa11.15□□□□□ -0.62
VCX3B-204ENST00000453306 TYMSP04818 313 aa11.15□□□□□ -0.62
VCX3B-204ENST00000453306 RPL19P84098 196 aaKnown RBP11.15□□□□□ -0.62
VCX3B-204ENST00000453306 SMDT1Q9H4I9 107 aa11.15□□□□□ -0.62
VCX3B-204ENST00000453306 CBY3A6NI87 242 aa11.14□□□□□ -0.63
VCX3B-204ENST00000453306 ZNF727A8MUV8 499 aa11.14□□□□□ -0.63
VCX3B-204ENST00000453306 KRBOX1C9JBD0 128 aa11.14□□□□□ -0.63
VCX3B-204ENST00000453306 M0R036 132 aa11.14□□□□□ -0.63
VCX3B-204ENST00000453306 MGST1P10620 155 aaKnown RBP11.14□□□□□ -0.63
VCX3B-204ENST00000453306 FAM162BQ5T6X4 162 aa11.14□□□□□ -0.63
VCX3B-204ENST00000453306 PRR27Q6MZM9 219 aa11.14□□□□□ -0.63
VCX3B-204ENST00000453306 TMEM263Q8WUH6 116 aaKnown RBP11.14□□□□□ -0.63
VCX3B-204ENST00000453306 SMIM7Q9BQ49 75 aa11.14□□□□□ -0.63
VCX3B-204ENST00000453306 DKK2Q9UBU2 259 aa11.14□□□□□ -0.63
VCX3B-204ENST00000453306 FAM222AQ5U5X8 452 aa11.13□□□□□ -0.63
VCX3B-204ENST00000453306 FAM159AQ6UWV7 190 aa11.13□□□□□ -0.63
VCX3B-204ENST00000453306 ZNF493Q6ZR52 646 aa11.13□□□□□ -0.63
VCX3B-204ENST00000453306 COMMD7Q86VX2 200 aa11.13□□□□□ -0.63
VCX3B-204ENST00000453306 PHLDA1Q8WV24 401 aaPredicted RBP11.13□□□□□ -0.63
VCX3B-204ENST00000453306 TMSB15BA0A087X1C1 80 aa11.12□□□□□ -0.63
VCX3B-204ENST00000453306 GRIFINA4D1Z8 144 aa11.12□□□□□ -0.63
VCX3B-204ENST00000453306 ORM1P02763 201 aa11.12□□□□□ -0.63
VCX3B-204ENST00000453306 RNASE3P12724 160 aaKnown RBP11.12□□□□□ -0.63
VCX3B-204ENST00000453306 NANOS2P60321 138 aaKnown RBP11.12□□□□□ -0.63
VCX3B-204ENST00000453306 C12orf74Q32Q52 190 aa11.12□□□□□ -0.63
VCX3B-204ENST00000453306 LGALS9CQ6DKI2 356 aa11.12□□□□□ -0.63
VCX3B-204ENST00000453306 LINC01551Q86U37 167 aa11.12□□□□□ -0.63
VCX3B-204ENST00000453306 SMIM12Q96EX1 92 aa11.12□□□□□ -0.63
VCX3B-204ENST00000453306 C16orf74Q96GX8 76 aa11.12□□□□□ -0.63
VCX3B-204ENST00000453306 NOP10Q9NPE3 64 aaKnown RBP11.12□□□□□ -0.63
VCX3B-204ENST00000453306 SFTA3P0C7M3 94 aa11.11□□□□□ -0.63
VCX3B-204ENST00000453306 TCL1AP56279 114 aa11.11□□□□□ -0.63
VCX3B-204ENST00000453306 LINC01559Q495D7 138 aa11.11□□□□□ -0.63
VCX3B-204ENST00000453306 SOHLH1Q5JUK2 328 aa11.11□□□□□ -0.63
VCX3B-204ENST00000453306 LINC00612Q8N6U2 182 aa11.11□□□□□ -0.63
VCX3B-204ENST00000453306 NUDT10Q8NFP7 164 aa11.11□□□□□ -0.63
VCX3B-204ENST00000453306 NUDT11Q96G61 164 aa11.11□□□□□ -0.63
VCX3B-204ENST00000453306 RNASE7Q9H1E1 156 aaKnown RBP11.11□□□□□ -0.63
VCX3B-204ENST00000453306 TMEM189A5PLL7 270 aa11.1□□□□□ -0.63
VCX3B-204ENST00000453306 B4DEV8 164 aa11.1□□□□□ -0.63
VCX3B-204ENST00000453306 ADCYAP1P18509 176 aa11.1□□□□□ -0.63
VCX3B-204ENST00000453306 RPL23P62829 140 aaKnown RBP11.1□□□□□ -0.63
VCX3B-204ENST00000453306 DAZ2Q13117 558 aaKnown RBP11.1□□□□□ -0.63
VCX3B-204ENST00000453306 TMEM241Q24JQ0 296 aa11.1□□□□□ -0.63
VCX3B-204ENST00000453306 IBA57Q5T440 356 aaKnown RBP11.1□□□□□ -0.63
VCX3B-204ENST00000453306 SDF2L1Q9HCN8 221 aa11.1□□□□□ -0.63
VCX3B-204ENST00000453306 LY96Q9Y6Y9 160 aa11.1□□□□□ -0.63
VCX3B-204ENST00000453306 GZMBP10144 247 aa11.09□□□□□ -0.63
VCX3B-204ENST00000453306 FAM74A3Q4VXF1 159 aa11.09□□□□□ -0.63
VCX3B-204ENST00000453306 Q6ZTI0 123 aa11.09□□□□□ -0.63
VCX3B-204ENST00000453306 C11orf45Q8TAV5 145 aa11.09□□□□□ -0.63
VCX3B-204ENST00000453306 KCNS1Q96KK3 526 aa11.09□□□□□ -0.63
VCX3B-204ENST00000453306 C9orf85Q96MD7 179 aa11.09□□□□□ -0.63
VCX3B-204ENST00000453306 TIMM8BQ9Y5J9 83 aaPredicted RBP11.09□□□□□ -0.63
VCX3B-204ENST00000453306 TRGV11A0A075B6L2 103 aa11.08□□□□□ -0.64
VCX3B-204ENST00000453306 TMEM218A2RU14 115 aa11.08□□□□□ -0.64
VCX3B-204ENST00000453306 SPINK4O60575 86 aa11.08□□□□□ -0.64
VCX3B-204ENST00000453306 DNLZQ5SXM8 178 aa11.08□□□□□ -0.64
VCX3B-204ENST00000453306 UQCC3Q6UW78 93 aa11.08□□□□□ -0.64
VCX3B-204ENST00000453306 SPART-AS1P0CW21 52 aa11.07□□□□□ -0.64
VCX3B-204ENST00000453306 TCTAP57738 103 aa11.07□□□□□ -0.64
VCX3B-204ENST00000453306 ISOC2Q96AB3 205 aa11.07□□□□□ -0.64
VCX3B-204ENST00000453306 SCRT2Q9NQ03 307 aa11.07□□□□□ -0.64
VCX3B-204ENST00000453306 MRPL16Q9NX20 251 aaKnown RBP11.07□□□□□ -0.64
VCX3B-204ENST00000453306 NAT8Q9UHE5 227 aa11.07□□□□□ -0.64
VCX3B-204ENST00000453306 GAGE12BA1L429 117 aa11.06□□□□□ -0.64
VCX3B-204ENST00000453306 LYRM9A8MSI8 78 aa11.06□□□□□ -0.64
VCX3B-204ENST00000453306 GAGE7O76087 117 aa11.06□□□□□ -0.64
VCX3B-204ENST00000453306 ARMS2P0C7Q2 107 aa11.06□□□□□ -0.64
VCX3B-204ENST00000453306 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
VCX3B-204ENST00000453306 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms