RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 IBA57Q5T440 356 aaKnown RBP8.53□□□□□ -1.04
LINC00339-205ENST00000452322 SDF2L1Q9HCN8 221 aa8.53□□□□□ -1.04
LINC00339-205ENST00000452322 C11orf21Q9P2W6 132 aa8.53□□□□□ -1.04
LINC00339-205ENST00000452322 TP53TG3Q9ULZ0 132 aa8.53□□□□□ -1.04
LINC00339-205ENST00000452322 TEX48A0A1B0GUV7 120 aa8.52□□□□□ -1.05
LINC00339-205ENST00000452322 EMP1P54849 157 aa8.52□□□□□ -1.05
LINC00339-205ENST00000452322 C11orf72Q8NBR9 251 aa8.52□□□□□ -1.05
LINC00339-205ENST00000452322 SMIM7Q9BQ49 75 aa8.52□□□□□ -1.05
LINC00339-205ENST00000452322 BIN3Q9NQY0 253 aa8.52□□□□□ -1.05
LINC00339-205ENST00000452322 IGKV3D-20A0A0C4DH25 116 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 PGPEP1LA6NFU8 196 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 LYRM9A8MSI8 78 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 ZNF727A8MUV8 499 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 SNURFLB1AK76 121 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 TYMSP04818 313 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 MGST1P10620 155 aaKnown RBP8.51□□□□□ -1.05
LINC00339-205ENST00000452322 ZNF415Q09FC8 603 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 FAM74A3Q4VXF1 159 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 PRR27Q6MZM9 219 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 IL17DQ8TAD2 202 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 WWC2-AS2Q96NR7 200 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 DKK2Q9UBU2 259 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 TIMM8BQ9Y5J9 83 aaPredicted RBP8.51□□□□□ -1.05
LINC00339-205ENST00000452322 LY96Q9Y6Y9 160 aa8.51□□□□□ -1.05
LINC00339-205ENST00000452322 CXorf65A6NEN9 183 aa8.5□□□□□ -1.05
LINC00339-205ENST00000452322 ORM1P02763 201 aa8.5□□□□□ -1.05
LINC00339-205ENST00000452322 SPART-AS1P0CW21 52 aa8.5□□□□□ -1.05
LINC00339-205ENST00000452322 TCL1AP56279 114 aa8.5□□□□□ -1.05
LINC00339-205ENST00000452322 DAZ2Q13117 558 aaKnown RBP8.5□□□□□ -1.05
LINC00339-205ENST00000452322 LINC01559Q495D7 138 aa8.5□□□□□ -1.05
LINC00339-205ENST00000452322 FAM222AQ5U5X8 452 aa8.5□□□□□ -1.05
LINC00339-205ENST00000452322 OCC1Q8TAD7 63 aa8.5□□□□□ -1.05
LINC00339-205ENST00000452322 C11orf45Q8TAV5 145 aa8.5□□□□□ -1.05
LINC00339-205ENST00000452322 CELA1Q9UNI1 258 aa8.5□□□□□ -1.05
LINC00339-205ENST00000452322 IGHV3-16A0A0C4DH30 117 aa8.49□□□□□ -1.05
LINC00339-205ENST00000452322 LINC00862A6NCI5 91 aa8.49□□□□□ -1.05
LINC00339-205ENST00000452322 C19orf71A6NCJ1 209 aa8.49□□□□□ -1.05
LINC00339-205ENST00000452322 B4DEV8 164 aa8.49□□□□□ -1.05
LINC00339-205ENST00000452322 KRBOX1C9JBD0 128 aa8.49□□□□□ -1.05
LINC00339-205ENST00000452322 M0R036 132 aa8.49□□□□□ -1.05
LINC00339-205ENST00000452322 GNRH2O43555 120 aa8.49□□□□□ -1.05
LINC00339-205ENST00000452322 SOHLH1Q5JUK2 328 aa8.49□□□□□ -1.05
LINC00339-205ENST00000452322 UQCC3Q6UW78 93 aa8.49□□□□□ -1.05
LINC00339-205ENST00000452322 NOP10Q9NPE3 64 aaKnown RBP8.49□□□□□ -1.05
LINC00339-205ENST00000452322 GSN-AS1Q9NRJ2 163 aa8.49□□□□□ -1.05
LINC00339-205ENST00000452322 MDFICQ9P1T7 246 aa8.49□□□□□ -1.05
LINC00339-205ENST00000452322 K7EN84 100 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 OR5I1Q13606 314 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 LINC01551Q86U37 167 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 DAZAP1Q96EP5 407 aaKnown RBP8.48□□□□□ -1.05
LINC00339-205ENST00000452322 STARD9Q9P2P6 4700 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 SPINK4O60575 86 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 CXCL1P09341 107 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 SFTA3P0C7M3 94 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 ASIPP42127 132 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 NANOS2P60321 138 aaKnown RBP8.48□□□□□ -1.05
LINC00339-205ENST00000452322 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 DNLZQ5SXM8 178 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 COMMD7Q86VX2 200 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 SPXQ9BT56 116 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 NAT8Q9UHE5 227 aa8.48□□□□□ -1.05
LINC00339-205ENST00000452322 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
LINC00339-205ENST00000452322 TMSB15BA0A087X1C1 80 aa8.47□□□□□ -1.05
LINC00339-205ENST00000452322 P01737 135 aa8.47□□□□□ -1.05
LINC00339-205ENST00000452322 RNASE3P12724 160 aaKnown RBP8.47□□□□□ -1.05
LINC00339-205ENST00000452322 S100A4P26447 101 aaKnown RBP8.47□□□□□ -1.05
LINC00339-205ENST00000452322 RPL19P84098 196 aaKnown RBP8.47□□□□□ -1.05
LINC00339-205ENST00000452322 C12orf74Q32Q52 190 aa8.47□□□□□ -1.05
LINC00339-205ENST00000452322 LGALS9BQ3B8N2 356 aa8.47□□□□□ -1.05
LINC00339-205ENST00000452322 FAM231DQ6ZW35 169 aa8.47□□□□□ -1.05
LINC00339-205ENST00000452322 ZNF575Q86XF7 245 aa8.47□□□□□ -1.05
LINC00339-205ENST00000452322 C9orf85Q96MD7 179 aa8.47□□□□□ -1.05
LINC00339-205ENST00000452322 GRIFINA4D1Z8 144 aa8.46□□□□□ -1.06
LINC00339-205ENST00000452322 RPS20P60866 119 aaKnown RBP8.46□□□□□ -1.06
LINC00339-205ENST00000452322 DAD1P61803 113 aa8.46□□□□□ -1.06
LINC00339-205ENST00000452322 RPL23P62829 140 aaKnown RBP8.46□□□□□ -1.06
LINC00339-205ENST00000452322 Q6ZTC4 211 aa8.46□□□□□ -1.06
LINC00339-205ENST00000452322 Q6ZTI0 123 aa8.46□□□□□ -1.06
LINC00339-205ENST00000452322 NUDT10Q8NFP7 164 aa8.46□□□□□ -1.06
LINC00339-205ENST00000452322 MUC7Q8TAX7 377 aa8.46□□□□□ -1.06
LINC00339-205ENST00000452322 NUDT11Q96G61 164 aa8.46□□□□□ -1.06
LINC00339-205ENST00000452322 RNASE7Q9H1E1 156 aaKnown RBP8.46□□□□□ -1.06
LINC00339-205ENST00000452322 IL36BQ9NZH7 164 aa8.46□□□□□ -1.06
LINC00339-205ENST00000452322 DYNC2H1Q8NCM8 4307 aaKnown RBP8.45□□□□□ -1.06
LINC00339-205ENST00000452322 TRGV1A0A0A0MS02 117 aa8.45□□□□□ -1.06
LINC00339-205ENST00000452322 M0R2P5 195 aa8.45□□□□□ -1.06
LINC00339-205ENST00000452322 DEFB130BP0DP73 79 aa8.45□□□□□ -1.06
LINC00339-205ENST00000452322 DEFB130AP0DP74 79 aa8.45□□□□□ -1.06
LINC00339-205ENST00000452322 MED14OSP0DP75 135 aa8.45□□□□□ -1.06
LINC00339-205ENST00000452322 OR2D3Q8NGH3 330 aa8.45□□□□□ -1.06
LINC00339-205ENST00000452322 RASL10AQ92737 203 aa8.45□□□□□ -1.06
LINC00339-205ENST00000452322 C18orf15Q96N68 181 aa8.45□□□□□ -1.06
LINC00339-205ENST00000452322 MRPL16Q9NX20 251 aaKnown RBP8.45□□□□□ -1.06
LINC00339-205ENST00000452322 GAGE12BA1L429 117 aa8.44□□□□□ -1.06
LINC00339-205ENST00000452322 TMEM218A2RU14 115 aa8.44□□□□□ -1.06
LINC00339-205ENST00000452322 XKRY2A2RUG3 117 aa8.44□□□□□ -1.06
LINC00339-205ENST00000452322 H3BVH4 76 aa8.44□□□□□ -1.06
LINC00339-205ENST00000452322 GAGE7O76087 117 aa8.44□□□□□ -1.06
LINC00339-205ENST00000452322 ARMS2P0C7Q2 107 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms