RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TAS2R60P59551 318 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 IQCJQ1A5X6 159 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 CASC10Q5T4H9 136 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 TMEM78Q5T7P6 136 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 RASL11AQ6T310 242 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 C1orf158Q8N1D5 194 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 ARL6IP6Q8N6S5 226 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 C11orf45Q8TAV5 145 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 CMTM2Q8TAZ6 248 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 ODF3Q96PU9 254 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 LINC01587Q99440 93 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 C20orf144Q9BQM9 153 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 Q9H3A6 140 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 OTORQ9NRC9 128 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 OSTCQ9NRP0 149 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 IL36BQ9NZH7 164 aa6.43□□□□□ -1.38
COL8A1-203ENST00000452013 TGP01266 2768 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 LINC00587B1AMM8 73 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 DEFB4AO15263 64 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 RBMY1A1P0DJD3 496 aaKnown RBP6.42□□□□□ -1.38
COL8A1-203ENST00000452013 RBMY1CP0DJD4 496 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 CT45A10P0DMU9 189 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 ESDP10768 282 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 FABP4P15090 132 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 RBMY1FQ15415 496 aaKnown RBP6.42□□□□□ -1.38
COL8A1-203ENST00000452013 RRN3P1Q2M238 152 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 ZFAND6Q6FIF0 208 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 C9orf47Q6ZRZ4 202 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 MRPL52Q86TS9 123 aaKnown RBP6.42□□□□□ -1.38
COL8A1-203ENST00000452013 TMEM256Q8N2U0 113 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 Q8NAQ8 132 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 AGPAT4-IT1Q9H0P7 198 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 TRAPPC1Q9Y5R8 145 aa6.42□□□□□ -1.38
COL8A1-203ENST00000452013 HUWE1Q7Z6Z7 4374 aaKnown RBP6.42□□□□□ -1.38
COL8A1-203ENST00000452013 TRAV12-2A0A075B6T6 113 aa6.41□□□□□ -1.38
COL8A1-203ENST00000452013 RBAKDNA6NC62 111 aa6.41□□□□□ -1.38
COL8A1-203ENST00000452013 CRXO43186 299 aaPredicted RBP6.41□□□□□ -1.38
COL8A1-203ENST00000452013 SLC25A5P05141 298 aaKnown RBP6.41□□□□□ -1.38
COL8A1-203ENST00000452013 SPART-AS1P0CW21 52 aa6.41□□□□□ -1.38
COL8A1-203ENST00000452013 PRB4P10163 310 aaPredicted RBP6.41□□□□□ -1.38
COL8A1-203ENST00000452013 ATP5G3P48201 142 aa6.41□□□□□ -1.38
COL8A1-203ENST00000452013 GNG4P50150 75 aa6.41□□□□□ -1.38
COL8A1-203ENST00000452013 ERCC8Q13216 396 aa6.41□□□□□ -1.38
COL8A1-203ENST00000452013 GNB1LQ9BYB4 327 aa6.41□□□□□ -1.38
COL8A1-203ENST00000452013 KLK5Q9Y337 293 aaPredicted RBP6.41□□□□□ -1.38
COL8A1-203ENST00000452013 IGKV2-40A0A087WW87 121 aaPredicted RBP6.4□□□□□ -1.38
COL8A1-203ENST00000452013 TRBV7-9A0A0J9YWB2 115 aa6.4□□□□□ -1.38
COL8A1-203ENST00000452013 TEX48A0A1B0GUV7 120 aa6.4□□□□□ -1.38
COL8A1-203ENST00000452013 DIRC3C9JPN6 131 aa6.4□□□□□ -1.38
COL8A1-203ENST00000452013 IGKV2D-40P01614 121 aaPredicted RBP6.4□□□□□ -1.38
COL8A1-203ENST00000452013 GPX1P07203 203 aa6.4□□□□□ -1.38
COL8A1-203ENST00000452013 ZNF138P52744 262 aa6.4□□□□□ -1.38
COL8A1-203ENST00000452013 UBE2G2P60604 165 aa6.4□□□□□ -1.38
COL8A1-203ENST00000452013 Q0VG73 95 aa6.4□□□□□ -1.38
COL8A1-203ENST00000452013 CEMP1Q6PRD7 247 aaPredicted RBP6.4□□□□□ -1.38
COL8A1-203ENST00000452013 ZNF492Q9P255 531 aa6.4□□□□□ -1.38
COL8A1-203ENST00000452013 SERTM2A0A1B0GWG4 89 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 SCO2A0A1W2PP80 73 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 NUPR2A6NF83 97 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 ZNF705GA8MUZ8 300 aaPredicted RBP6.39□□□□□ -1.39
COL8A1-203ENST00000452013 K7EQM0 130 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 HTN1P15515 57 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 CRISP2P16562 243 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 EMP1P54849 157 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 NANOS2P60321 138 aaKnown RBP6.39□□□□□ -1.39
COL8A1-203ENST00000452013 SUMO1P63165 101 aaKnown RBP6.39□□□□□ -1.39
COL8A1-203ENST00000452013 FAM162BQ5T6X4 162 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 GFI1BQ5VTD9 330 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 DMRTA1Q5VZB9 504 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 ZNF493Q6ZR52 646 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 FAM231DQ6ZW35 169 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 OCC1Q8TAD7 63 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 PHLDA1Q8WV24 401 aaPredicted RBP6.39□□□□□ -1.39
COL8A1-203ENST00000452013 FAM19A4Q96LR4 140 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 VGLL1Q99990 258 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 YTHDF2Q9Y5A9 579 aaKnown RBP6.39□□□□□ -1.39
COL8A1-203ENST00000452013 LENEPQ9Y5L5 61 aa6.39□□□□□ -1.39
COL8A1-203ENST00000452013 TRAV12-3A0A0B4J271 114 aa6.38□□□□□ -1.39
COL8A1-203ENST00000452013 C7orf71A4D174 169 aa6.38□□□□□ -1.39
COL8A1-203ENST00000452013 J3KRW8 73 aa6.38□□□□□ -1.39
COL8A1-203ENST00000452013 HLA-DQA1P01909 254 aa6.38□□□□□ -1.39
COL8A1-203ENST00000452013 GZMBP10144 247 aa6.38□□□□□ -1.39
COL8A1-203ENST00000452013 DDTP30046 118 aa6.38□□□□□ -1.39
COL8A1-203ENST00000452013 RNASE4P34096 147 aaKnown RBP6.38□□□□□ -1.39
COL8A1-203ENST00000452013 ERVFC1-1P60608 527 aa6.38□□□□□ -1.39
COL8A1-203ENST00000452013 OR10J3Q5JRS4 329 aa6.38□□□□□ -1.39
COL8A1-203ENST00000452013 C5orf17Q8NAS9 161 aa6.38□□□□□ -1.39
COL8A1-203ENST00000452013 EPDR1Q9UM22 224 aa6.38□□□□□ -1.39
COL8A1-203ENST00000452013 RPH3ALQ9UNE2 315 aa6.38□□□□□ -1.39
COL8A1-203ENST00000452013 COL7A1Q02388 2944 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 TRBV20OR9-2A0A075B6H5 130 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 FBLL1A6NHQ2 334 aaKnown RBP6.37□□□□□ -1.39
COL8A1-203ENST00000452013 KLLNB2CW77 178 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 AZU1P20160 251 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 RAB4BP61018 213 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 SSTP61278 116 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 KIR3DS1Q14943 382 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 CENPWQ5EE01 88 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 GOLT1AQ6ZVE7 132 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 C16orf74Q96GX8 76 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms