RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 MRPS16Q9Y3D3 137 aaKnown RBP6.69□□□□□ -1.34
USP54-207ENST00000451492 KIAA1109Q2LD37 5005 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 TRAV34A0A0B4J273 112 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 IGHV3-16A0A0C4DH30 117 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 CTXND1A0A1B0GTU2 59 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 C9JCJ5 164 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 H3BNG1 76 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 GCGP01275 180 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 IFNA7P01567 189 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 CRYBA4P53673 196 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 FLI1Q01543 452 aaPredicted RBP6.68□□□□□ -1.34
USP54-207ENST00000451492 FHL2Q14192 279 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 CYB561D1Q8N8Q1 229 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 PCNPQ8WW12 178 aaKnown RBP6.68□□□□□ -1.34
USP54-207ENST00000451492 LINC00479Q96M42 142 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 C18orf15Q96N68 181 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 PRO0255Q9UI72 69 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 HHLA3Q9XRX5 114 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 DNAH11Q96DT5 4516 aa6.68□□□□□ -1.34
USP54-207ENST00000451492 DYNC1H1Q14204 4646 aaKnown RBP6.67□□□□□ -1.34
USP54-207ENST00000451492 A0A1B0GV50 99 aa6.67□□□□□ -1.34
USP54-207ENST00000451492 SERTM2A0A1B0GWG4 89 aa6.67□□□□□ -1.34
USP54-207ENST00000451492 TTC32Q5I0X7 151 aa6.67□□□□□ -1.34
USP54-207ENST00000451492 OR4C5Q8NGB2 326 aa6.67□□□□□ -1.34
USP54-207ENST00000451492 SUN5Q8TC36 379 aa6.67□□□□□ -1.34
USP54-207ENST00000451492 SPXQ9BT56 116 aa6.67□□□□□ -1.34
USP54-207ENST00000451492 C11orf21Q9P2W6 132 aa6.67□□□□□ -1.34
USP54-207ENST00000451492 EPDR1Q9UM22 224 aa6.67□□□□□ -1.34
USP54-207ENST00000451492 IGHV3-73A0A0B4J1V6 119 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 TRAV4A0A0B4J268 109 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 LOC100131303A0A0U1RQF7 123 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 MAP1LC3B2A6NCE7 125 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 M0R2P5 195 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 NXPH4O95158 308 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 IGLV2-11P01706 119 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 GYPEP15421 78 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 SRIP30626 198 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 TDRG1Q3Y452 100 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 SMUG1Q53HV7 270 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 ARL6IP6Q8N6S5 226 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 KCNS1Q96KK3 526 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 UPK3BQ9BT76 320 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 MAP1LC3BQ9GZQ8 125 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 CYTL1Q9NRR1 136 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 ARL2-SNX15V9GYD0 113 aa6.66□□□□□ -1.34
USP54-207ENST00000451492 A0A1W2PRE2 83 aa6.65□□□□□ -1.34
USP54-207ENST00000451492 K7EQD1 137 aa6.65□□□□□ -1.34
USP54-207ENST00000451492 PEX7O00628 323 aa6.65□□□□□ -1.34
USP54-207ENST00000451492 TAAR5O14804 337 aa6.65□□□□□ -1.34
USP54-207ENST00000451492 SIVA1O15304 175 aa6.65□□□□□ -1.34
USP54-207ENST00000451492 PFN1P07737 140 aaKnown RBP6.65□□□□□ -1.34
USP54-207ENST00000451492 FHITP49789 147 aa6.65□□□□□ -1.34
USP54-207ENST00000451492 SLAQ13239 276 aa6.65□□□□□ -1.34
USP54-207ENST00000451492 MRPL23Q16540 153 aaKnown RBP6.65□□□□□ -1.34
USP54-207ENST00000451492 Q86TA4 180 aa6.65□□□□□ -1.34
USP54-207ENST00000451492 NHLRC2Q8NBF2 726 aa6.65□□□□□ -1.34
USP54-207ENST00000451492 RASL10AQ92737 203 aa6.65□□□□□ -1.34
USP54-207ENST00000451492 FAM74A7A6NL05 159 aa6.64□□□□□ -1.35
USP54-207ENST00000451492 C16orf90A8MZG2 172 aa6.64□□□□□ -1.35
USP54-207ENST00000451492 PPT1P50897 306 aa6.64□□□□□ -1.35
USP54-207ENST00000451492 LINC00315P59091 139 aa6.64□□□□□ -1.35
USP54-207ENST00000451492 UBE2G1P62253 170 aa6.64□□□□□ -1.35
USP54-207ENST00000451492 ZNF876PQ49A33 203 aa6.64□□□□□ -1.35
USP54-207ENST00000451492 LYPD5Q6UWN5 251 aa6.64□□□□□ -1.35
USP54-207ENST00000451492 DPPA3Q6W0C5 159 aa6.64□□□□□ -1.35
USP54-207ENST00000451492 NEGR1Q7Z3B1 354 aa6.64□□□□□ -1.35
USP54-207ENST00000451492 WFDC10BQ8IUB3 73 aa6.64□□□□□ -1.35
USP54-207ENST00000451492 ZNF471Q9BX82 626 aaPredicted RBP6.64□□□□□ -1.35
USP54-207ENST00000451492 PCLOQ9Y6V0 5065 aa6.64□□□□□ -1.35
USP54-207ENST00000451492 PGPEP1LA6NFU8 196 aa6.63□□□□□ -1.35
USP54-207ENST00000451492 FBLL1A6NHQ2 334 aaKnown RBP6.63□□□□□ -1.35
USP54-207ENST00000451492 M0R036 132 aa6.63□□□□□ -1.35
USP54-207ENST00000451492 S100A4P26447 101 aaKnown RBP6.63□□□□□ -1.35
USP54-207ENST00000451492 ZNF506Q5JVG8 444 aa6.63□□□□□ -1.35
USP54-207ENST00000451492 SAPCD1Q5SSQ6 148 aa6.63□□□□□ -1.35
USP54-207ENST00000451492 CST9LP1Q5W188 147 aa6.63□□□□□ -1.35
USP54-207ENST00000451492 KCNRGQ8N5I3 272 aa6.63□□□□□ -1.35
USP54-207ENST00000451492 OR11H4Q8NGC9 324 aa6.63□□□□□ -1.35
USP54-207ENST00000451492 FAM213BQ8TBF2 198 aa6.63□□□□□ -1.35
USP54-207ENST00000451492 TMSB15BA0A087X1C1 80 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 KANTRA0A1W2PQU2 76 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 B4DEV8 164 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 H3BVH4 76 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 BCL2L11O43521 198 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 PFDN1O60925 122 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 ORM1P02763 201 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 MED14OSP0DP75 135 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 RNASE3P12724 160 aaKnown RBP6.62□□□□□ -1.35
USP54-207ENST00000451492 ZNF345Q14585 488 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 CFAP126Q5VTH2 177 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 SPATA12Q7Z6I5 190 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 STOML3Q8TAV4 291 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 ZC2HC1AQ96GY0 325 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 C9orf85Q96MD7 179 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 TXNDC17Q9BRA2 123 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 TNFRSF18Q9Y5U5 241 aa6.62□□□□□ -1.35
USP54-207ENST00000451492 IGKV3D-20A0A0C4DH25 116 aa6.61□□□□□ -1.35
USP54-207ENST00000451492 A0A1W2PPQ1 181 aa6.61□□□□□ -1.35
USP54-207ENST00000451492 GRIFINA4D1Z8 144 aa6.61□□□□□ -1.35
USP54-207ENST00000451492 RS1O15537 224 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms