RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 J3QQQ9 107 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 HIST1H2BKO60814 126 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 HIST1H2BJP06899 126 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 HIST1H2BOP23527 126 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 HIST1H2BBP33778 126 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 HIST1H2BDP58876 126 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 HIST1H2BCP62807 126 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 HIST2H2BEQ16778 126 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 HIST1H2BHQ93079 126 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 HIST1H2BNQ99877 126 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 HIST1H2BMQ99879 126 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 C2orf70A6NJV1 201 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 RNASE13Q5GAN3 156 aaKnown RBP11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 GFI1Q99684 422 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 Q9H8V8 135 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 NRXN2Q9P2S2 1712 aa11.33□□□□□ -0.6
SMARCA2-214ENST00000450198 ETV2O00321 342 aaPredicted RBP11.32□□□□□ -0.6
SMARCA2-214ENST00000450198 PRSS57Q6UWY2 283 aa11.32□□□□□ -0.6
SMARCA2-214ENST00000450198 PCNX1Q96RV3 2341 aa11.32□□□□□ -0.6
SMARCA2-214ENST00000450198 A0A087X0K7 114 aa11.32□□□□□ -0.6
SMARCA2-214ENST00000450198 KLK12Q9UKR0 248 aa11.32□□□□□ -0.6
SMARCA2-214ENST00000450198 INAFM1C9JVW0 142 aa11.32□□□□□ -0.6
SMARCA2-214ENST00000450198 IGHV4-28A0A0C4DH34 117 aa11.32□□□□□ -0.6
SMARCA2-214ENST00000450198 FGF6P10767 208 aa11.32□□□□□ -0.6
SMARCA2-214ENST00000450198 GNRH2O43555 120 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 C3orf79P0CE67 100 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 SEM1Q6ZVN7 128 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 ZNF491Q8N8L2 437 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 NAA38Q9BRA0 125 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 PRO0255Q9UI72 69 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 K7EMT4 169 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 NFE4Q86UQ8 179 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 NPBQ8NG41 125 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 VSIG2Q96IQ7 327 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 C17orf77Q96MU5 243 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 OPRPNQ99935 248 aaPredicted RBP11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 C20orf144Q9BQM9 153 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 LOC285556D6RIA3 1793 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 A0A1B0GX51 115 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 DEFB4AO15263 64 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 PCP4P48539 62 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 PRORYQ9H606 182 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 PSME4Q14997 1843 aa11.31□□□□□ -0.6
SMARCA2-214ENST00000450198 F8VRH5 84 aa11.3□□□□□ -0.6
SMARCA2-214ENST00000450198 SPAG11BQ08648 103 aa11.3□□□□□ -0.6
SMARCA2-214ENST00000450198 PROK2Q9HC23 129 aa11.3□□□□□ -0.6
SMARCA2-214ENST00000450198 A0A0G2JRQ6 117 aa11.3□□□□□ -0.6
SMARCA2-214ENST00000450198 PRO1854Q9UHT4 67 aa11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 NOTCH3Q9UM47 2321 aa11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 IGKV2-24A0A0C4DH68 120 aa11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 C15orf65H3BRN8 121 aa11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 FHL1Q13642 323 aa11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 Q6ZRM9 215 aa11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 CTSZQ9UBR2 303 aa11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 QRFPP83859 136 aa11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 KLHDC3Q9BQ90 382 aa11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 ROS1P08922 2347 aa11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 ZNF236Q9UL36 1845 aa11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 WT1P19544 449 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 BAALCQ8WXS3 180 aa11.29□□□□□ -0.6
SMARCA2-214ENST00000450198 DIAPH2-AS1Q14236 149 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 NREPQ16612 68 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 ODF3L1Q8IXM7 274 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 AGPAT4-IT1Q9H0P7 198 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 H0YGX0 51 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 WDR86Q86TI4 376 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 COX7B2Q8TF08 81 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 CARD19Q96LW7 228 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 WNK2Q9Y3S1 2297 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 IGHV7-81A0A0B4J1V7 117 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 DYNAPQ8N1N2 210 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 HIST1H2BLQ99880 126 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 NBASA2RRP1 2371 aa11.28□□□□□ -0.6
SMARCA2-214ENST00000450198 C5orf56Q8N8D9 126 aa11.27□□□□□ -0.6
SMARCA2-214ENST00000450198 DEFB131BA0A096LNP1 70 aa11.27□□□□□ -0.6
SMARCA2-214ENST00000450198 H0Y9J4 135 aa11.27□□□□□ -0.6
SMARCA2-214ENST00000450198 CASC2Q6XLA1 102 aa11.27□□□□□ -0.6
SMARCA2-214ENST00000450198 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.27□□□□□ -0.613e-6■■■■■ 28.5
SMARCA2-214ENST00000450198 KIF26BQ2KJY2 2108 aa11.27□□□□□ -0.61
SMARCA2-214ENST00000450198 BTCP35070 178 aa11.27□□□□□ -0.61
SMARCA2-214ENST00000450198 PRR20EP86478 221 aa11.27□□□□□ -0.61
SMARCA2-214ENST00000450198 PRR20CP86479 221 aa11.27□□□□□ -0.61
SMARCA2-214ENST00000450198 PRR20DP86480 221 aa11.27□□□□□ -0.61
SMARCA2-214ENST00000450198 PRR20BP86481 221 aa11.27□□□□□ -0.61
SMARCA2-214ENST00000450198 PRR20AP86496 221 aa11.27□□□□□ -0.61
SMARCA2-214ENST00000450198 FAM231DQ6ZW35 169 aa11.27□□□□□ -0.61
SMARCA2-214ENST00000450198 TRBV7-3A0A075B6L6 115 aa11.27□□□□□ -0.61
SMARCA2-214ENST00000450198 PKDREJQ9NTG1 2253 aa11.27□□□□□ -0.61
SMARCA2-214ENST00000450198 PRSS47A8MTI9 375 aa11.26□□□□□ -0.61
SMARCA2-214ENST00000450198 POU2AF1Q16633 256 aa11.26□□□□□ -0.61
SMARCA2-214ENST00000450198 IGKV1-6A0A0C4DH72 117 aa11.26□□□□□ -0.61
SMARCA2-214ENST00000450198 C14orf132Q9NPU4 83 aa11.26□□□□□ -0.61
SMARCA2-214ENST00000450198 LRRK1Q38SD2 2015 aa11.26□□□□□ -0.61
SMARCA2-214ENST00000450198 ZNF581Q9P0T4 197 aa11.26□□□□□ -0.61
SMARCA2-214ENST00000450198 A0A087WZ39 114 aa11.25□□□□□ -0.61
SMARCA2-214ENST00000450198 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
SMARCA2-214ENST00000450198 SRSF3P84103 164 aaKnown RBP11.25□□□□□ -0.61
SMARCA2-214ENST00000450198 ZFP2Q6ZN57 461 aa11.25□□□□□ -0.61
SMARCA2-214ENST00000450198 UBE2D4Q9Y2X8 147 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms